RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 GSK3AP49840 483 aa7.92□□□□□ -1.14
SMN2-204ENST00000503678 HLA-CQ95604 372 aa7.92□□□□□ -1.14
SMN2-204ENST00000503678 VSIG8P0DPA2 414 aa7.91□□□□□ -1.14
SMN2-204ENST00000503678 EHBP1Q8NDI1 1231 aa7.91□□□□□ -1.14
SMN2-204ENST00000503678 HELBQ8NG08 1087 aaPredicted RBP7.91□□□□□ -1.14
SMN2-204ENST00000503678 PBXIP1Q96AQ6 731 aa7.91□□□□□ -1.14
SMN2-204ENST00000503678 IRF5Q13568 498 aa7.9□□□□□ -1.14
SMN2-204ENST00000503678 MTMR2Q13614 643 aa7.9□□□□□ -1.14
SMN2-204ENST00000503678 PCDHGC3Q9UN70 934 aa7.9□□□□□ -1.14
SMN2-204ENST00000503678 PATL2C9JE40 543 aaKnown RBP7.89□□□□□ -1.15
SMN2-204ENST00000503678 GUCA2AQ02747 115 aa7.89□□□□□ -1.15
SMN2-204ENST00000503678 HDGFL1Q5TGJ6 251 aa7.89□□□□□ -1.15
SMN2-204ENST00000503678 TMEM151AQ8N4L1 468 aa7.89□□□□□ -1.15
SMN2-204ENST00000503678 CTDSPL2Q05D32 466 aa7.88□□□□□ -1.15
SMN2-204ENST00000503678 TRIM34Q9BYJ4 488 aa7.88□□□□□ -1.15
SMN2-204ENST00000503678 PTCRAQ6ISU1 281 aaPredicted RBP7.87□□□□□ -1.15
SMN2-204ENST00000503678 ADAMTS19Q8TE59 1207 aa7.87□□□□□ -1.15
SMN2-204ENST00000503678 SYMPKQ92797 1274 aaKnown RBP7.87□□□□□ -1.15
SMN2-204ENST00000503678 HMX1Q9NP08 348 aaPredicted RBP7.87□□□□□ -1.15
SMN2-204ENST00000503678 USTQ9Y2C2 406 aa7.87□□□□□ -1.15
SMN2-204ENST00000503678 C6orf229H3BNL8 230 aa7.86□□□□□ -1.15
SMN2-204ENST00000503678 GPR37L1O60883 481 aa7.86□□□□□ -1.15
SMN2-204ENST00000503678 JUNDP17535 347 aa7.86□□□□□ -1.15
SMN2-204ENST00000503678 GDF11O95390 407 aa7.85□□□□□ -1.15
SMN2-204ENST00000503678 SOX11P35716 441 aa7.85□□□□□ -1.15
SMN2-204ENST00000503678 SCARF1Q14162 830 aa7.85□□□□□ -1.15
SMN2-204ENST00000503678 TMCO4Q5TGY1 634 aa7.85□□□□□ -1.15
SMN2-204ENST00000503678 MRPL14Q6P1L8 145 aaKnown RBP7.85□□□□□ -1.15
SMN2-204ENST00000503678 RETREG3Q86VR2 466 aa7.85□□□□□ -1.15
SMN2-204ENST00000503678 PPP1R12CQ9BZL4 782 aa7.85□□□□□ -1.15
SMN2-204ENST00000503678 RASSF7Q02833 373 aa7.84□□□□□ -1.15
SMN2-204ENST00000503678 CFAP70Q5T0N1 1121 aa7.84□□□□□ -1.15
SMN2-204ENST00000503678 ALG2Q9H553 416 aa7.84□□□□□ -1.15
SMN2-204ENST00000503678 CFAP99D6REC4 459 aa7.83□□□□□ -1.16
SMN2-204ENST00000503678 CSB-PGBD3P0DP91 1061 aa7.83□□□□□ -1.16
SMN2-204ENST00000503678 SH3BP2P78314 561 aa7.83□□□□□ -1.16
SMN2-204ENST00000503678 MPNDQ8N594 471 aa7.83□□□□□ -1.16
SMN2-204ENST00000503678 LRRN4Q8WUT4 740 aa7.83□□□□□ -1.16
SMN2-204ENST00000503678 TSC1Q92574 1164 aa7.83□□□□□ -1.16
SMN2-204ENST00000503678 NUDT12Q9BQG2 462 aa7.83□□□□□ -1.16
SMN2-204ENST00000503678 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.82□□□□□ -1.16
SMN2-204ENST00000503678 BRD1O95696 1058 aa7.82□□□□□ -1.16
SMN2-204ENST00000503678 SRPK2P78362 688 aaKnown RBP7.82□□□□□ -1.16
SMN2-204ENST00000503678 VAC14Q08AM6 782 aa7.82□□□□□ -1.16
SMN2-204ENST00000503678 GZF1Q9H116 711 aaPredicted RBP7.82□□□□□ -1.16
SMN2-204ENST00000503678 RFX1P22670 979 aa7.81□□□□□ -1.16
SMN2-204ENST00000503678 KCNA1Q09470 495 aa7.81□□□□□ -1.16
SMN2-204ENST00000503678 PURBQ96QR8 312 aaKnown RBP7.81□□□□□ -1.16
SMN2-204ENST00000503678 PALM3A6NDB9 673 aaPredicted RBP7.8□□□□□ -1.16
SMN2-204ENST00000503678 SOBPA7XYQ1 873 aa7.8□□□□□ -1.16
SMN2-204ENST00000503678 PNMA1Q8ND90 353 aa7.8□□□□□ -1.16
SMN2-204ENST00000503678 RNF225M0QZC1 329 aaPredicted RBP7.79□□□□□ -1.16
SMN2-204ENST00000503678 CCNYL3P0C7X3 344 aa7.78□□□□□ -1.16
SMN2-204ENST00000503678 TIMP2P16035 220 aa7.78□□□□□ -1.16
SMN2-204ENST00000503678 VARSP26640 1264 aaKnown RBP7.78□□□□□ -1.16
SMN2-204ENST00000503678 MFAP1P55081 439 aaKnown RBP7.78□□□□□ -1.16
SMN2-204ENST00000503678 NNTQ13423 1086 aa7.78□□□□□ -1.16
SMN2-204ENST00000503678 DESI1Q6ICB0 168 aa7.78□□□□□ -1.16
SMN2-204ENST00000503678 RGS22Q8NE09 1264 aa7.78□□□□□ -1.16
SMN2-204ENST00000503678 PRR7Q8TB68 274 aa7.78□□□□□ -1.16
SMN2-204ENST00000503678 EPS8L1Q8TE68 723 aa7.78□□□□□ -1.16
SMN2-204ENST00000503678 KLF16Q9BXK1 252 aaPredicted RBP7.78□□□□□ -1.16
SMN2-204ENST00000503678 ADAMTS8Q9UP79 889 aa7.78□□□□□ -1.16
SMN2-204ENST00000503678 PPFIA3O75145 1194 aa7.77□□□□□ -1.17
SMN2-204ENST00000503678 LMOD1P29536 600 aaPredicted RBP7.77□□□□□ -1.17
SMN2-204ENST00000503678 WDR4P57081 412 aaKnown RBP7.77□□□□□ -1.17
SMN2-204ENST00000503678 SEMA3FQ13275 785 aa7.77□□□□□ -1.17
SMN2-204ENST00000503678 NR6A1Q15406 480 aa7.77□□□□□ -1.17
SMN2-204ENST00000503678 UCN2Q96RP3 112 aa7.77□□□□□ -1.17
SMN2-204ENST00000503678 ATG7O95352 703 aa7.76□□□□□ -1.17
SMN2-204ENST00000503678 ADH1CP00326 375 aa7.76□□□□□ -1.17
SMN2-204ENST00000503678 EIF4G2P78344 907 aaKnown RBP eCLIP7.76□□□□□ -1.17
SMN2-204ENST00000503678 PTPRNQ16849 979 aa7.76□□□□□ -1.17
SMN2-204ENST00000503678 EVA1BQ9NVM1 165 aa7.76□□□□□ -1.17
SMN2-204ENST00000503678 TFIP11Q9UBB9 837 aaKnown RBP7.76□□□□□ -1.17
SMN2-204ENST00000503678 TLL2Q9Y6L7 1015 aa7.76□□□□□ -1.17
SMN2-204ENST00000503678 MAN1A2O60476 641 aa7.75□□□□□ -1.17
SMN2-204ENST00000503678 IGHA1P01876 353 aa7.75□□□□□ -1.17
SMN2-204ENST00000503678 BAP1Q92560 729 aa7.75□□□□□ -1.17
SMN2-204ENST00000503678 MAFBQ9Y5Q3 323 aaPredicted RBP7.75□□□□□ -1.17
SMN2-204ENST00000503678 MTMR7Q9Y216 660 aa7.74□□□□□ -1.17
SMN2-204ENST00000503678 PER1O15534 1290 aaPredicted RBP7.73□□□□□ -1.17
SMN2-204ENST00000503678 KCNH2Q12809 1159 aa7.73□□□□□ -1.17
SMN2-204ENST00000503678 UNC93B1Q9H1C4 597 aa7.73□□□□□ -1.17
SMN2-204ENST00000503678 ATP9BO43861 1147 aa7.72□□□□□ -1.17
SMN2-204ENST00000503678 NR1H3Q13133 447 aa7.72□□□□□ -1.17
SMN2-204ENST00000503678 LINC01559Q495D7 138 aa7.72□□□□□ -1.17
SMN2-204ENST00000503678 LYPD8Q6UX82 237 aa7.72□□□□□ -1.17
SMN2-204ENST00000503678 ZNF511Q8NB15 262 aa7.72□□□□□ -1.17
SMN2-204ENST00000503678 CTHP32929 405 aa7.71□□□□□ -1.18
SMN2-204ENST00000503678 TBC1D9Q6ZT07 1266 aa7.71□□□□□ -1.18
SMN2-204ENST00000503678 VRTNQ9H8Y1 702 aa7.71□□□□□ -1.18
SMN2-204ENST00000503678 DNMT3AQ9Y6K1 912 aaPredicted RBP7.71□□□□□ -1.18
SMN2-204ENST00000503678 TMEM88BA6NKF7 163 aa7.7□□□□□ -1.18
SMN2-204ENST00000503678 KRT76Q01546 638 aa7.7□□□□□ -1.18
SMN2-204ENST00000503678 B4GALNT3Q6L9W6 998 aa7.7□□□□□ -1.18
SMN2-204ENST00000503678 GPAT2Q6NUI2 795 aa7.7□□□□□ -1.18
SMN2-204ENST00000503678 GPR161Q8N6U8 529 aaKnown RBP7.7□□□□□ -1.18
SMN2-204ENST00000503678 NFATC2IPQ8NCF5 419 aa7.7□□□□□ -1.18
SMN2-204ENST00000503678 CNTNAP3BQ96NU0 1288 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms