RNA–Protein interactions for RNA: ENST00000502730.5

TNFRSF25-217, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-217ENST00000502730 USP47Q96K76 1375 aa32.09■■■□□ 2.73
TNFRSF25-217ENST00000502730 KCNH5Q8NCM2 988 aa32.09■■■□□ 2.73
TNFRSF25-217ENST00000502730 EDC4Q6P2E9 1401 aaKnown RBP32.09■■■□□ 2.73
TNFRSF25-217ENST00000502730 HDGFL2Q7Z4V5 671 aaPredicted RBP32.07■■■□□ 2.72
TNFRSF25-217ENST00000502730 PUS7Q96PZ0 661 aaKnown RBP32.06■■■□□ 2.72
TNFRSF25-217ENST00000502730 THRAP3Q9Y2W1 955 aaKnown RBP32.05■■■□□ 2.72
TNFRSF25-217ENST00000502730 PEAK1Q9H792 1746 aa32.05■■■□□ 2.72
TNFRSF25-217ENST00000502730 WDR17Q8IZU2 1322 aa32.04■■■□□ 2.72
TNFRSF25-217ENST00000502730 BAG6P46379 1132 aa32.03■■■□□ 2.72
TNFRSF25-217ENST00000502730 TOM1L2Q6ZVM7 507 aa32.03■■■□□ 2.72
TNFRSF25-217ENST00000502730 ABCC6O95255 1503 aa32.03■■■□□ 2.72
TNFRSF25-217ENST00000502730 OVOS2A0A0J9YW53 1432 aa32.02■■■□□ 2.72
TNFRSF25-217ENST00000502730 OVOS2Q6IE36 1432 aa32.02■■■□□ 2.72
TNFRSF25-217ENST00000502730 TRIM37O94972 964 aa32.02■■■□□ 2.72
TNFRSF25-217ENST00000502730 EN1Q05925 392 aaPredicted RBP32.02■■■□□ 2.72
TNFRSF25-217ENST00000502730 PDE3BQ13370 1112 aa32.02■■■□□ 2.72
TNFRSF25-217ENST00000502730 TERF2IPQ9NYB0 399 aa32.02■■■□□ 2.72
TNFRSF25-217ENST00000502730 SBF2Q86WG5 1849 aa32.01■■■□□ 2.72
TNFRSF25-217ENST00000502730 FAM196AQ6ZSG2 479 aa32■■■□□ 2.71
TNFRSF25-217ENST00000502730 DISP2A7MBM2 1401 aa32■■■□□ 2.71
TNFRSF25-217ENST00000502730 NINLQ9Y2I6 1382 aa31.98■■■□□ 2.71
TNFRSF25-217ENST00000502730 MYOM1P52179 1685 aa31.98■■■□□ 2.71
TNFRSF25-217ENST00000502730 CLSPNQ9HAW4 1339 aa31.96■■■□□ 2.71
TNFRSF25-217ENST00000502730 RREB1Q92766 1687 aa31.95■■■□□ 2.71
TNFRSF25-217ENST00000502730 CSB-PGBD3P0DP91 1061 aa31.94■■■□□ 2.7
TNFRSF25-217ENST00000502730 SRCAPQ6ZRS2 3230 aa31.94■■■□□ 2.7
TNFRSF25-217ENST00000502730 EZH2Q15910 746 aaKnown RBP31.93■■■□□ 2.7
TNFRSF25-217ENST00000502730 TMF1P82094 1093 aa31.92■■■□□ 2.7
TNFRSF25-217ENST00000502730 ANKRD36BQ8N2N9 1353 aa31.92■■■□□ 2.7
TNFRSF25-217ENST00000502730 NUP188Q5SRE5 1749 aa31.92■■■□□ 2.7
TNFRSF25-217ENST00000502730 CARD10Q9BWT7 1032 aa31.91■■■□□ 2.7
TNFRSF25-217ENST00000502730 KIF20BQ96Q89 1820 aa31.91■■■□□ 2.7
TNFRSF25-217ENST00000502730 PSDA5PKW4 1024 aaPredicted RBP31.9■■■□□ 2.7
TNFRSF25-217ENST00000502730 TIMELESSQ9UNS1 1208 aa31.9■■■□□ 2.7
TNFRSF25-217ENST00000502730 DDB1Q16531 1140 aa31.89■■■□□ 2.7
TNFRSF25-217ENST00000502730 OVOS2A0A0G2JMS6 1433 aa31.89■■■□□ 2.7
TNFRSF25-217ENST00000502730 APBA3O96018 575 aa31.88■■■□□ 2.69
TNFRSF25-217ENST00000502730 CAMKK2Q96RR4 588 aa31.88■■■□□ 2.69
TNFRSF25-217ENST00000502730 ERBB3P21860 1342 aa31.88■■■□□ 2.69
TNFRSF25-217ENST00000502730 SLC24A1O60721 1099 aa31.87■■■□□ 2.69
TNFRSF25-217ENST00000502730 RGPD2P0DJD1 1756 aa31.86■■■□□ 2.69
TNFRSF25-217ENST00000502730 FBLN1P23142 703 aa31.86■■■□□ 2.69
TNFRSF25-217ENST00000502730 CCDC7Q96M83 1385 aa31.84■■■□□ 2.69
TNFRSF25-217ENST00000502730 MARCH10Q8NA82 808 aaPredicted RBP31.84■■■□□ 2.69
TNFRSF25-217ENST00000502730 FAM208AQ9UK61 1670 aaKnown RBP31.83■■■□□ 2.69
TNFRSF25-217ENST00000502730 PTF1AQ7RTS3 328 aa31.82■■■□□ 2.68
TNFRSF25-217ENST00000502730 ANKRD24Q8TF21 1146 aa31.82■■■□□ 2.68
TNFRSF25-217ENST00000502730 LRP5O75197 1615 aa31.81■■■□□ 2.68
TNFRSF25-217ENST00000502730 CCER1Q8TC90 406 aaPredicted RBP31.8■■■□□ 2.68
TNFRSF25-217ENST00000502730 COG3Q96JB2 828 aa31.8■■■□□ 2.68
TNFRSF25-217ENST00000502730 CDCA7Q9BWT1 371 aaPredicted RBP31.8■■■□□ 2.68
TNFRSF25-217ENST00000502730 NLRP2Q9NX02 1062 aa31.8■■■□□ 2.68
TNFRSF25-217ENST00000502730 TNS2Q63HR2 1409 aa31.8■■■□□ 2.68
TNFRSF25-217ENST00000502730 RGPD3A6NKT7 1758 aaPredicted RBP31.79■■■□□ 2.68
TNFRSF25-217ENST00000502730 RGPD4Q7Z3J3 1758 aa31.79■■■□□ 2.68
TNFRSF25-217ENST00000502730 MAP3K19Q56UN5 1328 aa31.78■■■□□ 2.68
TNFRSF25-217ENST00000502730 R3HDM1Q15032 1099 aaKnown RBP31.78■■■□□ 2.68
TNFRSF25-217ENST00000502730 GGNBP2Q9H3C7 697 aa31.78■■■□□ 2.68
TNFRSF25-217ENST00000502730 PARD3Q8TEW0 1356 aa31.77■■■□□ 2.68
TNFRSF25-217ENST00000502730 FYB1O15117 783 aa31.76■■■□□ 2.67
TNFRSF25-217ENST00000502730 IP6K1Q92551 441 aa31.76■■■□□ 2.67
TNFRSF25-217ENST00000502730 LTV1Q96GA3 475 aaPredicted RBP31.74■■■□□ 2.67
TNFRSF25-217ENST00000502730 CDCA8Q53HL2 280 aa31.73■■■□□ 2.67
TNFRSF25-217ENST00000502730 CARD14Q9BXL6 1004 aa31.73■■■□□ 2.67
TNFRSF25-217ENST00000502730 BCL9O00512 1426 aa31.73■■■□□ 2.67
TNFRSF25-217ENST00000502730 EXOC5O00471 708 aa31.72■■■□□ 2.67
TNFRSF25-217ENST00000502730 NHSQ6T4R5 1651 aa31.72■■■□□ 2.67
TNFRSF25-217ENST00000502730 HOXC9P31274 260 aa31.71■■■□□ 2.67
TNFRSF25-217ENST00000502730 NSD3Q9BZ95 1437 aa31.7■■■□□ 2.67
TNFRSF25-217ENST00000502730 C11orf95C9JLR9 678 aaPredicted RBP31.7■■■□□ 2.67
TNFRSF25-217ENST00000502730 RRS1Q15050 365 aaKnown RBP31.7■■■□□ 2.67
TNFRSF25-217ENST00000502730 SHANK3Q9BYB0 1731 aa31.69■■■□□ 2.66
TNFRSF25-217ENST00000502730 IL2RBP14784 551 aa31.69■■■□□ 2.66
TNFRSF25-217ENST00000502730 AMPHP49418 695 aa31.67■■■□□ 2.66
TNFRSF25-217ENST00000502730 BCL11BQ9C0K0 894 aaPredicted RBP31.67■■■□□ 2.66
TNFRSF25-217ENST00000502730 BTAF1O14981 1849 aa31.64■■■□□ 2.66
TNFRSF25-217ENST00000502730 HSPA5P11021 654 aaKnown RBP31.64■■■□□ 2.66
TNFRSF25-217ENST00000502730 RTL1A6NKG5 1358 aa31.64■■■□□ 2.66
TNFRSF25-217ENST00000502730 KAT6BQ8WYB5 2073 aa31.63■■■□□ 2.65
TNFRSF25-217ENST00000502730 KCNQ2O43526 872 aa31.63■■■□□ 2.65
TNFRSF25-217ENST00000502730 POLR3GLQ9BT43 218 aa31.62■■■□□ 2.65
TNFRSF25-217ENST00000502730 ANKRD26Q9UPS8 1709 aa31.61■■■□□ 2.65
TNFRSF25-217ENST00000502730 PLSCR1O15162 318 aa31.61■■■□□ 2.65
TNFRSF25-217ENST00000502730 ACSBG1Q96GR2 724 aa31.6■■■□□ 2.65
TNFRSF25-217ENST00000502730 MEGF6O75095 1541 aa31.59■■■□□ 2.65
TNFRSF25-217ENST00000502730 MAP2P11137 1827 aaKnown RBP31.59■■■□□ 2.65
TNFRSF25-217ENST00000502730 EIF4G2P78344 907 aaKnown RBP eCLIP31.59■■■□□ 2.65
TNFRSF25-217ENST00000502730 PROM2Q8N271 834 aa31.59■■■□□ 2.65
TNFRSF25-217ENST00000502730 DOT1LQ8TEK3 1739 aa31.58■■■□□ 2.65
TNFRSF25-217ENST00000502730 ANO8Q9HCE9 1232 aaPredicted RBP31.57■■■□□ 2.64
TNFRSF25-217ENST00000502730 USHBP1Q8N6Y0 703 aa31.55■■■□□ 2.64
TNFRSF25-217ENST00000502730 CASZ1Q86V15 1759 aa31.54■■■□□ 2.64
TNFRSF25-217ENST00000502730 HSP90AB2PQ58FF8 381 aa31.54■■■□□ 2.64
TNFRSF25-217ENST00000502730 NBPF14Q5TI25 921 aa31.54■■■□□ 2.64
TNFRSF25-217ENST00000502730 NBPF6Q5VWK0 638 aa31.54■■■□□ 2.64
TNFRSF25-217ENST00000502730 NBPF4Q96M43 638 aa31.54■■■□□ 2.64
TNFRSF25-217ENST00000502730 EMILIN1Q9Y6C2 1016 aa31.53■■■□□ 2.64
TNFRSF25-217ENST00000502730 DDX54Q8TDD1 881 aaKnown RBP31.52■■■□□ 2.64
TNFRSF25-217ENST00000502730 INSRP06213 1382 aa31.52■■■□□ 2.64
TNFRSF25-217ENST00000502730 FLT4P35916 1363 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms