RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 CEBPZQ03701 1054 aaKnown RBP6.18□□□□□ -1.42
MATR3-211ENST00000505625 MKRN3Q13064 507 aaKnown RBP6.18□□□□□ -1.42
MATR3-211ENST00000505625 PLEKHO1Q53GL0 409 aaPredicted RBP6.18□□□□□ -1.42
MATR3-211ENST00000505625 OTUD6BQ8N6M0 293 aa6.18□□□□□ -1.42
MATR3-211ENST00000505625 IRAK4Q9NWZ3 460 aa6.18□□□□□ -1.42
MATR3-211ENST00000505625 VGFO15240 615 aaPredicted RBP6.18□□□□□ -1.42
MATR3-211ENST00000505625 THEMISQ8N1K5 641 aaPredicted RBP6.18□□□□□ -1.42
MATR3-211ENST00000505625 RWDD1Q9H446 243 aaPredicted RBP6.18□□□□□ -1.42
MATR3-211ENST00000505625 MKNK2Q9HBH9 465 aa6.18□□□□□ -1.42
MATR3-211ENST00000505625 ZRSR2Q15696 482 aaKnown RBP6.18□□□□□ -1.42
MATR3-211ENST00000505625 DZIP1LQ8IYY4 767 aaKnown RBP6.18□□□□□ -1.42
MATR3-211ENST00000505625 CUL5Q93034 780 aa6.18□□□□□ -1.42
MATR3-211ENST00000505625 MSL1Q68DK7 614 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 STARD3NLO95772 234 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 ARID5AQ03989 594 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 DHX8Q14562 1220 aaKnown RBP6.17□□□□□ -1.42
MATR3-211ENST00000505625 ACRBPQ8NEB7 543 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 DCAF1Q9Y4B6 1507 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 TCIRG1Q13488 830 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 JDP2Q8WYK2 163 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 VAT1LQ9HCJ6 419 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 MINDY4BA8MYZ0 360 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 BICD1Q96G01 975 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 GBP2P32456 591 aaPredicted RBP6.17□□□□□ -1.42
MATR3-211ENST00000505625 SP4Q02446 784 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 TMEM132EQ6IEE7 984 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 RUFY2Q8WXA3 655 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 JPH4Q96JJ6 628 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 SEC63Q9UGP8 760 aaKnown RBP6.17□□□□□ -1.42
MATR3-211ENST00000505625 ST18O60284 1047 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 FCHSD2O94868 740 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 TNNT1P13805 278 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 PICALMQ13492 652 aa6.17□□□□□ -1.42
MATR3-211ENST00000505625 CAVIN4Q5BKX8 364 aa6.16□□□□□ -1.42
MATR3-211ENST00000505625 MMRN2Q9H8L6 949 aa6.16□□□□□ -1.42
MATR3-211ENST00000505625 STK32BQ9NY57 414 aa6.16□□□□□ -1.42
MATR3-211ENST00000505625 VPS37CA5D8V6 355 aaPredicted RBP6.16□□□□□ -1.42
MATR3-211ENST00000505625 TXLNAP40222 546 aa6.16□□□□□ -1.42
MATR3-211ENST00000505625 GPHNQ9NQX3 736 aaPredicted RBP6.16□□□□□ -1.42
MATR3-211ENST00000505625 CHMP5Q9NZZ3 219 aa6.16□□□□□ -1.42
MATR3-211ENST00000505625 EXOC5O00471 708 aa6.16□□□□□ -1.42
MATR3-211ENST00000505625 GPTP24298 496 aa6.16□□□□□ -1.42
MATR3-211ENST00000505625 FSD1Q9BTV5 496 aa6.16□□□□□ -1.42
MATR3-211ENST00000505625 BTBD11A6QL63 1104 aa6.16□□□□□ -1.42
MATR3-211ENST00000505625 FAM200AQ8TCP9 573 aa6.16□□□□□ -1.42
MATR3-211ENST00000505625 GBP4Q96PP9 640 aa6.16□□□□□ -1.42
MATR3-211ENST00000505625 ATP2C2O75185 946 aa6.15□□□□□ -1.42
MATR3-211ENST00000505625 RIPK4P57078 832 aa6.15□□□□□ -1.42
MATR3-211ENST00000505625 STK3Q13188 491 aa6.15□□□□□ -1.42
MATR3-211ENST00000505625 CCDC157Q569K6 752 aa6.15□□□□□ -1.42
MATR3-211ENST00000505625 OGFOD1Q8N543 542 aa6.15□□□□□ -1.42
MATR3-211ENST00000505625 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.15□□□□□ -1.42
MATR3-211ENST00000505625 MAP7D2Q96T17 732 aa6.15□□□□□ -1.42
MATR3-211ENST00000505625 NLRP5P59047 1200 aa6.15□□□□□ -1.42
MATR3-211ENST00000505625 OLFM4Q6UX06 510 aa6.15□□□□□ -1.42
MATR3-211ENST00000505625 DDX23Q9BUQ8 820 aaKnown RBP6.15□□□□□ -1.42
MATR3-211ENST00000505625 FNDC3AQ9Y2H6 1198 aaKnown RBP6.15□□□□□ -1.42
MATR3-211ENST00000505625 APBA3O96018 575 aa6.15□□□□□ -1.42
MATR3-211ENST00000505625 LMAN1P49257 510 aa6.15□□□□□ -1.42
MATR3-211ENST00000505625 BCS1LQ9Y276 419 aa6.15□□□□□ -1.42
MATR3-211ENST00000505625 ZKSCAN1P17029 563 aaPredicted RBP6.15□□□□□ -1.43
MATR3-211ENST00000505625 ZNF530Q6P9A1 599 aaPredicted RBP6.15□□□□□ -1.43
MATR3-211ENST00000505625 CCDC117Q8IWD4 279 aaPredicted RBP6.15□□□□□ -1.43
MATR3-211ENST00000505625 USHBP1Q8N6Y0 703 aa6.15□□□□□ -1.43
MATR3-211ENST00000505625 FAM47CQ5HY64 1035 aa6.15□□□□□ -1.43
MATR3-211ENST00000505625 CGNL1Q0VF96 1302 aa6.14□□□□□ -1.43
MATR3-211ENST00000505625 TERF1P54274 439 aa6.14□□□□□ -1.43
MATR3-211ENST00000505625 ANKRD18AQ8IVF6 992 aa6.14□□□□□ -1.43
MATR3-211ENST00000505625 PRC1O43663 620 aa6.14□□□□□ -1.43
MATR3-211ENST00000505625 DIAPH1O60610 1272 aaKnown RBP6.14□□□□□ -1.43
MATR3-211ENST00000505625 IFNLR1Q8IU57 520 aaPredicted RBP6.14□□□□□ -1.43
MATR3-211ENST00000505625 ANO3Q9BYT9 981 aa6.14□□□□□ -1.43
MATR3-211ENST00000505625 ZBTB21Q9ULJ3 1066 aa6.14□□□□□ -1.43
MATR3-211ENST00000505625 SMARCA4P51532 1647 aa6.14□□□□□ -1.43
MATR3-211ENST00000505625 AKNAD1Q5T1N1 836 aa6.14□□□□□ -1.43
MATR3-211ENST00000505625 RNF20Q5VTR2 975 aa6.14□□□□□ -1.43
MATR3-211ENST00000505625 PPP6R1Q9UPN7 881 aa6.14□□□□□ -1.43
MATR3-211ENST00000505625 IDH1O75874 414 aaKnown RBP6.14□□□□□ -1.43
MATR3-211ENST00000505625 UBTFL1P0CB47 393 aaPredicted RBP6.14□□□□□ -1.43
MATR3-211ENST00000505625 CCDC129Q6ZRS4 1044 aa6.14□□□□□ -1.43
MATR3-211ENST00000505625 TAX1BP1Q86VP1 789 aa6.14□□□□□ -1.43
MATR3-211ENST00000505625 CEBPAP49715 358 aaPredicted RBP6.14□□□□□ -1.43
MATR3-211ENST00000505625 NFKBIBQ15653 356 aa6.14□□□□□ -1.43
MATR3-211ENST00000505625 UIMC1Q96RL1 719 aa6.14□□□□□ -1.43
MATR3-211ENST00000505625 UTP14AQ9BVJ6 771 aaKnown RBP6.14□□□□□ -1.43
MATR3-211ENST00000505625 NACA2Q9H009 215 aa6.14□□□□□ -1.43
MATR3-211ENST00000505625 CEP83Q9Y592 693 aa6.14□□□□□ -1.43
MATR3-211ENST00000505625 FANCD2Q9BXW9 1451 aa6.13□□□□□ -1.43
MATR3-211ENST00000505625 SYNDIG1Q9H7V2 258 aa6.13□□□□□ -1.43
MATR3-211ENST00000505625 ARHGAP5Q13017 1502 aa6.13□□□□□ -1.43
MATR3-211ENST00000505625 HSPA2P54652 639 aa6.13□□□□□ -1.43
MATR3-211ENST00000505625 DDX46Q7L014 1031 aaKnown RBP6.13□□□□□ -1.43
MATR3-211ENST00000505625 CTNNBL1Q8WYA6 563 aaPredicted RBP6.13□□□□□ -1.43
MATR3-211ENST00000505625 GINS2Q9Y248 185 aa6.13□□□□□ -1.43
MATR3-211ENST00000505625 NOC2LQ9Y3T9 749 aaKnown RBP6.13□□□□□ -1.43
MATR3-211ENST00000505625 ATP6V1AP38606 617 aa6.13□□□□□ -1.43
MATR3-211ENST00000505625 METTL24Q5JXM2 366 aa6.13□□□□□ -1.43
MATR3-211ENST00000505625 DEF6Q9H4E7 631 aa6.13□□□□□ -1.43
MATR3-211ENST00000505625 TSPOAP1O95153 1857 aa6.13□□□□□ -1.43
MATR3-211ENST00000505625 EIF4E1BA6NMX2 242 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms