RNA–Protein interactions for RNA: ENST00000505441.1

GRAMD2B-205, Transcript of GRAM domain containing 2B, humanhuman

TSL 3

Gene GRAMD2B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-205ENST00000505441 ATN1P54259 1190 aaPredicted RBP11.22□□□□□ -0.61
GRAMD2B-205ENST00000505441 CHRNA2Q15822 529 aa11.22□□□□□ -0.61
GRAMD2B-205ENST00000505441 NBPF1Q3BBV0 1214 aa11.22□□□□□ -0.61
GRAMD2B-205ENST00000505441 NUTM2GQ5VZR2 741 aa11.22□□□□□ -0.61
GRAMD2B-205ENST00000505441 TOPAZ1Q8N9V7 1692 aa11.22□□□□□ -0.61
GRAMD2B-205ENST00000505441 SLC39A7Q92504 469 aa11.22□□□□□ -0.61
GRAMD2B-205ENST00000505441 KIAA0232Q92628 1395 aa11.22□□□□□ -0.61
GRAMD2B-205ENST00000505441 PHRF1Q9P1Y6 1649 aaKnown RBP11.22□□□□□ -0.61
GRAMD2B-205ENST00000505441 TRPC6Q9Y210 931 aa11.22□□□□□ -0.61
GRAMD2B-205ENST00000505441 THSD7AQ9UPZ6 1657 aa11.21□□□□□ -0.61
GRAMD2B-205ENST00000505441 KIAA1210Q9ULL0 1709 aa11.21□□□□□ -0.62
GRAMD2B-205ENST00000505441 POLR3AO14802 1390 aaPredicted RBP11.2□□□□□ -0.62
GRAMD2B-205ENST00000505441 ACEP12821 1306 aa11.2□□□□□ -0.62
GRAMD2B-205ENST00000505441 C7P10643 843 aa11.2□□□□□ -0.62
GRAMD2B-205ENST00000505441 ZC3H6P61129 1189 aaKnown RBP11.2□□□□□ -0.62
GRAMD2B-205ENST00000505441 NBPF8Q3BBV2 869 aa11.2□□□□□ -0.62
GRAMD2B-205ENST00000505441 BAG6P46379 1132 aa11.19□□□□□ -0.62
GRAMD2B-205ENST00000505441 STRN4Q9NRL3 753 aa11.19□□□□□ -0.62
GRAMD2B-205ENST00000505441 BMP2KQ9NSY1 1161 aaPredicted RBP11.19□□□□□ -0.62
GRAMD2B-205ENST00000505441 SPATA31A1Q5TZJ5 1347 aa11.18□□□□□ -0.62
GRAMD2B-205ENST00000505441 PLEKHG3A1L390 1219 aa11.18□□□□□ -0.62
GRAMD2B-205ENST00000505441 NUBP1P53384 320 aa11.18□□□□□ -0.62
GRAMD2B-205ENST00000505441 RGPD1P0DJD0 1748 aa11.18□□□□□ -0.62
GRAMD2B-205ENST00000505441 NRKQ7Z2Y5 1582 aa11.17□□□□□ -0.62
GRAMD2B-205ENST00000505441 PSDA5PKW4 1024 aaPredicted RBP11.17□□□□□ -0.62
GRAMD2B-205ENST00000505441 EN1Q05925 392 aaPredicted RBP11.17□□□□□ -0.62
GRAMD2B-205ENST00000505441 TNS1Q9HBL0 1735 aaKnown RBP11.17□□□□□ -0.62
GRAMD2B-205ENST00000505441 SRPK2P78362 688 aaKnown RBP11.16□□□□□ -0.62
GRAMD2B-205ENST00000505441 ABTB2Q8N961 1025 aa11.16□□□□□ -0.62
GRAMD2B-205ENST00000505441 USP35Q9P2H5 1018 aa11.16□□□□□ -0.62
GRAMD2B-205ENST00000505441 CAMTA1Q9Y6Y1 1673 aa11.16□□□□□ -0.62
GRAMD2B-205ENST00000505441 PPIP5K1Q6PFW1 1433 aa11.16□□□□□ -0.62
GRAMD2B-205ENST00000505441 SSH2Q76I76 1423 aa11.16□□□□□ -0.62
GRAMD2B-205ENST00000505441 USP19O94966 1318 aa11.15□□□□□ -0.62
GRAMD2B-205ENST00000505441 CENPJQ9HC77 1338 aaPredicted RBP11.15□□□□□ -0.62
GRAMD2B-205ENST00000505441 LMO7Q8WWI1 1683 aa11.15□□□□□ -0.62
GRAMD2B-205ENST00000505441 CABP2Q9NPB3 220 aa11.15□□□□□ -0.62
GRAMD2B-205ENST00000505441 LRP5O75197 1615 aa11.15□□□□□ -0.62
GRAMD2B-205ENST00000505441 QRICH2Q9H0J4 1663 aa11.14□□□□□ -0.63
GRAMD2B-205ENST00000505441 EVA1CP58658 441 aa11.14□□□□□ -0.63
GRAMD2B-205ENST00000505441 EZH2Q15910 746 aaKnown RBP11.14□□□□□ -0.63
GRAMD2B-205ENST00000505441 LARP1Q6PKG0 1096 aaKnown RBP11.14□□□□□ -0.63
GRAMD2B-205ENST00000505441 FAM212AQ96EL1 285 aa11.14□□□□□ -0.63
GRAMD2B-205ENST00000505441 PCDHB13Q9Y5F0 798 aa11.14□□□□□ -0.63
GRAMD2B-205ENST00000505441 DISP2A7MBM2 1401 aa11.14□□□□□ -0.63
GRAMD2B-205ENST00000505441 CPDO75976 1380 aa11.14□□□□□ -0.63
GRAMD2B-205ENST00000505441 TRIM37O94972 964 aa11.13□□□□□ -0.63
GRAMD2B-205ENST00000505441 GCP02774 474 aa11.13□□□□□ -0.63
GRAMD2B-205ENST00000505441 TIE1P35590 1138 aa11.13□□□□□ -0.63
GRAMD2B-205ENST00000505441 L3MBTL2Q969R5 705 aa11.13□□□□□ -0.63
GRAMD2B-205ENST00000505441 R3HDM1Q15032 1099 aaKnown RBP11.12□□□□□ -0.63
GRAMD2B-205ENST00000505441 FAM196AQ6ZSG2 479 aa11.12□□□□□ -0.63
GRAMD2B-205ENST00000505441 BARGINQ6ZT62 677 aa11.12□□□□□ -0.63
GRAMD2B-205ENST00000505441 NLRP13Q86W25 1043 aa11.12□□□□□ -0.63
GRAMD2B-205ENST00000505441 CAMKK2Q96RR4 588 aa11.12□□□□□ -0.63
GRAMD2B-205ENST00000505441 FBXO3Q9UK99 471 aa11.12□□□□□ -0.63
GRAMD2B-205ENST00000505441 USP6P35125 1406 aa11.11□□□□□ -0.63
GRAMD2B-205ENST00000505441 TCP11L2Q8N4U5 519 aa11.11□□□□□ -0.63
GRAMD2B-205ENST00000505441 SIN3AQ96ST3 1273 aa11.11□□□□□ -0.63
GRAMD2B-205ENST00000505441 CABP1Q9NZU7 370 aa11.11□□□□□ -0.63
GRAMD2B-205ENST00000505441 COL5A2P05997 1499 aaPredicted RBP11.11□□□□□ -0.63
GRAMD2B-205ENST00000505441 ZBTB7CA1YPR0 619 aa11.1□□□□□ -0.63
GRAMD2B-205ENST00000505441 TTLL13PA6NNM8 815 aa11.1□□□□□ -0.63
GRAMD2B-205ENST00000505441 APBA3O96018 575 aa11.1□□□□□ -0.63
GRAMD2B-205ENST00000505441 POTEJP0CG39 1038 aa11.1□□□□□ -0.63
GRAMD2B-205ENST00000505441 PDE3BQ13370 1112 aa11.1□□□□□ -0.63
GRAMD2B-205ENST00000505441 SLIT3O75094 1523 aa11.09□□□□□ -0.63
GRAMD2B-205ENST00000505441 TRPM1Q7Z4N2 1603 aa11.09□□□□□ -0.63
GRAMD2B-205ENST00000505441 BRD4O60885 1362 aaPredicted RBP11.09□□□□□ -0.63
GRAMD2B-205ENST00000505441 NLRP6P59044 892 aa11.09□□□□□ -0.63
GRAMD2B-205ENST00000505441 DCAF8Q5TAQ9 597 aa11.09□□□□□ -0.63
GRAMD2B-205ENST00000505441 PIK3C2AO00443 1686 aa11.08□□□□□ -0.64
GRAMD2B-205ENST00000505441 SGIP1Q9BQI5 828 aa11.08□□□□□ -0.64
GRAMD2B-205ENST00000505441 THRAP3Q9Y2W1 955 aaKnown RBP11.08□□□□□ -0.64
GRAMD2B-205ENST00000505441 CRB1P82279 1406 aa11.08□□□□□ -0.64
GRAMD2B-205ENST00000505441 EVC2Q86UK5 1308 aa11.08□□□□□ -0.64
GRAMD2B-205ENST00000505441 PARP4Q9UKK3 1724 aaKnown RBP11.07□□□□□ -0.64
GRAMD2B-205ENST00000505441 NEUROD1Q13562 356 aa11.07□□□□□ -0.64
GRAMD2B-205ENST00000505441 IFNL1Q8IU54 200 aa11.07□□□□□ -0.64
GRAMD2B-205ENST00000505441 RREB1Q92766 1687 aa11.07□□□□□ -0.64
GRAMD2B-205ENST00000505441 NUP188Q5SRE5 1749 aa11.06□□□□□ -0.64
GRAMD2B-205ENST00000505441 ROCK2O75116 1388 aaKnown RBP11.06□□□□□ -0.64
GRAMD2B-205ENST00000505441 AATKQ6ZMQ8 1374 aa11.06□□□□□ -0.64
GRAMD2B-205ENST00000505441 PARD3Q8TEW0 1356 aa11.06□□□□□ -0.64
GRAMD2B-205ENST00000505441 COL18A1P39060 1754 aa11.06□□□□□ -0.64
GRAMD2B-205ENST00000505441 MAMSTRQ6ZN01 415 aa11.06□□□□□ -0.64
GRAMD2B-205ENST00000505441 POTEFA5A3E0 1075 aa11.05□□□□□ -0.64
GRAMD2B-205ENST00000505441 SEC24BO95487 1268 aa11.05□□□□□ -0.64
GRAMD2B-205ENST00000505441 TRIM35Q9UPQ4 493 aa11.05□□□□□ -0.64
GRAMD2B-205ENST00000505441 AXIN2Q9Y2T1 843 aa11.05□□□□□ -0.64
GRAMD2B-205ENST00000505441 LRRC37A3O60309 1634 aa11.05□□□□□ -0.64
GRAMD2B-205ENST00000505441 TTC21BQ7Z4L5 1316 aa11.05□□□□□ -0.64
GRAMD2B-205ENST00000505441 PEAK1Q9H792 1746 aa11.04□□□□□ -0.64
GRAMD2B-205ENST00000505441 CPSF1Q10570 1443 aaKnown RBP11.04□□□□□ -0.64
GRAMD2B-205ENST00000505441 AKAP12Q02952 1782 aa11.04□□□□□ -0.64
GRAMD2B-205ENST00000505441 TOM1L2Q6ZVM7 507 aa11.04□□□□□ -0.64
GRAMD2B-205ENST00000505441 KLHL34Q8N239 644 aa11.04□□□□□ -0.64
GRAMD2B-205ENST00000505441 RGPD5Q99666 1765 aa11.03□□□□□ -0.64
GRAMD2B-205ENST00000505441 OVOS2A0A0G2JMS6 1433 aa11.03□□□□□ -0.64
GRAMD2B-205ENST00000505441 OVOS2A0A0J9YW53 1432 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms