RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 NGDNQ8NEJ9 315 aaKnown RBP11.44□□□□□ -0.58
RFC1-207ENST00000504554 NGLY1Q96IV0 654 aa11.44□□□□□ -0.58
RFC1-207ENST00000504554 RALGAPBQ86X10 1494 aa11.44□□□□□ -0.58
RFC1-207ENST00000504554 POLR3AO14802 1390 aaPredicted RBP11.43□□□□□ -0.58
RFC1-207ENST00000504554 SRPK2P78362 688 aaKnown RBP11.43□□□□□ -0.58
RFC1-207ENST00000504554 CARD11Q9BXL7 1154 aa11.43□□□□□ -0.58
RFC1-207ENST00000504554 QTRT2Q9H974 415 aaKnown RBP11.43□□□□□ -0.58
RFC1-207ENST00000504554 BCL9LQ86UU0 1499 aa11.43□□□□□ -0.58
RFC1-207ENST00000504554 TOPAZ1Q8N9V7 1692 aa11.43□□□□□ -0.58
RFC1-207ENST00000504554 QRICH2Q9H0J4 1663 aa11.43□□□□□ -0.58
RFC1-207ENST00000504554 PLSCR2Q9NRY7 297 aa11.42□□□□□ -0.58
RFC1-207ENST00000504554 USP21Q9UK80 565 aa11.42□□□□□ -0.58
RFC1-207ENST00000504554 ALS2Q96Q42 1657 aa11.41□□□□□ -0.58
RFC1-207ENST00000504554 RXRBP28702 533 aa11.41□□□□□ -0.58
RFC1-207ENST00000504554 IRX5P78411 483 aaPredicted RBP11.41□□□□□ -0.58
RFC1-207ENST00000504554 GSE1Q14687 1217 aa11.41□□□□□ -0.58
RFC1-207ENST00000504554 CABP1Q9NZU7 370 aa11.41□□□□□ -0.58
RFC1-207ENST00000504554 PPIP5K1Q6PFW1 1433 aa11.41□□□□□ -0.58
RFC1-207ENST00000504554 ARHGEF10O15013 1369 aa11.41□□□□□ -0.58
RFC1-207ENST00000504554 PLCG2P16885 1265 aa11.4□□□□□ -0.58
RFC1-207ENST00000504554 NUTM2GQ5VZR2 741 aa11.4□□□□□ -0.58
RFC1-207ENST00000504554 FAM163AQ96GL9 167 aaPredicted RBP11.4□□□□□ -0.58
RFC1-207ENST00000504554 ATRNO75882 1429 aa11.4□□□□□ -0.58
RFC1-207ENST00000504554 SLIT2O94813 1529 aa11.4□□□□□ -0.59
RFC1-207ENST00000504554 EVC2Q86UK5 1308 aa11.39□□□□□ -0.59
RFC1-207ENST00000504554 FAM83GA6ND36 823 aa11.39□□□□□ -0.59
RFC1-207ENST00000504554 RGS12O14924 1447 aa11.39□□□□□ -0.59
RFC1-207ENST00000504554 ECM2O94769 699 aaPredicted RBP11.39□□□□□ -0.59
RFC1-207ENST00000504554 ABCA3Q99758 1704 aa11.38□□□□□ -0.59
RFC1-207ENST00000504554 RBM6P78332 1123 aaKnown RBP11.38□□□□□ -0.59
RFC1-207ENST00000504554 ITSN1Q15811 1721 aa11.38□□□□□ -0.59
RFC1-207ENST00000504554 UNC5CLQ8IV45 518 aa11.37□□□□□ -0.59
RFC1-207ENST00000504554 TESK2Q96S53 571 aa11.37□□□□□ -0.59
RFC1-207ENST00000504554 TRPC5Q9UL62 973 aaPredicted RBP11.37□□□□□ -0.59
RFC1-207ENST00000504554 SSH2Q76I76 1423 aa11.36□□□□□ -0.59
RFC1-207ENST00000504554 MARF1Q9Y4F3 1742 aaKnown RBP11.36□□□□□ -0.59
RFC1-207ENST00000504554 CRYBG1Q9Y4K1 1723 aa11.36□□□□□ -0.59
RFC1-207ENST00000504554 ST20-MTHFSA0A0A6YYL1 179 aa11.36□□□□□ -0.59
RFC1-207ENST00000504554 HAP1P54257 671 aaPredicted RBP11.36□□□□□ -0.59
RFC1-207ENST00000504554 SBNO2Q9Y2G9 1366 aa11.36□□□□□ -0.59
RFC1-207ENST00000504554 CDK12Q9NYV4 1490 aaPredicted RBP11.36□□□□□ -0.59
RFC1-207ENST00000504554 USP6P35125 1406 aa11.35□□□□□ -0.59
RFC1-207ENST00000504554 CLSPNQ9HAW4 1339 aa11.35□□□□□ -0.59
RFC1-207ENST00000504554 CHRM1P11229 460 aaPredicted RBP11.34□□□□□ -0.59
RFC1-207ENST00000504554 ZNF467Q7Z7K2 595 aaPredicted RBP11.34□□□□□ -0.59
RFC1-207ENST00000504554 ABTB2Q8N961 1025 aa11.34□□□□□ -0.59
RFC1-207ENST00000504554 GJD4Q96KN9 370 aaPredicted RBP11.34□□□□□ -0.59
RFC1-207ENST00000504554 GLI3P10071 1580 aa11.33□□□□□ -0.6
RFC1-207ENST00000504554 CD163L1Q9NR16 1453 aa11.33□□□□□ -0.6
RFC1-207ENST00000504554 KIAA0232Q92628 1395 aa11.33□□□□□ -0.6
RFC1-207ENST00000504554 ZC3H6P61129 1189 aaKnown RBP11.33□□□□□ -0.6
RFC1-207ENST00000504554 CHRNA2Q15822 529 aa11.33□□□□□ -0.6
RFC1-207ENST00000504554 CCER1Q8TC90 406 aaPredicted RBP11.33□□□□□ -0.6
RFC1-207ENST00000504554 OCEL1Q9H607 264 aa11.33□□□□□ -0.6
RFC1-207ENST00000504554 BTG4Q9NY30 223 aa11.33□□□□□ -0.6
RFC1-207ENST00000504554 CPSF1Q10570 1443 aaKnown RBP11.33□□□□□ -0.6
RFC1-207ENST00000504554 USP19O94966 1318 aa11.33□□□□□ -0.6
RFC1-207ENST00000504554 ATAD2Q6PL18 1390 aa11.32□□□□□ -0.6
RFC1-207ENST00000504554 VPS72Q15906 364 aa11.32□□□□□ -0.6
RFC1-207ENST00000504554 UPF1Q92900 1129 aaKnown RBP eCLIP11.32□□□□□ -0.6
RFC1-207ENST00000504554 SLC12A5Q9H2X9 1139 aa11.32□□□□□ -0.6
RFC1-207ENST00000504554 PLCH1Q4KWH8 1693 aa11.32□□□□□ -0.6
RFC1-207ENST00000504554 TTC21BQ7Z4L5 1316 aa11.32□□□□□ -0.6
RFC1-207ENST00000504554 PHRF1Q9P1Y6 1649 aaKnown RBP11.31□□□□□ -0.6
RFC1-207ENST00000504554 USP47Q96K76 1375 aa11.31□□□□□ -0.6
RFC1-207ENST00000504554 SLAIN1Q8ND83 568 aa11.31□□□□□ -0.6
RFC1-207ENST00000504554 PRDM11Q9NQV5 511 aa11.31□□□□□ -0.6
RFC1-207ENST00000504554 TIMELESSQ9UNS1 1208 aa11.31□□□□□ -0.6
RFC1-207ENST00000504554 NRKQ7Z2Y5 1582 aa11.31□□□□□ -0.6
RFC1-207ENST00000504554 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.31□□□□□ -0.6
RFC1-207ENST00000504554 NRAPQ86VF7 1730 aa11.3□□□□□ -0.6
RFC1-207ENST00000504554 GCP02774 474 aa11.3□□□□□ -0.6
RFC1-207ENST00000504554 PIK3C2AO00443 1686 aa11.3□□□□□ -0.6
RFC1-207ENST00000504554 BRD4O60885 1362 aaPredicted RBP11.29□□□□□ -0.6
RFC1-207ENST00000504554 RGL2O15211 777 aa11.29□□□□□ -0.6
RFC1-207ENST00000504554 NLRP6P59044 892 aa11.29□□□□□ -0.6
RFC1-207ENST00000504554 TMC1Q8TDI8 760 aa11.29□□□□□ -0.6
RFC1-207ENST00000504554 BBXQ8WY36 941 aaPredicted RBP11.29□□□□□ -0.6
RFC1-207ENST00000504554 NWD2Q9ULI1 1742 aa11.29□□□□□ -0.6
RFC1-207ENST00000504554 KTN1Q86UP2 1357 aaKnown RBP11.28□□□□□ -0.6
RFC1-207ENST00000504554 COL14A1Q05707 1796 aaKnown RBP11.28□□□□□ -0.6
RFC1-207ENST00000504554 NLRP13Q86W25 1043 aa11.28□□□□□ -0.6
RFC1-207ENST00000504554 SLIT3O75094 1523 aa11.28□□□□□ -0.6
RFC1-207ENST00000504554 A0A1W2PP64 1363 aa11.28□□□□□ -0.6
RFC1-207ENST00000504554 CPDO75976 1380 aa11.28□□□□□ -0.6
RFC1-207ENST00000504554 CAMTA1Q9Y6Y1 1673 aa11.27□□□□□ -0.6
RFC1-207ENST00000504554 AKAP12Q02952 1782 aa11.27□□□□□ -0.61
RFC1-207ENST00000504554 ONECUT3O60422 494 aaPredicted RBP11.27□□□□□ -0.61
RFC1-207ENST00000504554 NME9Q86XW9 330 aa11.27□□□□□ -0.61
RFC1-207ENST00000504554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.27□□□□□ -0.61
RFC1-207ENST00000504554 SEPT12Q8IYM1 358 aa11.27□□□□□ -0.61
RFC1-207ENST00000504554 PUS7Q96PZ0 661 aaKnown RBP11.27□□□□□ -0.61
RFC1-207ENST00000504554 PCDH10Q9P2E7 1040 aa11.27□□□□□ -0.61
RFC1-207ENST00000504554 CCDC9Q9Y3X0 531 aaKnown RBP11.27□□□□□ -0.61
RFC1-207ENST00000504554 SPATA31A5Q5VU36 1347 aa11.27□□□□□ -0.61
RFC1-207ENST00000504554 SPATA31A7Q8IWB4 1347 aa11.27□□□□□ -0.61
RFC1-207ENST00000504554 PSEN1P49768 467 aa11.26□□□□□ -0.61
RFC1-207ENST00000504554 FAM98CQ17RN3 349 aaKnown RBP11.26□□□□□ -0.61
RFC1-207ENST00000504554 PDCD7Q8N8D1 485 aaKnown RBP11.26□□□□□ -0.61
RFC1-207ENST00000504554 STRN4Q9NRL3 753 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms