RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 ARID3CA6NKF2 412 aa10.39□□□□□ -0.75
COPS4-203ENST00000504274 GFRA3O60609 400 aa10.39□□□□□ -0.75
COPS4-203ENST00000504274 GIGYF1O75420 1035 aaPredicted RBP10.39□□□□□ -0.75
COPS4-203ENST00000504274 ADH1CP00326 375 aa10.39□□□□□ -0.75
COPS4-203ENST00000504274 SEMA3FQ13275 785 aa10.39□□□□□ -0.75
COPS4-203ENST00000504274 GLMNQ92990 594 aa10.38□□□□□ -0.75
COPS4-203ENST00000504274 ESPNB1AK53 854 aa10.37□□□□□ -0.75
COPS4-203ENST00000504274 NR3C2P08235 984 aa10.37□□□□□ -0.75
COPS4-203ENST00000504274 FSHRP23945 695 aa10.37□□□□□ -0.75
COPS4-203ENST00000504274 SOX11P35716 441 aa10.37□□□□□ -0.75
COPS4-203ENST00000504274 MCCD1P59942 119 aaPredicted RBP10.37□□□□□ -0.75
COPS4-203ENST00000504274 CDV3Q9UKY7 258 aaKnown RBP10.37□□□□□ -0.75
COPS4-203ENST00000504274 RAB15P59190 212 aa10.36□□□□□ -0.75
COPS4-203ENST00000504274 INTS6LQ5JSJ4 861 aaKnown RBP10.36□□□□□ -0.75
COPS4-203ENST00000504274 WASF2Q9Y6W5 498 aa10.36□□□□□ -0.75
COPS4-203ENST00000504274 SUPT5HO00267 1087 aaKnown RBP10.35□□□□□ -0.75
COPS4-203ENST00000504274 PIK3CDO00329 1044 aa10.35□□□□□ -0.75
COPS4-203ENST00000504274 NBPF20Q3BBV1 942 aa10.35□□□□□ -0.75
COPS4-203ENST00000504274 C1orf115Q9H7X2 142 aa10.35□□□□□ -0.75
COPS4-203ENST00000504274 NRG2O14511 850 aaPredicted RBP10.34□□□□□ -0.75
COPS4-203ENST00000504274 NNTQ13423 1086 aa10.34□□□□□ -0.75
COPS4-203ENST00000504274 TSGA10IPQ3SY00 556 aa10.34□□□□□ -0.75
COPS4-203ENST00000504274 PHTF2Q8N3S3 785 aa10.34□□□□□ -0.75
COPS4-203ENST00000504274 HPS1Q92902 700 aa10.34□□□□□ -0.75
COPS4-203ENST00000504274 FAM187AA6NFU0 413 aa10.33□□□□□ -0.76
COPS4-203ENST00000504274 NR5A1Q13285 461 aa10.33□□□□□ -0.76
COPS4-203ENST00000504274 ZNF592Q92610 1267 aa10.33□□□□□ -0.76
COPS4-203ENST00000504274 CALR3Q96L12 384 aaKnown RBP10.33□□□□□ -0.76
COPS4-203ENST00000504274 UCN2Q96RP3 112 aa10.33□□□□□ -0.76
COPS4-203ENST00000504274 IRX2Q9BZI1 471 aaPredicted RBP10.33□□□□□ -0.76
COPS4-203ENST00000504274 CCDC85AQ96PX6 553 aaPredicted RBP10.32□□□□□ -0.76
COPS4-203ENST00000504274 ERVH48-1M5A8F1 160 aa10.31□□□□□ -0.76
COPS4-203ENST00000504274 TMPRSS4Q9NRS4 437 aa10.31□□□□□ -0.76
COPS4-203ENST00000504274 SLFNL1Q499Z3 407 aa10.3□□□□□ -0.76
COPS4-203ENST00000504274 CCDC116Q8IYX3 515 aa10.3□□□□□ -0.76
COPS4-203ENST00000504274 KLF16Q9BXK1 252 aaPredicted RBP10.3□□□□□ -0.76
COPS4-203ENST00000504274 PPP1R26Q5T8A7 1209 aaPredicted RBP10.29□□□□□ -0.76
COPS4-203ENST00000504274 RNF135Q8IUD6 432 aa10.29□□□□□ -0.76
COPS4-203ENST00000504274 SEPT12Q8IYM1 358 aa10.29□□□□□ -0.76
COPS4-203ENST00000504274 TBC1D9Q6ZT07 1266 aa10.28□□□□□ -0.76
COPS4-203ENST00000504274 CDCA7Q9BWT1 371 aaPredicted RBP10.28□□□□□ -0.76
COPS4-203ENST00000504274 CHIC2Q9UKJ5 165 aa10.28□□□□□ -0.76
COPS4-203ENST00000504274 DGAT1O75907 488 aa10.27□□□□□ -0.77
COPS4-203ENST00000504274 RNF20Q5VTR2 975 aa10.27□□□□□ -0.77
COPS4-203ENST00000504274 ITPKCQ96DU7 683 aa10.27□□□□□ -0.77
COPS4-203ENST00000504274 ZFAND3Q9H8U3 227 aa10.27□□□□□ -0.77
COPS4-203ENST00000504274 PCDHB11Q9Y5F2 797 aa10.27□□□□□ -0.77
COPS4-203ENST00000504274 SKIP12755 728 aa10.26□□□□□ -0.77
COPS4-203ENST00000504274 TIMP2P16035 220 aa10.26□□□□□ -0.77
COPS4-203ENST00000504274 WDR4P57081 412 aaKnown RBP10.26□□□□□ -0.77
COPS4-203ENST00000504274 LAPTM4AQ15012 233 aa10.26□□□□□ -0.77
COPS4-203ENST00000504274 PKDCCQ504Y2 493 aa10.26□□□□□ -0.77
COPS4-203ENST00000504274 ZNF784Q8NCA9 323 aaPredicted RBP10.26□□□□□ -0.77
COPS4-203ENST00000504274 ZIC2O95409 532 aaPredicted RBP10.25□□□□□ -0.77
COPS4-203ENST00000504274 AVPP01185 164 aa10.25□□□□□ -0.77
COPS4-203ENST00000504274 DHX9Q08211 1270 aaKnown RBP10.25□□□□□ -0.77
COPS4-203ENST00000504274 TRAF7Q6Q0C0 670 aa10.25□□□□□ -0.77
COPS4-203ENST00000504274 PLPP7Q8NBV4 271 aa10.25□□□□□ -0.77
COPS4-203ENST00000504274 TFIP11Q9UBB9 837 aaKnown RBP10.25□□□□□ -0.77
COPS4-203ENST00000504274 LILRA1O75019 489 aa10.24□□□□□ -0.77
COPS4-203ENST00000504274 SCTRP47872 440 aa10.24□□□□□ -0.77
COPS4-203ENST00000504274 PPP1R12CQ9BZL4 782 aa10.24□□□□□ -0.77
COPS4-203ENST00000504274 CYLDQ9NQC7 956 aa10.24□□□□□ -0.77
COPS4-203ENST00000504274 EMILIN1Q9Y6C2 1016 aa10.24□□□□□ -0.77
COPS4-203ENST00000504274 PALM3A6NDB9 673 aaPredicted RBP10.23□□□□□ -0.77
COPS4-203ENST00000504274 ATP9BO43861 1147 aa10.23□□□□□ -0.77
COPS4-203ENST00000504274 DEPDC4Q8N2C3 294 aa10.23□□□□□ -0.77
COPS4-203ENST00000504274 CCDC82Q8N4S0 544 aa10.23□□□□□ -0.77
COPS4-203ENST00000504274 NFATC2IPQ8NCF5 419 aa10.23□□□□□ -0.77
COPS4-203ENST00000504274 DOLKQ9UPQ8 538 aa10.23□□□□□ -0.77
COPS4-203ENST00000504274 LCE2BO14633 110 aa10.22□□□□□ -0.77
COPS4-203ENST00000504274 ADD1P35611 737 aaKnown RBP10.22□□□□□ -0.77
COPS4-203ENST00000504274 MYT1Q01538 1121 aa10.22□□□□□ -0.77
COPS4-203ENST00000504274 CBLBQ13191 982 aa10.22□□□□□ -0.77
COPS4-203ENST00000504274 PGPEP1Q9NXJ5 209 aa10.22□□□□□ -0.77
COPS4-203ENST00000504274 USP17L5A8MUK1 530 aa10.21□□□□□ -0.77
COPS4-203ENST00000504274 ST8SIA5O15466 376 aa10.21□□□□□ -0.77
COPS4-203ENST00000504274 CAPN5O15484 640 aaPredicted RBP10.21□□□□□ -0.77
COPS4-203ENST00000504274 OXLD1Q5BKU9 147 aa10.21□□□□□ -0.77
COPS4-203ENST00000504274 CFAP70Q5T0N1 1121 aa10.21□□□□□ -0.77
COPS4-203ENST00000504274 CCDC125Q86Z20 511 aa10.21□□□□□ -0.77
COPS4-203ENST00000504274 MAFBQ9Y5Q3 323 aaPredicted RBP10.21□□□□□ -0.77
COPS4-203ENST00000504274 ERVK-9P63128 1117 aa10.2□□□□□ -0.78
COPS4-203ENST00000504274 MAP7D1Q3KQU3 841 aa10.2□□□□□ -0.78
COPS4-203ENST00000504274 USP17L3A6NCW0 530 aa10.19□□□□□ -0.78
COPS4-203ENST00000504274 USP17L4A6NCW7 530 aa10.19□□□□□ -0.78
COPS4-203ENST00000504274 NCOA4Q13772 614 aa10.19□□□□□ -0.78
COPS4-203ENST00000504274 USP17L2Q6R6M4 530 aa10.19□□□□□ -0.78
COPS4-203ENST00000504274 USP17L1Q7RTZ2 530 aa10.19□□□□□ -0.78
COPS4-203ENST00000504274 SMCPP49901 116 aaPredicted RBP10.18□□□□□ -0.78
COPS4-203ENST00000504274 CC2D2BQ6DHV5 1058 aa10.18□□□□□ -0.78
COPS4-203ENST00000504274 Q6ZNB5 142 aa10.18□□□□□ -0.78
COPS4-203ENST00000504274 CCDC97Q96F63 343 aaPredicted RBP10.18□□□□□ -0.78
COPS4-203ENST00000504274 AAASQ9NRG9 546 aa10.18□□□□□ -0.78
COPS4-203ENST00000504274 DACH1Q9UI36 760 aa10.18□□□□□ -0.78
COPS4-203ENST00000504274 LMOD1P29536 600 aaPredicted RBP10.17□□□□□ -0.78
COPS4-203ENST00000504274 Q6ZVU0 165 aa10.17□□□□□ -0.78
COPS4-203ENST00000504274 PLEKHM2Q8IWE5 1019 aa10.17□□□□□ -0.78
COPS4-203ENST00000504274 CRIPAKQ8N1N5 446 aa10.17□□□□□ -0.78
COPS4-203ENST00000504274 KDF1Q8NAX2 398 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms