RNA–Protein interactions for RNA: ENST00000505484.5

PRDM5-207, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best)

Gene PRDM5, Length 2,396 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-207ENST00000505484 GCC1Q96CN9 775 aa19.66■□□□□ 0.74
PRDM5-207ENST00000505484 RBSNQ9H1K0 784 aa19.66■□□□□ 0.74
PRDM5-207ENST00000505484 LMBRD1Q9NUN5 540 aa19.66■□□□□ 0.74
PRDM5-207ENST00000505484 CYP2E1P05181 493 aaPredicted RBP19.65■□□□□ 0.74
PRDM5-207ENST00000505484 XPCQ01831 940 aaPredicted RBP19.65■□□□□ 0.74
PRDM5-207ENST00000505484 CAVIN1Q6NZI2 390 aaKnown RBP19.65■□□□□ 0.74
PRDM5-207ENST00000505484 TBC1D9Q6ZT07 1266 aa19.65■□□□□ 0.74
PRDM5-207ENST00000505484 TSR2Q969E8 191 aaKnown RBP19.64■□□□□ 0.74
PRDM5-207ENST00000505484 CFAP44Q96MT7 982 aa19.64■□□□□ 0.74
PRDM5-207ENST00000505484 CCDC39Q9UFE4 941 aa19.64■□□□□ 0.74
PRDM5-207ENST00000505484 TNNT2P45379 298 aaPredicted RBP19.64■□□□□ 0.73
PRDM5-207ENST00000505484 RABEP1Q15276 862 aa19.64■□□□□ 0.73
PRDM5-207ENST00000505484 MCTP1Q6DN14 999 aa19.63■□□□□ 0.73
PRDM5-207ENST00000505484 CHMP4BQ9H444 224 aaKnown RBP19.63■□□□□ 0.73
PRDM5-207ENST00000505484 CLTCQ00610 1675 aaKnown RBP19.63■□□□□ 0.73
PRDM5-207ENST00000505484 NSD2O96028 1365 aa19.63■□□□□ 0.73
PRDM5-207ENST00000505484 U2AF1L5P0DN76 240 aaPredicted RBP19.63■□□□□ 0.73
PRDM5-207ENST00000505484 U2AF1Q01081 240 aaKnown RBP eCLIP19.63■□□□□ 0.73
PRDM5-207ENST00000505484 CWC22Q9HCG8 908 aaKnown RBP19.63■□□□□ 0.73
PRDM5-207ENST00000505484 CEBPAP49715 358 aaPredicted RBP19.62■□□□□ 0.73
PRDM5-207ENST00000505484 UTP14CQ5TAP6 766 aaKnown RBP19.62■□□□□ 0.73
PRDM5-207ENST00000505484 RBM42Q9BTD8 480 aaKnown RBP19.62■□□□□ 0.73
PRDM5-207ENST00000505484 PRIM1P49642 420 aaKnown RBP19.61■□□□□ 0.73
PRDM5-207ENST00000505484 ALDH1L2Q3SY69 923 aa19.61■□□□□ 0.73
PRDM5-207ENST00000505484 MED14O60244 1454 aa19.61■□□□□ 0.73
PRDM5-207ENST00000505484 CDC45O75419 566 aa19.6■□□□□ 0.73
PRDM5-207ENST00000505484 NRXN1Q9ULB1 1477 aa19.6■□□□□ 0.73
PRDM5-207ENST00000505484 NCLP19338 710 aaKnown RBP19.59■□□□□ 0.73
PRDM5-207ENST00000505484 BRPF1P55201 1214 aaPredicted RBP19.59■□□□□ 0.73
PRDM5-207ENST00000505484 CCDC94Q9BW85 323 aaPredicted RBP19.59■□□□□ 0.73
PRDM5-207ENST00000505484 KIF1BO60333 1816 aa19.59■□□□□ 0.73
PRDM5-207ENST00000505484 TMPOP42166 694 aaKnown RBP19.58■□□□□ 0.73
PRDM5-207ENST00000505484 ANKRD45Q5TZF3 282 aa19.58■□□□□ 0.73
PRDM5-207ENST00000505484 LRSAM1Q6UWE0 723 aa19.58■□□□□ 0.73
PRDM5-207ENST00000505484 SLC12A5Q9H2X9 1139 aa19.58■□□□□ 0.73
PRDM5-207ENST00000505484 SETBP1Q9Y6X0 1596 aa19.58■□□□□ 0.73
PRDM5-207ENST00000505484 ESF1Q9H501 851 aaKnown RBP19.58■□□□□ 0.72
PRDM5-207ENST00000505484 TRIM35Q9UPQ4 493 aa19.58■□□□□ 0.72
PRDM5-207ENST00000505484 AGLP35573 1532 aa19.57■□□□□ 0.72
PRDM5-207ENST00000505484 ZNF428Q96B54 188 aa19.57■□□□□ 0.72
PRDM5-207ENST00000505484 PLEKHF1Q96S99 279 aa19.57■□□□□ 0.72
PRDM5-207ENST00000505484 PPIP5K1Q6PFW1 1433 aa19.56■□□□□ 0.72
PRDM5-207ENST00000505484 TMEM132EQ6IEE7 984 aa19.56■□□□□ 0.72
PRDM5-207ENST00000505484 PUS7Q96PZ0 661 aaKnown RBP19.56■□□□□ 0.72
PRDM5-207ENST00000505484 ADGRB3O60242 1522 aa19.55■□□□□ 0.72
PRDM5-207ENST00000505484 PREX1Q8TCU6 1659 aa19.55■□□□□ 0.72
PRDM5-207ENST00000505484 DMTNQ08495 405 aa19.55■□□□□ 0.72
PRDM5-207ENST00000505484 ZC3H13Q5T200 1668 aaKnown RBP19.54■□□□□ 0.72
PRDM5-207ENST00000505484 GPT2Q8TD30 523 aa19.54■□□□□ 0.72
PRDM5-207ENST00000505484 IFT172Q9UG01 1749 aa19.54■□□□□ 0.72
PRDM5-207ENST00000505484 ZBTB7BO15156 539 aaPredicted RBP19.53■□□□□ 0.72
PRDM5-207ENST00000505484 MYRIPQ8NFW9 859 aa19.53■□□□□ 0.72
PRDM5-207ENST00000505484 MYO5BQ9ULV0 1848 aa19.53■□□□□ 0.72
PRDM5-207ENST00000505484 PIK3R4Q99570 1358 aa19.53■□□□□ 0.72
PRDM5-207ENST00000505484 PRPF40AO75400 957 aaKnown RBP19.52■□□□□ 0.72
PRDM5-207ENST00000505484 STAG3Q9UJ98 1225 aa19.52■□□□□ 0.72
PRDM5-207ENST00000505484 MBD3O95983 291 aa19.52■□□□□ 0.72
PRDM5-207ENST00000505484 ARHGAP45Q92619 1136 aa19.52■□□□□ 0.72
PRDM5-207ENST00000505484 KIAA2012Q0VF49 1180 aa19.51■□□□□ 0.71
PRDM5-207ENST00000505484 PRIMPOLQ96LW4 560 aa19.51■□□□□ 0.71
PRDM5-207ENST00000505484 PIK3C2BO00750 1634 aa19.5■□□□□ 0.71
PRDM5-207ENST00000505484 ANKRD36BQ8N2N9 1353 aa19.5■□□□□ 0.71
PRDM5-207ENST00000505484 TMEM63CQ9P1W3 806 aa19.5■□□□□ 0.71
PRDM5-207ENST00000505484 HMGN5P82970 282 aaKnown RBP19.49■□□□□ 0.71
PRDM5-207ENST00000505484 USP26Q9BXU7 913 aa19.49■□□□□ 0.71
PRDM5-207ENST00000505484 RBM27Q9P2N5 1060 aaKnown RBP19.49■□□□□ 0.71
PRDM5-207ENST00000505484 QRICH2Q9H0J4 1663 aa19.49■□□□□ 0.71
PRDM5-207ENST00000505484 ZSCAN20P17040 1043 aaPredicted RBP19.49■□□□□ 0.71
PRDM5-207ENST00000505484 SLC52A1Q9NWF4 448 aa19.49■□□□□ 0.71
PRDM5-207ENST00000505484 AK9Q5TCS8 1911 aa19.49■□□□□ 0.71
PRDM5-207ENST00000505484 ST18O60284 1047 aa19.48■□□□□ 0.71
PRDM5-207ENST00000505484 GTF2F1P35269 517 aaKnown RBP eCLIP19.48■□□□□ 0.71
PRDM5-207ENST00000505484 PKP1Q13835 747 aa19.48■□□□□ 0.71
PRDM5-207ENST00000505484 PTCH1Q13635 1447 aa19.47■□□□□ 0.71
PRDM5-207ENST00000505484 SYCE3A1L190 88 aa19.47■□□□□ 0.71
PRDM5-207ENST00000505484 GTPBP4Q9BZE4 634 aaKnown RBP19.47■□□□□ 0.71
PRDM5-207ENST00000505484 COL3A1P02461 1466 aaPredicted RBP19.47■□□□□ 0.71
PRDM5-207ENST00000505484 GSPT1P15170 499 aaKnown RBP19.47■□□□□ 0.71
PRDM5-207ENST00000505484 TRAK1Q9UPV9 953 aa19.47■□□□□ 0.71
PRDM5-207ENST00000505484 ZDHHC9Q9Y397 364 aa19.47■□□□□ 0.71
PRDM5-207ENST00000505484 INTS3Q68E01 1043 aaKnown RBP19.46■□□□□ 0.71
PRDM5-207ENST00000505484 SIRT2Q8IXJ6 389 aa19.46■□□□□ 0.71
PRDM5-207ENST00000505484 PPLO60437 1756 aa19.45■□□□□ 0.7
PRDM5-207ENST00000505484 U2SURPO15042 1029 aaKnown RBP19.44■□□□□ 0.7
PRDM5-207ENST00000505484 PTMAP06454 111 aaKnown RBP19.44■□□□□ 0.7
PRDM5-207ENST00000505484 PLEKHM2Q8IWE5 1019 aa19.44■□□□□ 0.7
PRDM5-207ENST00000505484 TTC22Q5TAA0 569 aa19.44■□□□□ 0.7
PRDM5-207ENST00000505484 PPP6R1Q9UPN7 881 aa19.44■□□□□ 0.7
PRDM5-207ENST00000505484 TMEM131LA2VDJ0 1609 aa19.43■□□□□ 0.7
PRDM5-207ENST00000505484 NEXMIFQ5QGS0 1516 aa19.43■□□□□ 0.7
PRDM5-207ENST00000505484 SYAP1Q96A49 352 aaPredicted RBP19.43■□□□□ 0.7
PRDM5-207ENST00000505484 TSPY26PQ9H489 355 aa19.43■□□□□ 0.7
PRDM5-207ENST00000505484 C14orf93Q9H972 538 aaKnown RBP19.43■□□□□ 0.7
PRDM5-207ENST00000505484 PRDM10Q9NQV6 1147 aa19.43■□□□□ 0.7
PRDM5-207ENST00000505484 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.43■□□□□ 0.7
PRDM5-207ENST00000505484 KIF20AO95235 890 aa19.43■□□□□ 0.7
PRDM5-207ENST00000505484 SAFB2Q14151 953 aaKnown RBP eCLIP19.43■□□□□ 0.7
PRDM5-207ENST00000505484 STK26Q9P289 416 aa19.43■□□□□ 0.7
PRDM5-207ENST00000505484 ZHX1Q9UKY1 873 aaPredicted RBP19.43■□□□□ 0.7
PRDM5-207ENST00000505484 ZGPATQ8N5A5 531 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms