RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
CDH6-202ENST00000504835 DPY19L2Q6NUT2 758 aa12.72□□□□□ -0.37
CDH6-202ENST00000504835 TRPM3Q9HCF6 1732 aaPredicted RBP12.71□□□□□ -0.37
CDH6-202ENST00000504835 RALGAPBQ86X10 1494 aa12.71□□□□□ -0.37
CDH6-202ENST00000504835 SPATA31A3Q5VYP0 1347 aa12.71□□□□□ -0.37
CDH6-202ENST00000504835 NRAPQ86VF7 1730 aa12.7□□□□□ -0.38
CDH6-202ENST00000504835 GJD4Q96KN9 370 aaPredicted RBP12.7□□□□□ -0.38
CDH6-202ENST00000504835 DOK7Q18PE1 504 aa12.69□□□□□ -0.38
CDH6-202ENST00000504835 CRYBG1Q9Y4K1 1723 aa12.69□□□□□ -0.38
CDH6-202ENST00000504835 ALS2Q96Q42 1657 aa12.69□□□□□ -0.38
CDH6-202ENST00000504835 ADGRB2O60241 1585 aa12.69□□□□□ -0.38
CDH6-202ENST00000504835 HOXB3P14651 431 aaPredicted RBP12.69□□□□□ -0.38
CDH6-202ENST00000504835 SPOCK2Q92563 424 aa12.69□□□□□ -0.38
CDH6-202ENST00000504835 C14orf93Q9H972 538 aaKnown RBP12.69□□□□□ -0.38
CDH6-202ENST00000504835 CIZ1Q9ULV3 898 aaPredicted RBP12.69□□□□□ -0.38
CDH6-202ENST00000504835 TNS3Q68CZ2 1445 aa12.68□□□□□ -0.38
CDH6-202ENST00000504835 ADGRB1O14514 1584 aa12.68□□□□□ -0.38
CDH6-202ENST00000504835 CFAP70Q5T0N1 1121 aa12.68□□□□□ -0.38
CDH6-202ENST00000504835 KRT28Q7Z3Y7 464 aa12.68□□□□□ -0.38
CDH6-202ENST00000504835 SIRT1Q96EB6 747 aa12.68□□□□□ -0.38
CDH6-202ENST00000504835 DLC1Q96QB1 1528 aa12.68□□□□□ -0.38
CDH6-202ENST00000504835 HOXB1P14653 301 aaPredicted RBP12.67□□□□□ -0.38
CDH6-202ENST00000504835 UNC5CLQ8IV45 518 aa12.67□□□□□ -0.38
CDH6-202ENST00000504835 RIMBP2O15034 1052 aa12.65□□□□□ -0.38
CDH6-202ENST00000504835 CABLES1Q8TDN4 633 aa12.65□□□□□ -0.38
CDH6-202ENST00000504835 PHF8Q9UPP1 1060 aa12.65□□□□□ -0.38
CDH6-202ENST00000504835 ERBB3P21860 1342 aa12.65□□□□□ -0.38
CDH6-202ENST00000504835 SBNO1A3KN83 1393 aa12.64□□□□□ -0.39
CDH6-202ENST00000504835 DHX57Q6P158 1386 aaKnown RBP12.64□□□□□ -0.39
CDH6-202ENST00000504835 ARHGEF28Q8N1W1 1705 aaKnown RBP12.64□□□□□ -0.39
CDH6-202ENST00000504835 CCDC125Q86Z20 511 aa12.64□□□□□ -0.39
CDH6-202ENST00000504835 PRAM1Q96QH2 718 aa12.64□□□□□ -0.39
CDH6-202ENST00000504835 SAFB2Q14151 953 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDH6-202ENST00000504835 BLMP54132 1417 aaPredicted RBP12.62□□□□□ -0.39
CDH6-202ENST00000504835 ANKARQ7Z5J8 1434 aa12.62□□□□□ -0.39
CDH6-202ENST00000504835 COL14A1Q05707 1796 aaKnown RBP12.62□□□□□ -0.39
CDH6-202ENST00000504835 ITSN1Q15811 1721 aa12.61□□□□□ -0.39
CDH6-202ENST00000504835 VPS72Q15906 364 aa12.61□□□□□ -0.39
CDH6-202ENST00000504835 PSME1Q06323 249 aa12.6□□□□□ -0.39
CDH6-202ENST00000504835 AMER1Q5JTC6 1135 aaPredicted RBP12.6□□□□□ -0.39
CDH6-202ENST00000504835 DEFB132Q7Z7B7 95 aa12.6□□□□□ -0.39
CDH6-202ENST00000504835 SEPT12Q8IYM1 358 aa12.6□□□□□ -0.39
CDH6-202ENST00000504835 PMFBP1Q8TBY8 1022 aa12.6□□□□□ -0.39
CDH6-202ENST00000504835 TULP4Q9NRJ4 1543 aa12.6□□□□□ -0.39
CDH6-202ENST00000504835 FAM83GA6ND36 823 aa12.6□□□□□ -0.39
CDH6-202ENST00000504835 ONECUT3O60422 494 aaPredicted RBP12.6□□□□□ -0.39
CDH6-202ENST00000504835 PRR36Q9H6K5 1346 aa12.6□□□□□ -0.39
CDH6-202ENST00000504835 ARHGEF10O15013 1369 aa12.6□□□□□ -0.39
CDH6-202ENST00000504835 RAB3GAP2Q9H2M9 1393 aa12.6□□□□□ -0.39
CDH6-202ENST00000504835 PHRF1Q9P1Y6 1649 aaKnown RBP12.6□□□□□ -0.39
CDH6-202ENST00000504835 RGPD1P0DJD0 1748 aa12.59□□□□□ -0.39
CDH6-202ENST00000504835 TNS1Q9HBL0 1735 aaKnown RBP12.59□□□□□ -0.39
CDH6-202ENST00000504835 THSD7AQ9UPZ6 1657 aa12.58□□□□□ -0.4
CDH6-202ENST00000504835 LRP5O75197 1615 aa12.58□□□□□ -0.4
CDH6-202ENST00000504835 HAP1P54257 671 aaPredicted RBP12.58□□□□□ -0.4
CDH6-202ENST00000504835 TOPAZ1Q8N9V7 1692 aa12.58□□□□□ -0.4
CDH6-202ENST00000504835 LMOD2Q6P5Q4 547 aa12.57□□□□□ -0.4
CDH6-202ENST00000504835 HIRIP3Q9BW71 556 aaPredicted RBP12.57□□□□□ -0.4
CDH6-202ENST00000504835 POGKQ9P215 609 aa12.57□□□□□ -0.4
CDH6-202ENST00000504835 TRAK1Q9UPV9 953 aa12.56□□□□□ -0.4
CDH6-202ENST00000504835 MINK1Q8N4C8 1332 aaPredicted RBP12.56□□□□□ -0.4
CDH6-202ENST00000504835 ACIN1Q9UKV3 1341 aaKnown RBP12.56□□□□□ -0.4
CDH6-202ENST00000504835 IFNLR1Q8IU57 520 aaPredicted RBP12.56□□□□□ -0.4
CDH6-202ENST00000504835 KRT27Q7Z3Y8 459 aa12.55□□□□□ -0.4
CDH6-202ENST00000504835 RNF166Q96A37 237 aaPredicted RBP12.55□□□□□ -0.4
CDH6-202ENST00000504835 CCDC9Q9Y3X0 531 aaKnown RBP12.55□□□□□ -0.4
CDH6-202ENST00000504835 ATP7BP35670 1465 aa12.55□□□□□ -0.4
CDH6-202ENST00000504835 WASLO00401 505 aaPredicted RBP12.53□□□□□ -0.4
CDH6-202ENST00000504835 FAM98CQ17RN3 349 aaKnown RBP12.53□□□□□ -0.4
CDH6-202ENST00000504835 ZSWIM6Q9HCJ5 1215 aa12.53□□□□□ -0.4
CDH6-202ENST00000504835 BTG4Q9NY30 223 aa12.53□□□□□ -0.4
CDH6-202ENST00000504835 KDM2AQ9Y2K7 1162 aa12.53□□□□□ -0.4
CDH6-202ENST00000504835 KIAA1210Q9ULL0 1709 aa12.53□□□□□ -0.4
CDH6-202ENST00000504835 VARS2Q5ST30 1063 aaKnown RBP12.52□□□□□ -0.4
CDH6-202ENST00000504835 EIF3AQ14152 1382 aaKnown RBP12.52□□□□□ -0.41
CDH6-202ENST00000504835 EFCAB3Q8N7B9 438 aa12.52□□□□□ -0.41
CDH6-202ENST00000504835 DCAF11Q8TEB1 546 aa12.52□□□□□ -0.41
CDH6-202ENST00000504835 GPRASP1Q5JY77 1395 aa12.51□□□□□ -0.41
CDH6-202ENST00000504835 SPATA31A5Q5VU36 1347 aa12.51□□□□□ -0.41
CDH6-202ENST00000504835 SPATA31A7Q8IWB4 1347 aa12.51□□□□□ -0.41
CDH6-202ENST00000504835 NRKQ7Z2Y5 1582 aa12.5□□□□□ -0.41
CDH6-202ENST00000504835 SF3B2Q13435 895 aaKnown RBP12.5□□□□□ -0.41
CDH6-202ENST00000504835 FAM182BQ5T319 152 aa12.5□□□□□ -0.41
CDH6-202ENST00000504835 LMO7Q8WWI1 1683 aa12.5□□□□□ -0.41
CDH6-202ENST00000504835 RREB1Q92766 1687 aa12.49□□□□□ -0.41
CDH6-202ENST00000504835 A0A0G2JS52 829 aa12.48□□□□□ -0.41
CDH6-202ENST00000504835 PSDA5PKW4 1024 aaPredicted RBP12.48□□□□□ -0.41
CDH6-202ENST00000504835 MYT1Q01538 1121 aa12.48□□□□□ -0.41
CDH6-202ENST00000504835 KIAA0232Q92628 1395 aa12.48□□□□□ -0.41
CDH6-202ENST00000504835 NGDNQ8NEJ9 315 aaKnown RBP12.47□□□□□ -0.41
CDH6-202ENST00000504835 NUDT16Q96DE0 195 aaKnown RBP12.47□□□□□ -0.41
CDH6-202ENST00000504835 DISP2A7MBM2 1401 aa12.47□□□□□ -0.41
CDH6-202ENST00000504835 NUP188Q5SRE5 1749 aa12.47□□□□□ -0.41
CDH6-202ENST00000504835 BAG6P46379 1132 aa12.47□□□□□ -0.41
CDH6-202ENST00000504835 EN1Q05925 392 aaPredicted RBP12.47□□□□□ -0.41
CDH6-202ENST00000504835 MICALL2Q8IY33 904 aa12.47□□□□□ -0.41
CDH6-202ENST00000504835 SPATA31A1Q5TZJ5 1347 aa12.46□□□□□ -0.41
CDH6-202ENST00000504835 POLR3AO14802 1390 aaPredicted RBP12.46□□□□□ -0.41
CDH6-202ENST00000504835 CHRNA2Q15822 529 aa12.46□□□□□ -0.42
CDH6-202ENST00000504835 ZNF687Q8N1G0 1237 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms