RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 SLC24A1O60721 1099 aa17.47■□□□□ 0.39
PDGFRA-204ENST00000504461 ARHGEF25Q86VW2 580 aa17.47■□□□□ 0.39
PDGFRA-204ENST00000504461 SLC12A5Q9H2X9 1139 aa17.47■□□□□ 0.39
PDGFRA-204ENST00000504461 TERF2IPQ9NYB0 399 aa17.47■□□□□ 0.39
PDGFRA-204ENST00000504461 ST20-MTHFSA0A0A6YYL1 179 aa17.46■□□□□ 0.39
PDGFRA-204ENST00000504461 CSB-PGBD3P0DP91 1061 aa17.46■□□□□ 0.39
PDGFRA-204ENST00000504461 PUS7Q96PZ0 661 aaKnown RBP17.46■□□□□ 0.39
PDGFRA-204ENST00000504461 AXIN2Q9Y2T1 843 aa17.46■□□□□ 0.39
PDGFRA-204ENST00000504461 USP54Q70EL1 1684 aa17.45■□□□□ 0.38
PDGFRA-204ENST00000504461 WDR17Q8IZU2 1322 aa17.45■□□□□ 0.38
PDGFRA-204ENST00000504461 SBF2Q86WG5 1849 aa17.44■□□□□ 0.38
PDGFRA-204ENST00000504461 CD163L1Q9NR16 1453 aa17.44■□□□□ 0.38
PDGFRA-204ENST00000504461 APBA3O96018 575 aa17.44■□□□□ 0.38
PDGFRA-204ENST00000504461 NFAT5O94916 1531 aa17.43■□□□□ 0.38
PDGFRA-204ENST00000504461 C11orf95C9JLR9 678 aaPredicted RBP17.43■□□□□ 0.38
PDGFRA-204ENST00000504461 EZH2Q15910 746 aaKnown RBP17.43■□□□□ 0.38
PDGFRA-204ENST00000504461 NME9Q86XW9 330 aa17.43■□□□□ 0.38
PDGFRA-204ENST00000504461 DISP2A7MBM2 1401 aa17.43■□□□□ 0.38
PDGFRA-204ENST00000504461 LRRC37A3O60309 1634 aa17.43■□□□□ 0.38
PDGFRA-204ENST00000504461 USP31Q70CQ4 1352 aa17.42■□□□□ 0.38
PDGFRA-204ENST00000504461 EDC4Q6P2E9 1401 aaKnown RBP17.42■□□□□ 0.38
PDGFRA-204ENST00000504461 DDB1Q16531 1140 aa17.42■□□□□ 0.38
PDGFRA-204ENST00000504461 PSDA5PKW4 1024 aaPredicted RBP17.41■□□□□ 0.38
PDGFRA-204ENST00000504461 TESK2Q96S53 571 aa17.41■□□□□ 0.38
PDGFRA-204ENST00000504461 A0A1W2PP64 1363 aa17.4■□□□□ 0.38
PDGFRA-204ENST00000504461 CDCA7Q9BWT1 371 aaPredicted RBP17.4■□□□□ 0.38
PDGFRA-204ENST00000504461 CARD10Q9BWT7 1032 aa17.4■□□□□ 0.38
PDGFRA-204ENST00000504461 ABCC6O95255 1503 aa17.4■□□□□ 0.38
PDGFRA-204ENST00000504461 NINLQ9Y2I6 1382 aa17.4■□□□□ 0.38
PDGFRA-204ENST00000504461 CAMKK2Q96RR4 588 aa17.39■□□□□ 0.37
PDGFRA-204ENST00000504461 OVOS2A0A0G2JMS6 1433 aa17.38■□□□□ 0.37
PDGFRA-204ENST00000504461 OVOS2A0A0J9YW53 1432 aa17.38■□□□□ 0.37
PDGFRA-204ENST00000504461 OVOS2Q6IE36 1432 aa17.38■□□□□ 0.37
PDGFRA-204ENST00000504461 PEAK1Q9H792 1746 aa17.38■□□□□ 0.37
PDGFRA-204ENST00000504461 RREB1Q92766 1687 aa17.38■□□□□ 0.37
PDGFRA-204ENST00000504461 PARD3Q8TEW0 1356 aa17.38■□□□□ 0.37
PDGFRA-204ENST00000504461 TMF1P82094 1093 aa17.37■□□□□ 0.37
PDGFRA-204ENST00000504461 LRP5O75197 1615 aa17.36■□□□□ 0.37
PDGFRA-204ENST00000504461 NUP188Q5SRE5 1749 aa17.36■□□□□ 0.37
PDGFRA-204ENST00000504461 EXOC5O00471 708 aa17.36■□□□□ 0.37
PDGFRA-204ENST00000504461 R3HDM1Q15032 1099 aaKnown RBP17.36■□□□□ 0.37
PDGFRA-204ENST00000504461 USP47Q96K76 1375 aa17.36■□□□□ 0.37
PDGFRA-204ENST00000504461 CCDC7Q96M83 1385 aa17.36■□□□□ 0.37
PDGFRA-204ENST00000504461 KAT6BQ8WYB5 2073 aa17.35■□□□□ 0.37
PDGFRA-204ENST00000504461 NBPF14Q5TI25 921 aa17.34■□□□□ 0.37
PDGFRA-204ENST00000504461 NLRP2Q9NX02 1062 aa17.34■□□□□ 0.37
PDGFRA-204ENST00000504461 CDCA8Q53HL2 280 aa17.33■□□□□ 0.36
PDGFRA-204ENST00000504461 MARCH10Q8NA82 808 aaPredicted RBP17.33■□□□□ 0.36
PDGFRA-204ENST00000504461 COG3Q96JB2 828 aa17.33■□□□□ 0.36
PDGFRA-204ENST00000504461 RGPD3A6NKT7 1758 aaPredicted RBP17.33■□□□□ 0.36
PDGFRA-204ENST00000504461 RGPD4Q7Z3J3 1758 aa17.33■□□□□ 0.36
PDGFRA-204ENST00000504461 ERBB3P21860 1342 aa17.32■□□□□ 0.36
PDGFRA-204ENST00000504461 ANKRD24Q8TF21 1146 aa17.32■□□□□ 0.36
PDGFRA-204ENST00000504461 FAM208AQ9UK61 1670 aaKnown RBP17.32■□□□□ 0.36
PDGFRA-204ENST00000504461 ANKRD36BQ8N2N9 1353 aa17.31■□□□□ 0.36
PDGFRA-204ENST00000504461 KIF20BQ96Q89 1820 aa17.31■□□□□ 0.36
PDGFRA-204ENST00000504461 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
PDGFRA-204ENST00000504461 PLSCR1O15162 318 aa17.29■□□□□ 0.36
PDGFRA-204ENST00000504461 IL2RBP14784 551 aa17.29■□□□□ 0.36
PDGFRA-204ENST00000504461 IP6K1Q92551 441 aa17.29■□□□□ 0.36
PDGFRA-204ENST00000504461 RGPD2P0DJD1 1756 aa17.29■□□□□ 0.36
PDGFRA-204ENST00000504461 AMPHP49418 695 aa17.28■□□□□ 0.36
PDGFRA-204ENST00000504461 LTV1Q96GA3 475 aaPredicted RBP17.28■□□□□ 0.36
PDGFRA-204ENST00000504461 BCL9O00512 1426 aa17.27■□□□□ 0.35
PDGFRA-204ENST00000504461 TNS2Q63HR2 1409 aa17.27■□□□□ 0.35
PDGFRA-204ENST00000504461 MAP3K19Q56UN5 1328 aa17.25■□□□□ 0.35
PDGFRA-204ENST00000504461 FYB1O15117 783 aa17.25■□□□□ 0.35
PDGFRA-204ENST00000504461 ZEB1P37275 1124 aaPredicted RBP17.25■□□□□ 0.35
PDGFRA-204ENST00000504461 PTF1AQ7RTS3 328 aa17.25■□□□□ 0.35
PDGFRA-204ENST00000504461 GGNBP2Q9H3C7 697 aa17.25■□□□□ 0.35
PDGFRA-204ENST00000504461 MYOM1P52179 1685 aa17.24■□□□□ 0.35
PDGFRA-204ENST00000504461 NHSQ6T4R5 1651 aa17.24■□□□□ 0.35
PDGFRA-204ENST00000504461 FBLN1P23142 703 aa17.24■□□□□ 0.35
PDGFRA-204ENST00000504461 HOXC9P31274 260 aa17.24■□□□□ 0.35
PDGFRA-204ENST00000504461 ACSBG1Q96GR2 724 aa17.22■□□□□ 0.35
PDGFRA-204ENST00000504461 BTAF1O14981 1849 aa17.21■□□□□ 0.35
PDGFRA-204ENST00000504461 RRS1Q15050 365 aaKnown RBP17.21■□□□□ 0.35
PDGFRA-204ENST00000504461 MAP2P11137 1827 aaKnown RBP17.2■□□□□ 0.34
PDGFRA-204ENST00000504461 KCNQ2O43526 872 aa17.2■□□□□ 0.34
PDGFRA-204ENST00000504461 DDX54Q8TDD1 881 aaKnown RBP17.2■□□□□ 0.34
PDGFRA-204ENST00000504461 POLR3GLQ9BT43 218 aa17.2■□□□□ 0.34
PDGFRA-204ENST00000504461 RTL1A6NKG5 1358 aa17.19■□□□□ 0.34
PDGFRA-204ENST00000504461 TXNRD1Q16881 649 aa17.19■□□□□ 0.34
PDGFRA-204ENST00000504461 PROM2Q8N271 834 aa17.19■□□□□ 0.34
PDGFRA-204ENST00000504461 SRCAPQ6ZRS2 3230 aa17.19■□□□□ 0.34
PDGFRA-204ENST00000504461 SMG6Q86US8 1419 aaKnown RBP17.17■□□□□ 0.34
PDGFRA-204ENST00000504461 CARD14Q9BXL6 1004 aa17.17■□□□□ 0.34
PDGFRA-204ENST00000504461 NSD3Q9BZ95 1437 aa17.17■□□□□ 0.34
PDGFRA-204ENST00000504461 SPON1Q9HCB6 807 aa17.17■□□□□ 0.34
PDGFRA-204ENST00000504461 EIF4G2P78344 907 aaKnown RBP eCLIP17.16■□□□□ 0.34
PDGFRA-204ENST00000504461 STK32BQ9NY57 414 aa17.16■□□□□ 0.34
PDGFRA-204ENST00000504461 SHANK3Q9BYB0 1731 aa17.16■□□□□ 0.34
PDGFRA-204ENST00000504461 ANO8Q9HCE9 1232 aaPredicted RBP17.15■□□□□ 0.34
PDGFRA-204ENST00000504461 PPP1R1BQ9UD71 204 aaPredicted RBP17.15■□□□□ 0.34
PDGFRA-204ENST00000504461 DOT1LQ8TEK3 1739 aa17.15■□□□□ 0.34
PDGFRA-204ENST00000504461 CASZ1Q86V15 1759 aa17.15■□□□□ 0.34
PDGFRA-204ENST00000504461 NBPF6Q5VWK0 638 aa17.14■□□□□ 0.33
PDGFRA-204ENST00000504461 ZCRB1Q8TBF4 217 aaKnown RBP17.14■□□□□ 0.33
PDGFRA-204ENST00000504461 NBPF4Q96M43 638 aa17.14■□□□□ 0.33
PDGFRA-204ENST00000504461 ANKRD26Q9UPS8 1709 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms