RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 ATP7BP35670 1465 aa6.66□□□□□ -1.34
CPNE4-204ENST00000505331 TULP4Q9NRJ4 1543 aa6.66□□□□□ -1.34
CPNE4-204ENST00000505331 DDB1Q16531 1140 aa6.65□□□□□ -1.34
CPNE4-204ENST00000505331 ZNF827Q17R98 1081 aa6.65□□□□□ -1.34
CPNE4-204ENST00000505331 NMRK2Q9NPI5 230 aa6.65□□□□□ -1.34
CPNE4-204ENST00000505331 ANKRD50Q9ULJ7 1429 aa6.65□□□□□ -1.35
CPNE4-204ENST00000505331 GPRASP1Q5JY77 1395 aa6.64□□□□□ -1.35
CPNE4-204ENST00000505331 PCNTO95613 3336 aa6.63□□□□□ -1.35
CPNE4-204ENST00000505331 CTCFP49711 727 aaPredicted RBP6.63□□□□□ -1.35
CPNE4-204ENST00000505331 SMC1BQ8NDV3 1235 aa6.63□□□□□ -1.35
CPNE4-204ENST00000505331 PEAK1Q9H792 1746 aa6.62□□□□□ -1.35
CPNE4-204ENST00000505331 BRD4O60885 1362 aaPredicted RBP6.62□□□□□ -1.35
CPNE4-204ENST00000505331 PNPLA7Q6ZV29 1317 aa6.62□□□□□ -1.35
CPNE4-204ENST00000505331 FOXN1O15353 648 aa6.62□□□□□ -1.35
CPNE4-204ENST00000505331 ZC3H6P61129 1189 aaKnown RBP6.62□□□□□ -1.35
CPNE4-204ENST00000505331 MARCH10Q8NA82 808 aaPredicted RBP6.62□□□□□ -1.35
CPNE4-204ENST00000505331 AKT1S1Q96B36 256 aa6.62□□□□□ -1.35
CPNE4-204ENST00000505331 ABCC11Q96J66 1382 aa6.61□□□□□ -1.35
CPNE4-204ENST00000505331 ANKRD30BQ9BXX2 1392 aa6.61□□□□□ -1.35
CPNE4-204ENST00000505331 PLEKHH1Q9ULM0 1364 aa6.61□□□□□ -1.35
CPNE4-204ENST00000505331 ACIN1Q9UKV3 1341 aaKnown RBP6.61□□□□□ -1.35
CPNE4-204ENST00000505331 CCDC85CA6NKD9 419 aa6.61□□□□□ -1.35
CPNE4-204ENST00000505331 STK26Q9P289 416 aa6.61□□□□□ -1.35
CPNE4-204ENST00000505331 PAK3O75914 559 aaPredicted RBP6.6□□□□□ -1.35
CPNE4-204ENST00000505331 AIDAQ96BJ3 306 aa6.6□□□□□ -1.35
CPNE4-204ENST00000505331 CDCA7Q9BWT1 371 aaPredicted RBP6.6□□□□□ -1.35
CPNE4-204ENST00000505331 SLC4A1APQ9BWU0 796 aaKnown RBP6.6□□□□□ -1.35
CPNE4-204ENST00000505331 FOXD4L1Q9NU39 408 aa6.6□□□□□ -1.35
CPNE4-204ENST00000505331 TFCP2L1Q9NZI6 479 aa6.6□□□□□ -1.35
CPNE4-204ENST00000505331 CRB1P82279 1406 aa6.59□□□□□ -1.35
CPNE4-204ENST00000505331 C10orf71Q711Q0 1435 aa6.59□□□□□ -1.35
CPNE4-204ENST00000505331 ARHGEF28Q8N1W1 1705 aaKnown RBP6.59□□□□□ -1.35
CPNE4-204ENST00000505331 FMN2Q9NZ56 1722 aa6.59□□□□□ -1.35
CPNE4-204ENST00000505331 E9PCH4 1651 aa6.59□□□□□ -1.35
CPNE4-204ENST00000505331 RPGRIP1LQ68CZ1 1315 aa6.59□□□□□ -1.35
CPNE4-204ENST00000505331 PAPPAQ13219 1627 aa6.59□□□□□ -1.35
CPNE4-204ENST00000505331 PHRF1Q9P1Y6 1649 aaKnown RBP6.59□□□□□ -1.35
CPNE4-204ENST00000505331 SIRT1Q96EB6 747 aa6.59□□□□□ -1.35
CPNE4-204ENST00000505331 LRRC4BQ9NT99 713 aa6.59□□□□□ -1.35
CPNE4-204ENST00000505331 PARP4Q9UKK3 1724 aaKnown RBP6.59□□□□□ -1.36
CPNE4-204ENST00000505331 ANKARQ7Z5J8 1434 aa6.59□□□□□ -1.36
CPNE4-204ENST00000505331 IGSF1Q8N6C5 1336 aa6.58□□□□□ -1.36
CPNE4-204ENST00000505331 KDM2BQ8NHM5 1336 aa6.58□□□□□ -1.36
CPNE4-204ENST00000505331 SLC27A3Q5K4L6 730 aa6.58□□□□□ -1.36
CPNE4-204ENST00000505331 KIAA1210Q9ULL0 1709 aa6.58□□□□□ -1.36
CPNE4-204ENST00000505331 TOPAZ1Q8N9V7 1692 aa6.58□□□□□ -1.36
CPNE4-204ENST00000505331 CPDO75976 1380 aa6.57□□□□□ -1.36
CPNE4-204ENST00000505331 LBX1P52954 281 aa6.57□□□□□ -1.36
CPNE4-204ENST00000505331 PRPF38BQ5VTL8 546 aaKnown RBP6.57□□□□□ -1.36
CPNE4-204ENST00000505331 HIRIP3Q9BW71 556 aaPredicted RBP6.57□□□□□ -1.36
CPNE4-204ENST00000505331 ZBTB12Q9Y330 459 aaPredicted RBP6.57□□□□□ -1.36
CPNE4-204ENST00000505331 CLTCL1P53675 1640 aa6.57□□□□□ -1.36
CPNE4-204ENST00000505331 NUP155O75694 1391 aa6.57□□□□□ -1.36
CPNE4-204ENST00000505331 PXDNLA1KZ92 1463 aa6.56□□□□□ -1.36
CPNE4-204ENST00000505331 COL5A2P05997 1499 aaPredicted RBP6.56□□□□□ -1.36
CPNE4-204ENST00000505331 KANK4Q5T7N3 995 aaPredicted RBP6.56□□□□□ -1.36
CPNE4-204ENST00000505331 NGDNQ8NEJ9 315 aaKnown RBP6.56□□□□□ -1.36
CPNE4-204ENST00000505331 RRAGCQ9HB90 399 aa6.56□□□□□ -1.36
CPNE4-204ENST00000505331 COL24A1Q17RW2 1714 aa6.56□□□□□ -1.36
CPNE4-204ENST00000505331 PLEKHG2Q9H7P9 1386 aa6.56□□□□□ -1.36
CPNE4-204ENST00000505331 ALS2Q96Q42 1657 aa6.55□□□□□ -1.36
CPNE4-204ENST00000505331 EXOC5O00471 708 aa6.55□□□□□ -1.36
CPNE4-204ENST00000505331 TOM1L2Q6ZVM7 507 aa6.55□□□□□ -1.36
CPNE4-204ENST00000505331 TRPM3Q9HCF6 1732 aaPredicted RBP6.55□□□□□ -1.36
CPNE4-204ENST00000505331 LRRC37A3O60309 1634 aa6.54□□□□□ -1.36
CPNE4-204ENST00000505331 CICQ96RK0 1608 aaPredicted RBP6.54□□□□□ -1.36
CPNE4-204ENST00000505331 MSL1Q68DK7 614 aa6.54□□□□□ -1.36
CPNE4-204ENST00000505331 REM2Q8IYK8 340 aaPredicted RBP6.54□□□□□ -1.36
CPNE4-204ENST00000505331 ACSBG1Q96GR2 724 aa6.54□□□□□ -1.36
CPNE4-204ENST00000505331 CFAP44Q96MT7 982 aa6.54□□□□□ -1.36
CPNE4-204ENST00000505331 CREBZFQ9NS37 354 aa6.54□□□□□ -1.36
CPNE4-204ENST00000505331 WBP1LQ9NX94 342 aa6.54□□□□□ -1.36
CPNE4-204ENST00000505331 MKRN1Q9UHC7 482 aaKnown RBP6.54□□□□□ -1.36
CPNE4-204ENST00000505331 USP6P35125 1406 aa6.53□□□□□ -1.36
CPNE4-204ENST00000505331 C9orf131Q5VYM1 1079 aa6.53□□□□□ -1.36
CPNE4-204ENST00000505331 TMEM132EQ6IEE7 984 aa6.53□□□□□ -1.36
CPNE4-204ENST00000505331 ARHGAP27Q6ZUM4 889 aa6.53□□□□□ -1.36
CPNE4-204ENST00000505331 COL23A1Q86Y22 540 aaPredicted RBP6.53□□□□□ -1.36
CPNE4-204ENST00000505331 EIF3AQ14152 1382 aaKnown RBP6.53□□□□□ -1.36
CPNE4-204ENST00000505331 CRYBG1Q9Y4K1 1723 aa6.53□□□□□ -1.36
CPNE4-204ENST00000505331 YTHDC2Q9H6S0 1430 aaKnown RBP6.52□□□□□ -1.37
CPNE4-204ENST00000505331 HSPA8P11142 646 aaKnown RBP6.52□□□□□ -1.37
CPNE4-204ENST00000505331 NUTM2GQ5VZR2 741 aa6.52□□□□□ -1.37
CPNE4-204ENST00000505331 GCC1Q96CN9 775 aa6.52□□□□□ -1.37
CPNE4-204ENST00000505331 SBF2Q86WG5 1849 aa6.52□□□□□ -1.37
CPNE4-204ENST00000505331 LMO7Q8WWI1 1683 aa6.52□□□□□ -1.37
CPNE4-204ENST00000505331 KCPQ6ZWJ8 1503 aa6.51□□□□□ -1.37
CPNE4-204ENST00000505331 GCP02774 474 aa6.51□□□□□ -1.37
CPNE4-204ENST00000505331 SP7Q8TDD2 431 aaPredicted RBP6.51□□□□□ -1.37
CPNE4-204ENST00000505331 CNTNAP1P78357 1384 aa6.51□□□□□ -1.37
CPNE4-204ENST00000505331 ADGRF5Q8IZF2 1346 aa6.5□□□□□ -1.37
CPNE4-204ENST00000505331 WDR17Q8IZU2 1322 aa6.5□□□□□ -1.37
CPNE4-204ENST00000505331 DLL1O00548 723 aa6.5□□□□□ -1.37
CPNE4-204ENST00000505331 VEGFAP15692 232 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-204ENST00000505331 SAFB2Q14151 953 aaKnown RBP eCLIP6.5□□□□□ -1.37
CPNE4-204ENST00000505331 PIP4P2Q8N4L2 257 aa6.5□□□□□ -1.37
CPNE4-204ENST00000505331 FLAD1Q8NFF5 587 aa6.5□□□□□ -1.37
CPNE4-204ENST00000505331 PRAM1Q96QH2 718 aa6.5□□□□□ -1.37
CPNE4-204ENST00000505331 CARD10Q9BWT7 1032 aa6.5□□□□□ -1.37
CPNE4-204ENST00000505331 BCS1LQ9Y276 419 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms