RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 PARP4Q9UKK3 1724 aaKnown RBP15.11■□□□□ 0.01
PDGFRA-205ENST00000507536 KIAA0232Q92628 1395 aa15.11■□□□□ 0.01
PDGFRA-205ENST00000507536 DISP2A7MBM2 1401 aa15.1■□□□□ 0.01
PDGFRA-205ENST00000507536 IFNLR1Q8IU57 520 aaPredicted RBP15.1■□□□□ 0.01
PDGFRA-205ENST00000507536 SBF2Q86WG5 1849 aa15.1■□□□□ 0.01
PDGFRA-205ENST00000507536 CAMTA1Q9Y6Y1 1673 aa15.09■□□□□ 0.01
PDGFRA-205ENST00000507536 TRPM1Q7Z4N2 1603 aa15.09■□□□□ 0.01
PDGFRA-205ENST00000507536 AKAP12Q02952 1782 aa15.08■□□□□ 0.01
PDGFRA-205ENST00000507536 RGPD5Q99666 1765 aa15.08■□□□□ 0.01
PDGFRA-205ENST00000507536 FAM182BQ5T319 152 aa15.08■□□□□ 0
PDGFRA-205ENST00000507536 PIK3C2AO00443 1686 aa15.08■□□□□ 0
PDGFRA-205ENST00000507536 COL18A1P39060 1754 aa15.08■□□□□ 0
PDGFRA-205ENST00000507536 A0A0G2JS52 829 aa15.07■□□□□ 0
PDGFRA-205ENST00000507536 MYT1Q01538 1121 aa15.07■□□□□ 0
PDGFRA-205ENST00000507536 SF3B2Q13435 895 aaKnown RBP15.07■□□□□ 0
PDGFRA-205ENST00000507536 CDK19Q9BWU1 502 aa15.07■□□□□ 0
PDGFRA-205ENST00000507536 PRDM11Q9NQV5 511 aa15.07■□□□□ 0
PDGFRA-205ENST00000507536 ACEP12821 1306 aa15.07■□□□□ 0
PDGFRA-205ENST00000507536 SPATA31A1Q5TZJ5 1347 aa15.07■□□□□ 0
PDGFRA-205ENST00000507536 PEAK1Q9H792 1746 aa15.06■□□□□ 0
PDGFRA-205ENST00000507536 CHRNA2Q15822 529 aa15.06■□□□□ 0
PDGFRA-205ENST00000507536 NBPF1Q3BBV0 1214 aa15.06■□□□□ 0
PDGFRA-205ENST00000507536 SSH2Q76I76 1423 aa15.06■□□□□ 0
PDGFRA-205ENST00000507536 POTEIP0CG38 1075 aa15.05■□□□□ -0
PDGFRA-205ENST00000507536 USP19O94966 1318 aa15.05■□□□□ -0
PDGFRA-205ENST00000507536 LRRC37A3O60309 1634 aa15.04■□□□□ -0
PDGFRA-205ENST00000507536 PLEKHG3A1L390 1219 aa15.04■□□□□ -0
PDGFRA-205ENST00000507536 BAG6P46379 1132 aa15.04■□□□□ -0
PDGFRA-205ENST00000507536 NUTM2GQ5VZR2 741 aa15.04■□□□□ -0
PDGFRA-205ENST00000507536 FAM212AQ96EL1 285 aa15.04■□□□□ -0
PDGFRA-205ENST00000507536 MS4A3Q96HJ5 214 aa15.04■□□□□ -0
PDGFRA-205ENST00000507536 RGPD3A6NKT7 1758 aaPredicted RBP15.03■□□□□ -0
PDGFRA-205ENST00000507536 RGPD4Q7Z3J3 1758 aa15.03■□□□□ -0
PDGFRA-205ENST00000507536 SLIT3O75094 1523 aa15.03■□□□□ -0
PDGFRA-205ENST00000507536 PPIP5K1Q6PFW1 1433 aa15.03■□□□□ -0
PDGFRA-205ENST00000507536 CPDO75976 1380 aa15.03■□□□□ -0
PDGFRA-205ENST00000507536 PSDA5PKW4 1024 aaPredicted RBP15.03■□□□□ -0
PDGFRA-205ENST00000507536 EN1Q05925 392 aaPredicted RBP15.03■□□□□ -0
PDGFRA-205ENST00000507536 NBPF8Q3BBV2 869 aa15.03■□□□□ -0
PDGFRA-205ENST00000507536 ZC3H6P61129 1189 aaKnown RBP15.02■□□□□ -0
PDGFRA-205ENST00000507536 KIF12Q96FN5 646 aa15.02■□□□□ -0
PDGFRA-205ENST00000507536 COL5A2P05997 1499 aaPredicted RBP15.01□□□□□ -0.01
PDGFRA-205ENST00000507536 STRN4Q9NRL3 753 aa15□□□□□ -0.01
PDGFRA-205ENST00000507536 MON2Q7Z3U7 1717 aa15□□□□□ -0.01
PDGFRA-205ENST00000507536 USP6P35125 1406 aa14.99□□□□□ -0.01
PDGFRA-205ENST00000507536 CENPJQ9HC77 1338 aaPredicted RBP14.98□□□□□ -0.01
PDGFRA-205ENST00000507536 USP54Q70EL1 1684 aa14.98□□□□□ -0.01
PDGFRA-205ENST00000507536 LARP1Q6PKG0 1096 aaKnown RBP14.98□□□□□ -0.01
PDGFRA-205ENST00000507536 BARGINQ6ZT62 677 aa14.98□□□□□ -0.01
PDGFRA-205ENST00000507536 MAP3K13O43283 966 aa14.97□□□□□ -0.01
PDGFRA-205ENST00000507536 TRIM37O94972 964 aa14.97□□□□□ -0.01
PDGFRA-205ENST00000507536 EZH2Q15910 746 aaKnown RBP14.97□□□□□ -0.01
PDGFRA-205ENST00000507536 ABTB2Q8N961 1025 aa14.97□□□□□ -0.01
PDGFRA-205ENST00000507536 CAMKK2Q96RR4 588 aa14.97□□□□□ -0.01
PDGFRA-205ENST00000507536 DCAF8Q5TAQ9 597 aa14.96□□□□□ -0.01
PDGFRA-205ENST00000507536 FAM196AQ6ZSG2 479 aa14.96□□□□□ -0.01
PDGFRA-205ENST00000507536 CABP2Q9NPB3 220 aa14.96□□□□□ -0.01
PDGFRA-205ENST00000507536 USP35Q9P2H5 1018 aa14.96□□□□□ -0.01
PDGFRA-205ENST00000507536 R3HDM1Q15032 1099 aaKnown RBP14.95□□□□□ -0.02
PDGFRA-205ENST00000507536 SPOCK2Q92563 424 aa14.95□□□□□ -0.02
PDGFRA-205ENST00000507536 DCBLD2Q96PD2 775 aa14.95□□□□□ -0.02
PDGFRA-205ENST00000507536 LTN1O94822 1766 aa14.95□□□□□ -0.02
PDGFRA-205ENST00000507536 BRD4O60885 1362 aaPredicted RBP14.95□□□□□ -0.02
PDGFRA-205ENST00000507536 PARD3Q8TEW0 1356 aa14.95□□□□□ -0.02
PDGFRA-205ENST00000507536 CASZ1Q86V15 1759 aa14.94□□□□□ -0.02
PDGFRA-205ENST00000507536 NFAT5O94916 1531 aa14.94□□□□□ -0.02
PDGFRA-205ENST00000507536 GCP02774 474 aa14.94□□□□□ -0.02
PDGFRA-205ENST00000507536 SRPK2P78362 688 aaKnown RBP14.94□□□□□ -0.02
PDGFRA-205ENST00000507536 CRB1P82279 1406 aa14.93□□□□□ -0.02
PDGFRA-205ENST00000507536 TCP11L2Q8N4U5 519 aa14.93□□□□□ -0.02
PDGFRA-205ENST00000507536 NLRP13Q86W25 1043 aa14.92□□□□□ -0.02
PDGFRA-205ENST00000507536 L3MBTL2Q969R5 705 aa14.92□□□□□ -0.02
PDGFRA-205ENST00000507536 AATKQ6ZMQ8 1374 aa14.92□□□□□ -0.02
PDGFRA-205ENST00000507536 EVA1CP58658 441 aa14.91□□□□□ -0.02
PDGFRA-205ENST00000507536 CABP1Q9NZU7 370 aa14.91□□□□□ -0.02
PDGFRA-205ENST00000507536 APBA3O96018 575 aa14.9□□□□□ -0.02
PDGFRA-205ENST00000507536 THRAP3Q9Y2W1 955 aaKnown RBP14.9□□□□□ -0.02
PDGFRA-205ENST00000507536 CPSF1Q10570 1443 aaKnown RBP14.9□□□□□ -0.02
PDGFRA-205ENST00000507536 UTRNP46939 3433 aa14.89□□□□□ -0.03
PDGFRA-205ENST00000507536 ABCC6O95255 1503 aa14.89□□□□□ -0.03
PDGFRA-205ENST00000507536 PDE3BQ13370 1112 aa14.89□□□□□ -0.03
PDGFRA-205ENST00000507536 TRPC6Q9Y210 931 aa14.89□□□□□ -0.03
PDGFRA-205ENST00000507536 OVOS2A0A0G2JMS6 1433 aa14.89□□□□□ -0.03
PDGFRA-205ENST00000507536 OVOS2A0A0J9YW53 1432 aa14.89□□□□□ -0.03
PDGFRA-205ENST00000507536 OVOS2Q6IE36 1432 aa14.89□□□□□ -0.03
PDGFRA-205ENST00000507536 PYGBP11216 843 aa14.87□□□□□ -0.03
PDGFRA-205ENST00000507536 NLRP6P59044 892 aa14.87□□□□□ -0.03
PDGFRA-205ENST00000507536 SIN3AQ96ST3 1273 aa14.87□□□□□ -0.03
PDGFRA-205ENST00000507536 AXIN2Q9Y2T1 843 aa14.87□□□□□ -0.03
PDGFRA-205ENST00000507536 NHSQ6T4R5 1651 aa14.87□□□□□ -0.03
PDGFRA-205ENST00000507536 CD163L1Q9NR16 1453 aa14.86□□□□□ -0.03
PDGFRA-205ENST00000507536 EVC2Q86UK5 1308 aa14.86□□□□□ -0.03
PDGFRA-205ENST00000507536 ROCK2O75116 1388 aaKnown RBP14.85□□□□□ -0.03
PDGFRA-205ENST00000507536 GSE1Q14687 1217 aa14.85□□□□□ -0.03
PDGFRA-205ENST00000507536 PCDHB13Q9Y5F0 798 aa14.85□□□□□ -0.03
PDGFRA-205ENST00000507536 TTC21BQ7Z4L5 1316 aa14.85□□□□□ -0.03
PDGFRA-205ENST00000507536 WDR17Q8IZU2 1322 aa14.85□□□□□ -0.03
PDGFRA-205ENST00000507536 PTF1AQ7RTS3 328 aa14.84□□□□□ -0.03
PDGFRA-205ENST00000507536 BCL9O00512 1426 aa14.83□□□□□ -0.03
PDGFRA-205ENST00000507536 BTAF1O14981 1849 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms