RNA–Protein interactions for RNA: ENST00000504091.1

SH3TC2-204, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 4,522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-204ENST00000504091 GTF2E1P29083 439 aaPredicted RBP8.45□□□□□ -1.06
SH3TC2-204ENST00000504091 HS6ST3Q8IZP7 471 aa8.45□□□□□ -1.06
SH3TC2-204ENST00000504091 SIGLEC1Q9BZZ2 1709 aa8.45□□□□□ -1.06
SH3TC2-204ENST00000504091 ZNF644Q9H582 1327 aaPredicted RBP8.45□□□□□ -1.06
SH3TC2-204ENST00000504091 SF3B2Q13435 895 aaKnown RBP8.44□□□□□ -1.06
SH3TC2-204ENST00000504091 ZNF518AQ6AHZ1 1483 aa8.44□□□□□ -1.06
SH3TC2-204ENST00000504091 MED1Q15648 1581 aaPredicted RBP8.44□□□□□ -1.06
SH3TC2-204ENST00000504091 DIP2CQ9Y2E4 1556 aa8.44□□□□□ -1.06
SH3TC2-204ENST00000504091 KIAA1107Q9UPP5 1409 aa8.44□□□□□ -1.06
SH3TC2-204ENST00000504091 STK25O00506 426 aa8.44□□□□□ -1.06
SH3TC2-204ENST00000504091 ZSCAN20P17040 1043 aaPredicted RBP8.44□□□□□ -1.06
SH3TC2-204ENST00000504091 RBM27Q9P2N5 1060 aaKnown RBP8.44□□□□□ -1.06
SH3TC2-204ENST00000504091 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.44□□□□□ -1.06
SH3TC2-204ENST00000504091 FBXW7Q969H0 707 aa8.44□□□□□ -1.06
SH3TC2-204ENST00000504091 ZNF445P59923 1031 aa8.44□□□□□ -1.06
SH3TC2-204ENST00000504091 NOLC1Q14978 699 aaKnown RBP eCLIP8.44□□□□□ -1.06
SH3TC2-204ENST00000504091 TCOF1Q13428 1488 aaKnown RBP8.43□□□□□ -1.06
SH3TC2-204ENST00000504091 MVPQ14764 893 aaKnown RBP8.43□□□□□ -1.06
SH3TC2-204ENST00000504091 ERICH4A6NGS2 130 aa8.43□□□□□ -1.06
SH3TC2-204ENST00000504091 PER1O15534 1290 aaPredicted RBP8.43□□□□□ -1.06
SH3TC2-204ENST00000504091 FAM177A1Q8N128 213 aaPredicted RBP8.43□□□□□ -1.06
SH3TC2-204ENST00000504091 DNAJC2Q99543 621 aaKnown RBP8.43□□□□□ -1.06
SH3TC2-204ENST00000504091 KIF14Q15058 1648 aa8.43□□□□□ -1.06
SH3TC2-204ENST00000504091 PLCH2O75038 1416 aa8.43□□□□□ -1.06
SH3TC2-204ENST00000504091 RARSP54136 660 aaKnown RBP8.42□□□□□ -1.06
SH3TC2-204ENST00000504091 LRSAM1Q6UWE0 723 aa8.42□□□□□ -1.06
SH3TC2-204ENST00000504091 TIGD1Q96MW7 591 aa8.42□□□□□ -1.06
SH3TC2-204ENST00000504091 ZNF830Q96NB3 372 aaPredicted RBP8.42□□□□□ -1.06
SH3TC2-204ENST00000504091 RABEP1Q15276 862 aa8.42□□□□□ -1.06
SH3TC2-204ENST00000504091 FAM117AQ9C073 453 aa8.42□□□□□ -1.06
SH3TC2-204ENST00000504091 BLMP54132 1417 aaPredicted RBP8.42□□□□□ -1.06
SH3TC2-204ENST00000504091 U2SURPO15042 1029 aaKnown RBP8.42□□□□□ -1.06
SH3TC2-204ENST00000504091 MORC1Q86VD1 984 aa8.42□□□□□ -1.06
SH3TC2-204ENST00000504091 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.42□□□□□ -1.06
SH3TC2-204ENST00000504091 TRAPPC8Q9Y2L5 1435 aa8.42□□□□□ -1.06
SH3TC2-204ENST00000504091 RETREG2Q8NC44 543 aa8.42□□□□□ -1.06
SH3TC2-204ENST00000504091 ZNF592Q92610 1267 aa8.42□□□□□ -1.06
SH3TC2-204ENST00000504091 SPINK5Q9NQ38 1064 aaPredicted RBP8.42□□□□□ -1.06
SH3TC2-204ENST00000504091 MYO3AQ8NEV4 1616 aa8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 SUPT6HQ7KZ85 1726 aaKnown RBP8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 ZNF692Q9BU19 519 aaPredicted RBP8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 CALCOCO1Q9P1Z2 691 aa8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 EHBP1L1Q8N3D4 1523 aa8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 U2AF2P26368 475 aaKnown RBP eCLIP8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 CADPS2Q86UW7 1296 aa8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 PLXNC1O60486 1568 aa8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 IRX3P78415 501 aaPredicted RBP8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 WWC1Q8IX03 1113 aa8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 GAS2L2Q8NHY3 880 aa8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 INSRP06213 1382 aa8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 RNF17Q9BXT8 1623 aaKnown RBP8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 PREX2Q70Z35 1606 aa8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 NOL8Q76FK4 1167 aaKnown RBP8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 TRERF1Q96PN7 1200 aa8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 FEZ1Q99689 392 aa8.41□□□□□ -1.06
SH3TC2-204ENST00000504091 KDM5AP29375 1690 aaKnown RBP8.4□□□□□ -1.06
SH3TC2-204ENST00000504091 IFT57Q9NWB7 429 aa8.4□□□□□ -1.06
SH3TC2-204ENST00000504091 U2AF1L5P0DN76 240 aaPredicted RBP8.4□□□□□ -1.06
SH3TC2-204ENST00000504091 U2AF1Q01081 240 aaKnown RBP eCLIP8.4□□□□□ -1.06
SH3TC2-204ENST00000504091 USP25Q9UHP3 1055 aa8.4□□□□□ -1.06
SH3TC2-204ENST00000504091 NUP153P49790 1475 aaKnown RBP8.4□□□□□ -1.07
SH3TC2-204ENST00000504091 ADGBQ8N7X0 1667 aa8.4□□□□□ -1.07
SH3TC2-204ENST00000504091 CDC45O75419 566 aa8.4□□□□□ -1.07
SH3TC2-204ENST00000504091 TPM3P06753 285 aa8.4□□□□□ -1.07
SH3TC2-204ENST00000504091 FAM184AQ8NB25 1140 aa8.4□□□□□ -1.07
SH3TC2-204ENST00000504091 RBM42Q9BTD8 480 aaKnown RBP8.4□□□□□ -1.07
SH3TC2-204ENST00000504091 TTC12Q9H892 705 aaPredicted RBP8.4□□□□□ -1.07
SH3TC2-204ENST00000504091 ROCK1Q13464 1354 aa8.39□□□□□ -1.07
SH3TC2-204ENST00000504091 APPP05067 770 aa8.39□□□□□ -1.07
SH3TC2-204ENST00000504091 RLBP1P12271 317 aa8.39□□□□□ -1.07
SH3TC2-204ENST00000504091 TSPYL1Q9H0U9 437 aa8.39□□□□□ -1.07
SH3TC2-204ENST00000504091 OGFRQ9NZT2 677 aa8.39□□□□□ -1.07
SH3TC2-204ENST00000504091 TCP11L2Q8N4U5 519 aa8.39□□□□□ -1.07
SH3TC2-204ENST00000504091 SPC24Q8NBT2 197 aa8.39□□□□□ -1.07
SH3TC2-204ENST00000504091 RUNDC1Q96C34 613 aa8.39□□□□□ -1.07
SH3TC2-204ENST00000504091 BCL2L12Q9HB09 334 aa8.39□□□□□ -1.07
SH3TC2-204ENST00000504091 A0A0G2JS52 829 aa8.39□□□□□ -1.07
SH3TC2-204ENST00000504091 HTATSF1O43719 755 aaKnown RBP8.39□□□□□ -1.07
SH3TC2-204ENST00000504091 CHD1LQ86WJ1 897 aa8.39□□□□□ -1.07
SH3TC2-204ENST00000504091 IBTKQ9P2D0 1353 aaPredicted RBP8.38□□□□□ -1.07
SH3TC2-204ENST00000504091 MCCP23508 829 aa8.38□□□□□ -1.07
SH3TC2-204ENST00000504091 TNNQ9UQP3 1299 aa8.38□□□□□ -1.07
SH3TC2-204ENST00000504091 DAPK1P53355 1430 aa8.38□□□□□ -1.07
SH3TC2-204ENST00000504091 ATP2B3Q16720 1220 aa8.38□□□□□ -1.07
SH3TC2-204ENST00000504091 CCDC112Q8NEF3 446 aa8.38□□□□□ -1.07
SH3TC2-204ENST00000504091 PIBF1Q8WXW3 757 aa8.38□□□□□ -1.07
SH3TC2-204ENST00000504091 RALGAPBQ86X10 1494 aa8.38□□□□□ -1.07
SH3TC2-204ENST00000504091 CCDC144AA2RUR9 1427 aa8.38□□□□□ -1.07
SH3TC2-204ENST00000504091 TEX35Q5T0J7 233 aa8.37□□□□□ -1.07
SH3TC2-204ENST00000504091 ZMYM3Q14202 1370 aa8.37□□□□□ -1.07
SH3TC2-204ENST00000504091 MED14O60244 1454 aa8.37□□□□□ -1.07
SH3TC2-204ENST00000504091 ZC3H13Q5T200 1668 aaKnown RBP8.37□□□□□ -1.07
SH3TC2-204ENST00000504091 ADCY5O95622 1261 aa8.37□□□□□ -1.07
SH3TC2-204ENST00000504091 HMGB1P09429 215 aaKnown RBP8.37□□□□□ -1.07
SH3TC2-204ENST00000504091 PUS7Q96PZ0 661 aaKnown RBP8.37□□□□□ -1.07
SH3TC2-204ENST00000504091 GABPB1Q06547 395 aaPredicted RBP8.37□□□□□ -1.07
SH3TC2-204ENST00000504091 JARID2Q92833 1246 aaPredicted RBP8.37□□□□□ -1.07
SH3TC2-204ENST00000504091 LMBRD1Q9NUN5 540 aa8.37□□□□□ -1.07
SH3TC2-204ENST00000504091 ABCA6Q8N139 1617 aa8.37□□□□□ -1.07
SH3TC2-204ENST00000504091 ABCC1P33527 1531 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms