RNA–Protein interactions for RNA: ENST00000506974.5

NDUFS4-204, Transcript of NADH:ubiquinone oxidoreductase subunit S4, humanhuman

TSL 1 (best)

Gene NDUFS4, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4-204ENST00000506974 CRYBG1Q9Y4K1 1723 aa13.66□□□□□ -0.22
NDUFS4-204ENST00000506974 PXDNQ92626 1479 aa13.66□□□□□ -0.22
NDUFS4-204ENST00000506974 AHDC1Q5TGY3 1603 aaPredicted RBP13.65□□□□□ -0.22
NDUFS4-204ENST00000506974 MAP2P11137 1827 aaKnown RBP13.65□□□□□ -0.22
NDUFS4-204ENST00000506974 JCADQ9P266 1359 aa13.65□□□□□ -0.22
NDUFS4-204ENST00000506974 BRD4O60885 1362 aaPredicted RBP13.64□□□□□ -0.23
NDUFS4-204ENST00000506974 NSD2O96028 1365 aa13.64□□□□□ -0.23
NDUFS4-204ENST00000506974 NGDNQ8NEJ9 315 aaKnown RBP13.64□□□□□ -0.23
NDUFS4-204ENST00000506974 KNSTRNQ9Y448 316 aa13.64□□□□□ -0.23
NDUFS4-204ENST00000506974 PARD3Q8TEW0 1356 aa13.63□□□□□ -0.23
NDUFS4-204ENST00000506974 LRRC59Q96AG4 307 aaKnown RBP13.63□□□□□ -0.23
NDUFS4-204ENST00000506974 CGNL1Q0VF96 1302 aa13.63□□□□□ -0.23
NDUFS4-204ENST00000506974 SPATA31A6Q5VVP1 1343 aa13.63□□□□□ -0.23
NDUFS4-204ENST00000506974 TTC21BQ7Z4L5 1316 aa13.63□□□□□ -0.23
NDUFS4-204ENST00000506974 PHLPP1O60346 1717 aa13.62□□□□□ -0.23
NDUFS4-204ENST00000506974 ABCA3Q99758 1704 aa13.62□□□□□ -0.23
NDUFS4-204ENST00000506974 PRKRIP1Q9H875 184 aaPredicted RBP13.61□□□□□ -0.23
NDUFS4-204ENST00000506974 OVOS2A0A0J9YW53 1432 aa13.61□□□□□ -0.23
NDUFS4-204ENST00000506974 OVOS2Q6IE36 1432 aa13.61□□□□□ -0.23
NDUFS4-204ENST00000506974 TTC21AQ8NDW8 1320 aa13.61□□□□□ -0.23
NDUFS4-204ENST00000506974 PHRF1Q9P1Y6 1649 aaKnown RBP13.61□□□□□ -0.23
NDUFS4-204ENST00000506974 FYB1O15117 783 aa13.6□□□□□ -0.23
NDUFS4-204ENST00000506974 FOXO3O43524 673 aa13.6□□□□□ -0.23
NDUFS4-204ENST00000506974 PAK3O75914 559 aaPredicted RBP13.6□□□□□ -0.23
NDUFS4-204ENST00000506974 PDAP1Q13442 181 aaKnown RBP13.6□□□□□ -0.23
NDUFS4-204ENST00000506974 LTN1O94822 1766 aa13.6□□□□□ -0.23
NDUFS4-204ENST00000506974 COL16A1Q07092 1604 aaPredicted RBP13.6□□□□□ -0.23
NDUFS4-204ENST00000506974 SOS2Q07890 1332 aaPredicted RBP13.6□□□□□ -0.23
NDUFS4-204ENST00000506974 MED1Q15648 1581 aaPredicted RBP13.59□□□□□ -0.23
NDUFS4-204ENST00000506974 ANP32CO43423 234 aa13.59□□□□□ -0.23
NDUFS4-204ENST00000506974 CC2D1BQ5T0F9 858 aaKnown RBP13.59□□□□□ -0.23
NDUFS4-204ENST00000506974 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.59□□□□□ -0.238e-7■■■■□ 24.1
NDUFS4-204ENST00000506974 NPHP3Q7Z494 1330 aa13.59□□□□□ -0.23
NDUFS4-204ENST00000506974 SBNO1A3KN83 1393 aa13.58□□□□□ -0.23
NDUFS4-204ENST00000506974 USP31Q70CQ4 1352 aa13.58□□□□□ -0.23
NDUFS4-204ENST00000506974 NME9Q86XW9 330 aa13.58□□□□□ -0.24
NDUFS4-204ENST00000506974 ZNF579Q8NAF0 562 aaKnown RBP13.58□□□□□ -0.24
NDUFS4-204ENST00000506974 DDX17Q92841 729 aaKnown RBP13.58□□□□□ -0.24
NDUFS4-204ENST00000506974 PSME1Q06323 249 aa13.57□□□□□ -0.24
NDUFS4-204ENST00000506974 KRT28Q7Z3Y7 464 aa13.57□□□□□ -0.24
NDUFS4-204ENST00000506974 GGNBP2Q9H3C7 697 aa13.57□□□□□ -0.24
NDUFS4-204ENST00000506974 SLIT3O75094 1523 aa13.57□□□□□ -0.24
NDUFS4-204ENST00000506974 COL22A1Q8NFW1 1626 aaPredicted RBP13.57□□□□□ -0.24
NDUFS4-204ENST00000506974 TNS3Q68CZ2 1445 aa13.56□□□□□ -0.24
NDUFS4-204ENST00000506974 XPCQ01831 940 aaPredicted RBP13.56□□□□□ -0.24
NDUFS4-204ENST00000506974 RALBP1Q15311 655 aa13.56□□□□□ -0.24
NDUFS4-204ENST00000506974 ZRANB1Q9UGI0 708 aa13.56□□□□□ -0.24
NDUFS4-204ENST00000506974 NFAT5O94916 1531 aa13.55□□□□□ -0.24
NDUFS4-204ENST00000506974 CNGB1Q14028 1251 aaPredicted RBP13.55□□□□□ -0.24
NDUFS4-204ENST00000506974 CHRDL2Q6WN34 429 aa13.55□□□□□ -0.24
NDUFS4-204ENST00000506974 SHPRHQ149N8 1683 aa13.55□□□□□ -0.24
NDUFS4-204ENST00000506974 PEAK1Q9H792 1746 aa13.55□□□□□ -0.24
NDUFS4-204ENST00000506974 MYBBP1AQ9BQG0 1328 aaKnown RBP13.54□□□□□ -0.24
NDUFS4-204ENST00000506974 SPATA31A3Q5VYP0 1347 aa13.53□□□□□ -0.24
NDUFS4-204ENST00000506974 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
NDUFS4-204ENST00000506974 RGPD5Q99666 1765 aa13.53□□□□□ -0.24
NDUFS4-204ENST00000506974 MORC1Q86VD1 984 aa13.52□□□□□ -0.25
NDUFS4-204ENST00000506974 COG3Q96JB2 828 aa13.52□□□□□ -0.25
NDUFS4-204ENST00000506974 USP19O94966 1318 aa13.52□□□□□ -0.25
NDUFS4-204ENST00000506974 AATKQ6ZMQ8 1374 aa13.52□□□□□ -0.25
NDUFS4-204ENST00000506974 ARHGEF10O15013 1369 aa13.51□□□□□ -0.25
NDUFS4-204ENST00000506974 PNPLA6Q8IY17 1366 aa13.51□□□□□ -0.25
NDUFS4-204ENST00000506974 PPP2R1AP30153 589 aa13.51□□□□□ -0.25
NDUFS4-204ENST00000506974 ABTB2Q8N961 1025 aa13.51□□□□□ -0.25
NDUFS4-204ENST00000506974 COL18A1P39060 1754 aa13.5□□□□□ -0.25
NDUFS4-204ENST00000506974 CCER2I3L3R5 266 aa13.5□□□□□ -0.25
NDUFS4-204ENST00000506974 NBR1Q14596 966 aa13.5□□□□□ -0.25
NDUFS4-204ENST00000506974 COL3A1P02461 1466 aaPredicted RBP13.49□□□□□ -0.25
NDUFS4-204ENST00000506974 NLRP6P59044 892 aa13.49□□□□□ -0.25
NDUFS4-204ENST00000506974 NUTM2GQ5VZR2 741 aa13.49□□□□□ -0.25
NDUFS4-204ENST00000506974 ILDR2Q71H61 639 aa13.49□□□□□ -0.25
NDUFS4-204ENST00000506974 PIP4P2Q8N4L2 257 aa13.49□□□□□ -0.25
NDUFS4-204ENST00000506974 PCDHB8Q9UN66 801 aa13.49□□□□□ -0.25
NDUFS4-204ENST00000506974 PCDHB13Q9Y5F0 798 aa13.49□□□□□ -0.25
NDUFS4-204ENST00000506974 CDK12Q9NYV4 1490 aaPredicted RBP13.48□□□□□ -0.25
NDUFS4-204ENST00000506974 PSEN1P49768 467 aa13.48□□□□□ -0.25
NDUFS4-204ENST00000506974 CCDC184Q52MB2 194 aa13.48□□□□□ -0.25
NDUFS4-204ENST00000506974 ZNF772Q68DY9 489 aaPredicted RBP13.48□□□□□ -0.25
NDUFS4-204ENST00000506974 NLRP13Q86W25 1043 aa13.48□□□□□ -0.25
NDUFS4-204ENST00000506974 RGS17Q9UGC6 210 aaPredicted RBP13.48□□□□□ -0.25
NDUFS4-204ENST00000506974 TNNT2P45379 298 aaPredicted RBP13.47□□□□□ -0.25
NDUFS4-204ENST00000506974 RGPD2P0DJD1 1756 aa13.46□□□□□ -0.25
NDUFS4-204ENST00000506974 ABCC6O95255 1503 aa13.46□□□□□ -0.25
NDUFS4-204ENST00000506974 SOCS7O14512 581 aa13.46□□□□□ -0.25
NDUFS4-204ENST00000506974 FBLN1P23142 703 aa13.46□□□□□ -0.25
NDUFS4-204ENST00000506974 MEX3CQ5U5Q3 659 aaKnown RBP13.46□□□□□ -0.25
NDUFS4-204ENST00000506974 RGPD1P0DJD0 1748 aa13.46□□□□□ -0.25
NDUFS4-204ENST00000506974 LMO7Q8WWI1 1683 aa13.46□□□□□ -0.26
NDUFS4-204ENST00000506974 LMOD2Q6P5Q4 547 aa13.45□□□□□ -0.26
NDUFS4-204ENST00000506974 POLKQ9UBT6 870 aa13.45□□□□□ -0.26
NDUFS4-204ENST00000506974 LRP6O75581 1613 aa13.45□□□□□ -0.26
NDUFS4-204ENST00000506974 INSRP06213 1382 aa13.45□□□□□ -0.26
NDUFS4-204ENST00000506974 MTHFSP49914 203 aa13.44□□□□□ -0.26
NDUFS4-204ENST00000506974 NUTM2BA6NNL0 878 aaPredicted RBP13.43□□□□□ -0.26
NDUFS4-204ENST00000506974 NUTM2EB1AL46 878 aaPredicted RBP13.43□□□□□ -0.26
NDUFS4-204ENST00000506974 GCP02774 474 aa13.43□□□□□ -0.26
NDUFS4-204ENST00000506974 RRS1Q15050 365 aaKnown RBP13.43□□□□□ -0.26
NDUFS4-204ENST00000506974 NUTM2AQ8IVF1 878 aaPredicted RBP13.43□□□□□ -0.26
NDUFS4-204ENST00000506974 KCNH5Q8NCM2 988 aa13.43□□□□□ -0.26
NDUFS4-204ENST00000506974 EMILIN1Q9Y6C2 1016 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms