RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 GOLGA6L4A6NEF3 574 aa10.45□□□□□ -0.74
CCDC149-204ENST00000504487 FGD1P98174 961 aa10.45□□□□□ -0.74
CCDC149-204ENST00000504487 TRIM6-TRIM34B2RNG4 842 aa10.44□□□□□ -0.74
CCDC149-204ENST00000504487 LETM1O95202 739 aaPredicted RBP10.44□□□□□ -0.74
CCDC149-204ENST00000504487 ZNF330Q9Y3S2 320 aaPredicted RBP10.44□□□□□ -0.74
CCDC149-204ENST00000504487 RTF1Q92541 710 aaKnown RBP10.44□□□□□ -0.74
CCDC149-204ENST00000504487 NECTIN2Q92692 538 aa10.44□□□□□ -0.74
CCDC149-204ENST00000504487 LMBRD1Q9NUN5 540 aa10.44□□□□□ -0.74
CCDC149-204ENST00000504487 ASXL1Q8IXJ9 1541 aa10.44□□□□□ -0.74
CCDC149-204ENST00000504487 ABCC2Q92887 1545 aa10.44□□□□□ -0.74
CCDC149-204ENST00000504487 DMTNQ08495 405 aa10.44□□□□□ -0.74
CCDC149-204ENST00000504487 MYRIPQ8NFW9 859 aa10.44□□□□□ -0.74
CCDC149-204ENST00000504487 GDPD2Q9HCC8 539 aa10.44□□□□□ -0.74
CCDC149-204ENST00000504487 TNNT3P45378 269 aaPredicted RBP10.43□□□□□ -0.74
CCDC149-204ENST00000504487 ZGPATQ8N5A5 531 aaKnown RBP10.43□□□□□ -0.74
CCDC149-204ENST00000504487 IFT57Q9NWB7 429 aa10.43□□□□□ -0.74
CCDC149-204ENST00000504487 CHMP3Q9Y3E7 222 aa10.43□□□□□ -0.74
CCDC149-204ENST00000504487 NOS1P29475 1434 aa10.43□□□□□ -0.74
CCDC149-204ENST00000504487 ZMYM3Q14202 1370 aa10.43□□□□□ -0.74
CCDC149-204ENST00000504487 KIF20AO95235 890 aa10.42□□□□□ -0.74
CCDC149-204ENST00000504487 PSME1Q06323 249 aa10.42□□□□□ -0.74
CCDC149-204ENST00000504487 RRS1Q15050 365 aaKnown RBP10.42□□□□□ -0.74
CCDC149-204ENST00000504487 C17orf53Q8N3J3 647 aaPredicted RBP10.42□□□□□ -0.74
CCDC149-204ENST00000504487 NLRP6P59044 892 aa10.42□□□□□ -0.74
CCDC149-204ENST00000504487 PKP1Q13835 747 aa10.42□□□□□ -0.74
CCDC149-204ENST00000504487 MAGI2Q86UL8 1455 aa10.42□□□□□ -0.74
CCDC149-204ENST00000504487 RILPL2Q969X0 211 aa10.42□□□□□ -0.74
CCDC149-204ENST00000504487 ANO2Q9NQ90 1003 aa10.42□□□□□ -0.74
CCDC149-204ENST00000504487 ADCY5O95622 1261 aa10.41□□□□□ -0.74
CCDC149-204ENST00000504487 CHAMP1Q96JM3 812 aa10.41□□□□□ -0.74
CCDC149-204ENST00000504487 TMEM63CQ9P1W3 806 aa10.41□□□□□ -0.74
CCDC149-204ENST00000504487 CCDC66A2RUB6 948 aa10.41□□□□□ -0.74
CCDC149-204ENST00000504487 TMPOP42166 694 aaKnown RBP10.41□□□□□ -0.74
CCDC149-204ENST00000504487 ESCO1Q5FWF5 840 aa10.41□□□□□ -0.74
CCDC149-204ENST00000504487 FAM184AQ8NB25 1140 aa10.41□□□□□ -0.74
CCDC149-204ENST00000504487 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.41□□□□□ -0.74
CCDC149-204ENST00000504487 ZNF428Q96B54 188 aa10.41□□□□□ -0.74
CCDC149-204ENST00000504487 ZBTB40Q9NUA8 1239 aa10.41□□□□□ -0.74
CCDC149-204ENST00000504487 DIAPH1O60610 1272 aaKnown RBP10.41□□□□□ -0.74
CCDC149-204ENST00000504487 TAF3Q5VWG9 929 aa10.41□□□□□ -0.74
CCDC149-204ENST00000504487 CARD14Q9BXL6 1004 aa10.41□□□□□ -0.74
CCDC149-204ENST00000504487 JARID2Q92833 1246 aaPredicted RBP10.4□□□□□ -0.74
CCDC149-204ENST00000504487 UTP14CQ5TAP6 766 aaKnown RBP10.4□□□□□ -0.74
CCDC149-204ENST00000504487 SLC4A10Q6U841 1118 aa10.4□□□□□ -0.74
CCDC149-204ENST00000504487 FIBPO43427 364 aa10.39□□□□□ -0.75
CCDC149-204ENST00000504487 HCLS1P14317 486 aaPredicted RBP10.39□□□□□ -0.75
CCDC149-204ENST00000504487 U2AF2P26368 475 aaKnown RBP eCLIP10.39□□□□□ -0.75
CCDC149-204ENST00000504487 CCDC27Q2M243 656 aa10.39□□□□□ -0.75
CCDC149-204ENST00000504487 NSD3Q9BZ95 1437 aa10.39□□□□□ -0.75
CCDC149-204ENST00000504487 CHD1O14646 1710 aa10.39□□□□□ -0.75
CCDC149-204ENST00000504487 NCKAP5LQ9HCH0 1330 aa10.39□□□□□ -0.75
CCDC149-204ENST00000504487 ERICH4A6NGS2 130 aa10.39□□□□□ -0.75
CCDC149-204ENST00000504487 IBTKQ9P2D0 1353 aaPredicted RBP10.39□□□□□ -0.75
CCDC149-204ENST00000504487 THEMISQ8N1K5 641 aaPredicted RBP10.39□□□□□ -0.75
CCDC149-204ENST00000504487 VGLL3A8MV65 326 aa10.38□□□□□ -0.75
CCDC149-204ENST00000504487 GPT2Q8TD30 523 aa10.38□□□□□ -0.75
CCDC149-204ENST00000504487 API5Q9BZZ5 524 aaKnown RBP10.38□□□□□ -0.75
CCDC149-204ENST00000504487 A2MP01023 1474 aa10.38□□□□□ -0.75
CCDC149-204ENST00000504487 NLRP1Q9C000 1473 aa10.38□□□□□ -0.75
CCDC149-204ENST00000504487 FAM135AQ9P2D6 1515 aa10.38□□□□□ -0.75
CCDC149-204ENST00000504487 ERC2O15083 957 aa10.38□□□□□ -0.75
CCDC149-204ENST00000504487 HMMRO75330 724 aa10.38□□□□□ -0.75
CCDC149-204ENST00000504487 KCNJ4P48050 445 aa10.38□□□□□ -0.75
CCDC149-204ENST00000504487 PROSER2Q86WR7 435 aaPredicted RBP10.38□□□□□ -0.75
CCDC149-204ENST00000504487 STAC3Q96MF2 364 aa10.38□□□□□ -0.75
CCDC149-204ENST00000504487 ABTB2Q8N961 1025 aa10.38□□□□□ -0.75
CCDC149-204ENST00000504487 CCDC9Q9Y3X0 531 aaKnown RBP10.38□□□□□ -0.75
CCDC149-204ENST00000504487 NPHP1O15259 732 aa10.37□□□□□ -0.75
CCDC149-204ENST00000504487 TPM3P06753 285 aa10.37□□□□□ -0.75
CCDC149-204ENST00000504487 PIBF1Q8WXW3 757 aa10.37□□□□□ -0.75
CCDC149-204ENST00000504487 ATP6V1DQ9Y5K8 247 aa10.37□□□□□ -0.75
CCDC149-204ENST00000504487 POLR3AO14802 1390 aaPredicted RBP10.37□□□□□ -0.75
CCDC149-204ENST00000504487 MCM2P49736 904 aa10.37□□□□□ -0.75
CCDC149-204ENST00000504487 PDLIM2Q96JY6 352 aa10.37□□□□□ -0.75
CCDC149-204ENST00000504487 BCL2L12Q9HB09 334 aa10.37□□□□□ -0.75
CCDC149-204ENST00000504487 TPD52L1Q16890 204 aaPredicted RBP10.37□□□□□ -0.75
CCDC149-204ENST00000504487 CCDC112Q8NEF3 446 aa10.37□□□□□ -0.75
CCDC149-204ENST00000504487 PLCD3Q8N3E9 789 aa10.36□□□□□ -0.75
CCDC149-204ENST00000504487 SCAF11Q99590 1463 aaKnown RBP10.36□□□□□ -0.75
CCDC149-204ENST00000504487 TRERF1Q96PN7 1200 aa10.36□□□□□ -0.75
CCDC149-204ENST00000504487 UPF3BQ9BZI7 483 aaKnown RBP10.36□□□□□ -0.75
CCDC149-204ENST00000504487 SMARCA5O60264 1052 aaPredicted RBP10.36□□□□□ -0.75
CCDC149-204ENST00000504487 NME9Q86XW9 330 aa10.36□□□□□ -0.75
CCDC149-204ENST00000504487 C16orf45Q96MC5 204 aaPredicted RBP10.36□□□□□ -0.75
CCDC149-204ENST00000504487 THUMPD2Q9BTF0 503 aaKnown RBP10.36□□□□□ -0.75
CCDC149-204ENST00000504487 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.36□□□□□ -0.75
CCDC149-204ENST00000504487 WDR33Q9C0J8 1336 aaKnown RBP10.36□□□□□ -0.75
CCDC149-204ENST00000504487 PRKAR2BP31323 418 aa10.35□□□□□ -0.75
CCDC149-204ENST00000504487 NUDT16Q96DE0 195 aaKnown RBP10.35□□□□□ -0.75
CCDC149-204ENST00000504487 TRIM5Q9C035 493 aa10.35□□□□□ -0.75
CCDC149-204ENST00000504487 NAP1L2Q9ULW6 460 aaPredicted RBP10.35□□□□□ -0.75
CCDC149-204ENST00000504487 ITSN2Q9NZM3 1697 aa10.35□□□□□ -0.75
CCDC149-204ENST00000504487 VPS37CA5D8V6 355 aaPredicted RBP10.35□□□□□ -0.75
CCDC149-204ENST00000504487 ZSCAN20P17040 1043 aaPredicted RBP10.35□□□□□ -0.75
CCDC149-204ENST00000504487 C16orf71Q8IYS4 520 aaPredicted RBP10.35□□□□□ -0.75
CCDC149-204ENST00000504487 TMX3Q96JJ7 454 aa10.35□□□□□ -0.75
CCDC149-204ENST00000504487 ADGRL2O95490 1459 aa10.35□□□□□ -0.75
CCDC149-204ENST00000504487 RIOK3O14730 519 aaKnown RBP10.35□□□□□ -0.75
CCDC149-204ENST00000504487 DDIT3P35638 169 aa10.35□□□□□ -0.75
CCDC149-204ENST00000504487 UVSSAQ2YD98 709 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms