RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 ZNF335Q9H4Z2 1342 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-224ENST00000507215 TOM1O60784 492 aa10.92□□□□□ -0.66
NR1I3-224ENST00000507215 NECTIN2Q92692 538 aa10.92□□□□□ -0.66
NR1I3-224ENST00000507215 TBC1D2Q9BYX2 928 aa10.92□□□□□ -0.66
NR1I3-224ENST00000507215 ATP7AQ04656 1500 aa10.92□□□□□ -0.66
NR1I3-224ENST00000507215 A2MP01023 1474 aa10.92□□□□□ -0.66
NR1I3-224ENST00000507215 PTPRKQ15262 1439 aa10.92□□□□□ -0.66
NR1I3-224ENST00000507215 NYAP1Q6ZVC0 841 aa10.91□□□□□ -0.66
NR1I3-224ENST00000507215 LRRIQ1Q96JM4 1722 aa10.91□□□□□ -0.66
NR1I3-224ENST00000507215 FYCO1Q9BQS8 1478 aa10.91□□□□□ -0.66
NR1I3-224ENST00000507215 INO80Q9ULG1 1556 aaPredicted RBP10.9□□□□□ -0.66
NR1I3-224ENST00000507215 CLTCQ00610 1675 aaKnown RBP10.9□□□□□ -0.66
NR1I3-224ENST00000507215 A2ML1A8K2U0 1454 aa10.9□□□□□ -0.66
NR1I3-224ENST00000507215 MOXD2PA6NHM9 499 aa10.9□□□□□ -0.66
NR1I3-224ENST00000507215 GUCA2AQ02747 115 aa10.9□□□□□ -0.66
NR1I3-224ENST00000507215 BLOC1S3Q6QNY0 202 aa10.9□□□□□ -0.66
NR1I3-224ENST00000507215 SYCP2Q9BX26 1530 aa10.89□□□□□ -0.67
NR1I3-224ENST00000507215 ADGBQ8N7X0 1667 aa10.89□□□□□ -0.67
NR1I3-224ENST00000507215 HOXA2O43364 376 aa10.89□□□□□ -0.67
NR1I3-224ENST00000507215 NDUFV2P19404 249 aa10.89□□□□□ -0.67
NR1I3-224ENST00000507215 TJAP1Q5JTD0 557 aa10.89□□□□□ -0.67
NR1I3-224ENST00000507215 MORN1Q5T089 497 aa10.89□□□□□ -0.67
NR1I3-224ENST00000507215 NUTM1Q86Y26 1132 aa10.89□□□□□ -0.67
NR1I3-224ENST00000507215 DDRGK1Q96HY6 314 aa10.89□□□□□ -0.67
NR1I3-224ENST00000507215 PCDHB3Q9Y5E6 796 aa10.89□□□□□ -0.67
NR1I3-224ENST00000507215 GPATCH8Q9UKJ3 1502 aaKnown RBP10.89□□□□□ -0.67
NR1I3-224ENST00000507215 ATP6V1AP38606 617 aa10.88□□□□□ -0.67
NR1I3-224ENST00000507215 COPS2P61201 443 aa10.88□□□□□ -0.67
NR1I3-224ENST00000507215 MYSM1Q5VVJ2 828 aa10.88□□□□□ -0.67
NR1I3-224ENST00000507215 ZNF516Q92618 1163 aa10.88□□□□□ -0.67
NR1I3-224ENST00000507215 MTRQ99707 1265 aa10.88□□□□□ -0.67
NR1I3-224ENST00000507215 MED1Q15648 1581 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-224ENST00000507215 PRR14Q9BWN1 585 aa10.87□□□□□ -0.67
NR1I3-224ENST00000507215 CFDP1Q9UEE9 299 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-224ENST00000507215 POLR1AO95602 1720 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-224ENST00000507215 RTEL1-TNFRSF6BF6WH68 1400 aa10.86□□□□□ -0.67
NR1I3-224ENST00000507215 ZNF777Q9ULD5 760 aaPredicted RBP10.86□□□□□ -0.67
NR1I3-224ENST00000507215 PCDHGC3Q9UN70 934 aa10.86□□□□□ -0.67
NR1I3-224ENST00000507215 SLC27A5Q9Y2P5 690 aa10.86□□□□□ -0.67
NR1I3-224ENST00000507215 DNMT1P26358 1616 aaKnown RBP10.86□□□□□ -0.67
NR1I3-224ENST00000507215 CCNB3Q8WWL7 1395 aa10.86□□□□□ -0.67
NR1I3-224ENST00000507215 USP46P62068 366 aa10.85□□□□□ -0.67
NR1I3-224ENST00000507215 GGT6Q6P531 493 aa10.85□□□□□ -0.67
NR1I3-224ENST00000507215 SCUBE3Q8IX30 993 aa10.85□□□□□ -0.67
NR1I3-224ENST00000507215 LIMD1Q9UGP4 676 aa10.85□□□□□ -0.67
NR1I3-224ENST00000507215 SHANK2Q9UPX8 1470 aa10.85□□□□□ -0.67
NR1I3-224ENST00000507215 HSPA1LP34931 641 aa10.84□□□□□ -0.67
NR1I3-224ENST00000507215 HNRNPMP52272 730 aaKnown RBP eCLIP10.84□□□□□ -0.67
NR1I3-224ENST00000507215 THEMISQ8N1K5 641 aaPredicted RBP10.84□□□□□ -0.67
NR1I3-224ENST00000507215 POLR3EQ9NVU0 708 aa10.84□□□□□ -0.67
NR1I3-224ENST00000507215 NLRP1Q9C000 1473 aa10.84□□□□□ -0.67
NR1I3-224ENST00000507215 TNRQ92752 1358 aa10.83□□□□□ -0.68
NR1I3-224ENST00000507215 RSBN1LQ6PCB5 846 aaPredicted RBP10.83□□□□□ -0.68
NR1I3-224ENST00000507215 ANKLE2Q86XL3 938 aa10.83□□□□□ -0.68
NR1I3-224ENST00000507215 PROCA1Q8NCQ7 364 aaPredicted RBP10.83□□□□□ -0.68
NR1I3-224ENST00000507215 PCDHB15Q9Y5E8 787 aa10.83□□□□□ -0.68
NR1I3-224ENST00000507215 MED14O60244 1454 aa10.82□□□□□ -0.68
NR1I3-224ENST00000507215 PZPP20742 1482 aa10.82□□□□□ -0.68
NR1I3-224ENST00000507215 DHX29Q7Z478 1369 aaKnown RBP10.82□□□□□ -0.68
NR1I3-224ENST00000507215 SPTLC1O15269 473 aa10.82□□□□□ -0.68
NR1I3-224ENST00000507215 FBXO31Q5XUX0 539 aaPredicted RBP10.82□□□□□ -0.68
NR1I3-224ENST00000507215 RIC3Q7Z5B4 369 aa10.82□□□□□ -0.68
NR1I3-224ENST00000507215 NKX2-3Q8TAU0 364 aa10.82□□□□□ -0.68
NR1I3-224ENST00000507215 DEPDC5O75140 1603 aa10.82□□□□□ -0.68
NR1I3-224ENST00000507215 KDM5DQ9BY66 1539 aa10.82□□□□□ -0.68
NR1I3-224ENST00000507215 TLL1O43897 1013 aa10.81□□□□□ -0.68
NR1I3-224ENST00000507215 ITGBL1O95965 494 aaPredicted RBP10.81□□□□□ -0.68
NR1I3-224ENST00000507215 FDX1P10109 184 aa10.81□□□□□ -0.68
NR1I3-224ENST00000507215 PIP4K2BP78356 416 aa10.81□□□□□ -0.68
NR1I3-224ENST00000507215 SH3D19Q5HYK7 790 aa10.81□□□□□ -0.68
NR1I3-224ENST00000507215 RNF19BQ6ZMZ0 732 aa10.81□□□□□ -0.68
NR1I3-224ENST00000507215 SYMPKQ92797 1274 aaKnown RBP10.81□□□□□ -0.68
NR1I3-224ENST00000507215 THAP11Q96EK4 314 aa10.81□□□□□ -0.68
NR1I3-224ENST00000507215 IL21Q9HBE4 155 aa10.81□□□□□ -0.68
NR1I3-224ENST00000507215 MTUS2Q5JR59 1369 aa10.8□□□□□ -0.68
NR1I3-224ENST00000507215 ZPR1O75312 459 aa10.8□□□□□ -0.68
NR1I3-224ENST00000507215 SKIV2LQ15477 1246 aaKnown RBP10.8□□□□□ -0.68
NR1I3-224ENST00000507215 NEURL4Q96JN8 1562 aa10.8□□□□□ -0.68
NR1I3-224ENST00000507215 SYNMO15061 1565 aa10.79□□□□□ -0.68
NR1I3-224ENST00000507215 DIXDC1Q155Q3 683 aa10.79□□□□□ -0.68
NR1I3-224ENST00000507215 GRIPAP1Q4V328 841 aa10.79□□□□□ -0.68
NR1I3-224ENST00000507215 RSPH6AQ9H0K4 717 aa10.79□□□□□ -0.68
NR1I3-224ENST00000507215 VWDEQ8N2E2 1590 aa10.78□□□□□ -0.68
NR1I3-224ENST00000507215 NPHP4O75161 1426 aaPredicted RBP10.78□□□□□ -0.68
NR1I3-224ENST00000507215 MIA2Q96PC5 1412 aa10.78□□□□□ -0.68
NR1I3-224ENST00000507215 NR1I2O75469 434 aa10.78□□□□□ -0.68
NR1I3-224ENST00000507215 CLK2P49760 499 aaKnown RBP10.78□□□□□ -0.68
NR1I3-224ENST00000507215 BRICD5Q6PL45 260 aa10.78□□□□□ -0.68
NR1I3-224ENST00000507215 MBD5Q9P267 1494 aa10.78□□□□□ -0.68
NR1I3-224ENST00000507215 WASHC2CQ9Y4E1 1318 aa10.78□□□□□ -0.68
NR1I3-224ENST00000507215 UGGT1Q9NYU2 1555 aa10.77□□□□□ -0.68
NR1I3-224ENST00000507215 RNF17Q9BXT8 1623 aaKnown RBP10.77□□□□□ -0.68
NR1I3-224ENST00000507215 QPCTQ16769 361 aa10.77□□□□□ -0.69
NR1I3-224ENST00000507215 CSPP1Q1MSJ5 1256 aa10.77□□□□□ -0.69
NR1I3-224ENST00000507215 EHBP1L1Q8N3D4 1523 aa10.77□□□□□ -0.69
NR1I3-224ENST00000507215 CCDC141Q6ZP82 1450 aa10.76□□□□□ -0.69
NR1I3-224ENST00000507215 GJA5P36382 358 aa10.76□□□□□ -0.69
NR1I3-224ENST00000507215 KCNC4Q03721 635 aa10.76□□□□□ -0.69
NR1I3-224ENST00000507215 CABLES1Q8TDN4 633 aa10.76□□□□□ -0.69
NR1I3-224ENST00000507215 IQGAP1P46940 1657 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms