RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 FBXO45P0C2W1 286 aa9.31□□□□□ -0.92
TRAPPC13-205ENST00000504243 ARID5BQ14865 1188 aa9.31□□□□□ -0.92
TRAPPC13-205ENST00000504243 WASHC4Q2M389 1173 aa9.31□□□□□ -0.92
TRAPPC13-205ENST00000504243 DZIP3Q86Y13 1208 aaKnown RBP9.31□□□□□ -0.92
TRAPPC13-205ENST00000504243 CALR3Q96L12 384 aaKnown RBP9.31□□□□□ -0.92
TRAPPC13-205ENST00000504243 TLL2Q9Y6L7 1015 aa9.31□□□□□ -0.92
TRAPPC13-205ENST00000504243 J3QL48 77 aa9.3□□□□□ -0.92
TRAPPC13-205ENST00000504243 SMPD1P17405 629 aa9.3□□□□□ -0.92
TRAPPC13-205ENST00000504243 VASH1Q7L8A9 365 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC13-205ENST00000504243 SERPINA10Q9UK55 444 aa9.3□□□□□ -0.92
TRAPPC13-205ENST00000504243 ADH1CP00326 375 aa9.29□□□□□ -0.92
TRAPPC13-205ENST00000504243 NR5A1Q13285 461 aa9.29□□□□□ -0.92
TRAPPC13-205ENST00000504243 IRF5Q13568 498 aa9.29□□□□□ -0.92
TRAPPC13-205ENST00000504243 POM121CA8CG34 1229 aa9.28□□□□□ -0.92
TRAPPC13-205ENST00000504243 NBPF20Q3BBV1 942 aa9.28□□□□□ -0.92
TRAPPC13-205ENST00000504243 EIF4G2P78344 907 aaKnown RBP eCLIP9.27□□□□□ -0.93
TRAPPC13-205ENST00000504243 VAC14Q08AM6 782 aa9.27□□□□□ -0.93
TRAPPC13-205ENST00000504243 Q6ZNB5 142 aa9.27□□□□□ -0.93
TRAPPC13-205ENST00000504243 AVPP01185 164 aa9.26□□□□□ -0.93
TRAPPC13-205ENST00000504243 GLMNQ92990 594 aa9.26□□□□□ -0.93
TRAPPC13-205ENST00000504243 KCTD15Q96SI1 283 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC13-205ENST00000504243 PCDHB9Q9Y5E1 797 aa9.26□□□□□ -0.93
TRAPPC13-205ENST00000504243 GRM5P41594 1212 aa9.25□□□□□ -0.93
TRAPPC13-205ENST00000504243 NNTQ13423 1086 aa9.25□□□□□ -0.93
TRAPPC13-205ENST00000504243 SOX11P35716 441 aa9.24□□□□□ -0.93
TRAPPC13-205ENST00000504243 CTC1Q2NKJ3 1217 aa9.24□□□□□ -0.93
TRAPPC13-205ENST00000504243 HDGFL1Q5TGJ6 251 aa9.24□□□□□ -0.93
TRAPPC13-205ENST00000504243 FSHRP23945 695 aa9.23□□□□□ -0.93
TRAPPC13-205ENST00000504243 CCDC125Q86Z20 511 aa9.23□□□□□ -0.93
TRAPPC13-205ENST00000504243 SMCPP49901 116 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC13-205ENST00000504243 DHX9Q08211 1270 aaKnown RBP9.22□□□□□ -0.93
TRAPPC13-205ENST00000504243 SEPT12Q8IYM1 358 aa9.22□□□□□ -0.93
TRAPPC13-205ENST00000504243 HPS1Q92902 700 aa9.22□□□□□ -0.93
TRAPPC13-205ENST00000504243 TRIM52Q96A61 297 aa9.22□□□□□ -0.93
TRAPPC13-205ENST00000504243 RNF20Q5VTR2 975 aa9.21□□□□□ -0.94
TRAPPC13-205ENST00000504243 CCDC116Q8IYX3 515 aa9.21□□□□□ -0.94
TRAPPC13-205ENST00000504243 CRIPAKQ8N1N5 446 aa9.21□□□□□ -0.94
TRAPPC13-205ENST00000504243 ESPNB1AK53 854 aa9.2□□□□□ -0.94
TRAPPC13-205ENST00000504243 MYT1Q01538 1121 aa9.2□□□□□ -0.94
TRAPPC13-205ENST00000504243 SEMA3FQ13275 785 aa9.2□□□□□ -0.94
TRAPPC13-205ENST00000504243 TRAF7Q6Q0C0 670 aa9.2□□□□□ -0.94
TRAPPC13-205ENST00000504243 EMILIN1Q9Y6C2 1016 aa9.2□□□□□ -0.94
TRAPPC13-205ENST00000504243 AXIN1O15169 862 aa9.19□□□□□ -0.94
TRAPPC13-205ENST00000504243 NR3C2P08235 984 aa9.19□□□□□ -0.94
TRAPPC13-205ENST00000504243 INTS6LQ5JSJ4 861 aaKnown RBP9.19□□□□□ -0.94
TRAPPC13-205ENST00000504243 GIGYF1O75420 1035 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC13-205ENST00000504243 WDR4P57081 412 aaKnown RBP9.18□□□□□ -0.94
TRAPPC13-205ENST00000504243 PGPEP1Q9NXJ5 209 aa9.18□□□□□ -0.94
TRAPPC13-205ENST00000504243 CEP126Q9P2H0 1117 aa9.18□□□□□ -0.94
TRAPPC13-205ENST00000504243 CAPN5O15484 640 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC13-205ENST00000504243 ZIC2O95409 532 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC13-205ENST00000504243 TIMP2P16035 220 aa9.16□□□□□ -0.94
TRAPPC13-205ENST00000504243 RFX1P22670 979 aa9.16□□□□□ -0.94
TRAPPC13-205ENST00000504243 PPP1R26Q5T8A7 1209 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC13-205ENST00000504243 KLF16Q9BXK1 252 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC13-205ENST00000504243 AAASQ9NRG9 546 aa9.16□□□□□ -0.94
TRAPPC13-205ENST00000504243 RAB15P59190 212 aa9.15□□□□□ -0.94
TRAPPC13-205ENST00000504243 SLFNL1Q499Z3 407 aa9.15□□□□□ -0.94
TRAPPC13-205ENST00000504243 ADAMTS19Q8TE59 1207 aa9.15□□□□□ -0.94
TRAPPC13-205ENST00000504243 ERVH48-1M5A8F1 160 aa9.14□□□□□ -0.95
TRAPPC13-205ENST00000504243 ITPKCQ96DU7 683 aa9.14□□□□□ -0.95
TRAPPC13-205ENST00000504243 ALG2Q9H553 416 aa9.14□□□□□ -0.95
TRAPPC13-205ENST00000504243 ACIN1Q9UKV3 1341 aaKnown RBP9.12□□□□□ -0.95
TRAPPC13-205ENST00000504243 ST8SIA5O15466 376 aa9.12□□□□□ -0.95
TRAPPC13-205ENST00000504243 ZFAND3Q9H8U3 227 aa9.12□□□□□ -0.95
TRAPPC13-205ENST00000504243 PDIA4P13667 645 aaKnown RBP9.11□□□□□ -0.95
TRAPPC13-205ENST00000504243 RNF135Q8IUD6 432 aa9.11□□□□□ -0.95
TRAPPC13-205ENST00000504243 PHTF2Q8N3S3 785 aa9.11□□□□□ -0.95
TRAPPC13-205ENST00000504243 LCE2BO14633 110 aa9.1□□□□□ -0.95
TRAPPC13-205ENST00000504243 PPP1R12CQ9BZL4 782 aa9.1□□□□□ -0.95
TRAPPC13-205ENST00000504243 TMPRSS4Q9NRS4 437 aa9.1□□□□□ -0.95
TRAPPC13-205ENST00000504243 TFIP11Q9UBB9 837 aaKnown RBP9.1□□□□□ -0.95
TRAPPC13-205ENST00000504243 PCDHB11Q9Y5F2 797 aa9.1□□□□□ -0.95
TRAPPC13-205ENST00000504243 LMOD1P29536 600 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC13-205ENST00000504243 ZNF784Q8NCA9 323 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC13-205ENST00000504243 ESF1Q9H501 851 aaKnown RBP9.09□□□□□ -0.95
TRAPPC13-205ENST00000504243 PALM3A6NDB9 673 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC13-205ENST00000504243 UPP2O95045 317 aa9.08□□□□□ -0.96
TRAPPC13-205ENST00000504243 SCARF1Q14162 830 aa9.08□□□□□ -0.96
TRAPPC13-205ENST00000504243 MAP7D1Q3KQU3 841 aa9.08□□□□□ -0.96
TRAPPC13-205ENST00000504243 Q6ZVU0 165 aa9.08□□□□□ -0.96
TRAPPC13-205ENST00000504243 ATP13A2Q9NQ11 1180 aa9.08□□□□□ -0.96
TRAPPC13-205ENST00000504243 PPP1R15AO75807 674 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC13-205ENST00000504243 CC2D2BQ6DHV5 1058 aa9.07□□□□□ -0.96
TRAPPC13-205ENST00000504243 MRPL14Q6P1L8 145 aaKnown RBP9.07□□□□□ -0.96
TRAPPC13-205ENST00000504243 MEIOBQ8N635 442 aa9.07□□□□□ -0.96
TRAPPC13-205ENST00000504243 NFATC2IPQ8NCF5 419 aa9.07□□□□□ -0.96
TRAPPC13-205ENST00000504243 CCDC85AQ96PX6 553 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC13-205ENST00000504243 CYLDQ9NQC7 956 aa9.07□□□□□ -0.96
TRAPPC13-205ENST00000504243 CHIC2Q9UKJ5 165 aa9.07□□□□□ -0.96
TRAPPC13-205ENST00000504243 DOLKQ9UPQ8 538 aa9.07□□□□□ -0.96
TRAPPC13-205ENST00000504243 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC13-205ENST00000504243 LILRA1O75019 489 aa9.06□□□□□ -0.96
TRAPPC13-205ENST00000504243 ERVK-9P63128 1117 aa9.06□□□□□ -0.96
TRAPPC13-205ENST00000504243 SIRT1Q96EB6 747 aa9.06□□□□□ -0.96
TRAPPC13-205ENST00000504243 TSEN34Q9BSV6 310 aaKnown RBP9.06□□□□□ -0.96
TRAPPC13-205ENST00000504243 SENP2Q9HC62 589 aa9.06□□□□□ -0.96
TRAPPC13-205ENST00000504243 DACH1Q9UI36 760 aa9.06□□□□□ -0.96
TRAPPC13-205ENST00000504243 LZTS3O60299 673 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC13-205ENST00000504243 MYCP01106 439 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms