RNA–Protein interactions for RNA: ENST00000502660.5

CSF1R-202, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 2

Gene CSF1R, Length 1,388 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-202ENST00000502660 HSP90AB2PQ58FF8 381 aa21.62■■□□□ 1.05
CSF1R-202ENST00000502660 TNS3Q68CZ2 1445 aa21.62■■□□□ 1.05
CSF1R-202ENST00000502660 PEAK1Q9H792 1746 aa21.62■■□□□ 1.05
CSF1R-202ENST00000502660 TCP11L2Q8N4U5 519 aa21.61■■□□□ 1.05
CSF1R-202ENST00000502660 PLEKHF1Q96S99 279 aa21.61■■□□□ 1.05
CSF1R-202ENST00000502660 NFAT5O94916 1531 aa21.61■■□□□ 1.05
CSF1R-202ENST00000502660 SENP3-EIF4A1A0A087X0R7 540 aa21.61■■□□□ 1.05
CSF1R-202ENST00000502660 NEFMP07197 916 aa21.61■■□□□ 1.05
CSF1R-202ENST00000502660 HOXC9P31274 260 aa21.61■■□□□ 1.05
CSF1R-202ENST00000502660 IP6K1Q92551 441 aa21.61■■□□□ 1.05
CSF1R-202ENST00000502660 MAPK8IP3Q9UPT6 1336 aa21.59■■□□□ 1.05
CSF1R-202ENST00000502660 RSPH6AQ9H0K4 717 aa21.59■■□□□ 1.05
CSF1R-202ENST00000502660 ZNF521Q96K83 1311 aa21.58■■□□□ 1.05
CSF1R-202ENST00000502660 CCDC27Q2M243 656 aa21.58■■□□□ 1.04
CSF1R-202ENST00000502660 ARHGEF25Q86VW2 580 aa21.58■■□□□ 1.04
CSF1R-202ENST00000502660 ILDR2Q71H61 639 aa21.57■■□□□ 1.04
CSF1R-202ENST00000502660 PHRF1Q9P1Y6 1649 aaKnown RBP21.55■■□□□ 1.04
CSF1R-202ENST00000502660 PRKAR2BP31323 418 aa21.55■■□□□ 1.04
CSF1R-202ENST00000502660 GOLGA2Q08379 1002 aa21.55■■□□□ 1.04
CSF1R-202ENST00000502660 PHLPP1O60346 1717 aa21.55■■□□□ 1.04
CSF1R-202ENST00000502660 NHSL1Q5SYE7 1610 aa21.54■■□□□ 1.04
CSF1R-202ENST00000502660 LTN1O94822 1766 aa21.54■■□□□ 1.04
CSF1R-202ENST00000502660 HMOX1P09601 288 aa21.54■■□□□ 1.04
CSF1R-202ENST00000502660 TMPOP42166 694 aaKnown RBP21.53■■□□□ 1.04
CSF1R-202ENST00000502660 PHF23Q9BUL5 403 aaPredicted RBP21.53■■□□□ 1.04
CSF1R-202ENST00000502660 SULT6B1Q6IMI4 303 aa21.52■■□□□ 1.04
CSF1R-202ENST00000502660 WWC1Q8IX03 1113 aa21.52■■□□□ 1.04
CSF1R-202ENST00000502660 WDR63Q8IWG1 891 aa21.51■■□□□ 1.03
CSF1R-202ENST00000502660 RGPD1P0DJD0 1748 aa21.51■■□□□ 1.03
CSF1R-202ENST00000502660 IGSF1Q8N6C5 1336 aa21.5■■□□□ 1.03
CSF1R-202ENST00000502660 NEUROD2Q15784 382 aa21.5■■□□□ 1.03
CSF1R-202ENST00000502660 EYA1Q99502 592 aa21.5■■□□□ 1.03
CSF1R-202ENST00000502660 RRP7AQ9Y3A4 280 aaKnown RBP21.5■■□□□ 1.03
CSF1R-202ENST00000502660 CDCA7LQ96GN5 454 aa21.49■■□□□ 1.03
CSF1R-202ENST00000502660 ZBTB7CA1YPR0 619 aa21.48■■□□□ 1.03
CSF1R-202ENST00000502660 PLEKHG5O94827 1062 aa21.48■■□□□ 1.03
CSF1R-202ENST00000502660 SLFN5Q08AF3 891 aa21.48■■□□□ 1.03
CSF1R-202ENST00000502660 NFE2L2Q16236 605 aa21.48■■□□□ 1.03
CSF1R-202ENST00000502660 LRRC59Q96AG4 307 aaKnown RBP21.48■■□□□ 1.03
CSF1R-202ENST00000502660 E9PSI1 815 aa21.48■■□□□ 1.03
CSF1R-202ENST00000502660 RIPK4P57078 832 aa21.48■■□□□ 1.03
CSF1R-202ENST00000502660 ZC3H6P61129 1189 aaKnown RBP21.48■■□□□ 1.03
CSF1R-202ENST00000502660 CPDO75976 1380 aa21.47■■□□□ 1.03
CSF1R-202ENST00000502660 KDRP35968 1356 aa21.47■■□□□ 1.03
CSF1R-202ENST00000502660 COL16A1Q07092 1604 aaPredicted RBP21.47■■□□□ 1.03
CSF1R-202ENST00000502660 TRMT2AQ8IZ69 625 aaKnown RBP21.47■■□□□ 1.03
CSF1R-202ENST00000502660 CABLES1Q8TDN4 633 aa21.47■■□□□ 1.03
CSF1R-202ENST00000502660 LTV1Q96GA3 475 aaPredicted RBP21.47■■□□□ 1.03
CSF1R-202ENST00000502660 PHACTR3Q96KR7 559 aa21.47■■□□□ 1.03
CSF1R-202ENST00000502660 AHDC1Q5TGY3 1603 aaPredicted RBP21.46■■□□□ 1.03
CSF1R-202ENST00000502660 AEBP1Q8IUX7 1158 aa21.46■■□□□ 1.03
CSF1R-202ENST00000502660 CRYBG1Q9Y4K1 1723 aa21.45■■□□□ 1.02
CSF1R-202ENST00000502660 ABCC6O95255 1503 aa21.44■■□□□ 1.02
CSF1R-202ENST00000502660 LMOD3Q0VAK6 560 aa21.44■■□□□ 1.02
CSF1R-202ENST00000502660 TRIM35Q9UPQ4 493 aa21.44■■□□□ 1.02
CSF1R-202ENST00000502660 GTF3C3Q9Y5Q9 886 aa21.44■■□□□ 1.02
CSF1R-202ENST00000502660 DUSP27Q5VZP5 1158 aa21.43■■□□□ 1.02
CSF1R-202ENST00000502660 ANKRD24Q8TF21 1146 aa21.43■■□□□ 1.02
CSF1R-202ENST00000502660 IL16Q14005 1332 aa21.42■■□□□ 1.02
CSF1R-202ENST00000502660 HAP1P54257 671 aaPredicted RBP21.42■■□□□ 1.02
CSF1R-202ENST00000502660 SUPT16HQ9Y5B9 1047 aaKnown RBP21.42■■□□□ 1.02
CSF1R-202ENST00000502660 AXIN2Q9Y2T1 843 aa21.41■■□□□ 1.02
CSF1R-202ENST00000502660 JCADQ9P266 1359 aa21.41■■□□□ 1.02
CSF1R-202ENST00000502660 CALD1Q05682 793 aaKnown RBP21.4■■□□□ 1.02
CSF1R-202ENST00000502660 NBPF6Q5VWK0 638 aa21.4■■□□□ 1.02
CSF1R-202ENST00000502660 NBPF4Q96M43 638 aa21.4■■□□□ 1.02
CSF1R-202ENST00000502660 KIAA0232Q92628 1395 aa21.39■■□□□ 1.02
CSF1R-202ENST00000502660 SOCS7O14512 581 aa21.39■■□□□ 1.02
CSF1R-202ENST00000502660 MYH16Q9H6N6 1097 aa21.39■■□□□ 1.02
CSF1R-202ENST00000502660 COL18A1P39060 1754 aa21.39■■□□□ 1.01
CSF1R-202ENST00000502660 NEFLP07196 543 aa21.38■■□□□ 1.01
CSF1R-202ENST00000502660 SPINK5Q9NQ38 1064 aaPredicted RBP21.38■■□□□ 1.01
CSF1R-202ENST00000502660 GAS2L2Q8NHY3 880 aa21.37■■□□□ 1.01
CSF1R-202ENST00000502660 RCAN3Q9UKA8 241 aa21.37■■□□□ 1.01
CSF1R-202ENST00000502660 ERBB3P21860 1342 aa21.37■■□□□ 1.01
CSF1R-202ENST00000502660 PRDM11Q9NQV5 511 aa21.36■■□□□ 1.01
CSF1R-202ENST00000502660 NCAPD2Q15021 1401 aa21.36■■□□□ 1.01
CSF1R-202ENST00000502660 CHRNA2Q15822 529 aa21.36■■□□□ 1.01
CSF1R-202ENST00000502660 RGPD5Q99666 1765 aa21.34■■□□□ 1.01
CSF1R-202ENST00000502660 HTATSF1O43719 755 aaKnown RBP21.34■■□□□ 1.01
CSF1R-202ENST00000502660 MTHFSDQ2M296 383 aaKnown RBP21.34■■□□□ 1.01
CSF1R-202ENST00000502660 ABCA3Q99758 1704 aa21.34■■□□□ 1.01
CSF1R-202ENST00000502660 RNF123Q5XPI4 1314 aa21.33■■□□□ 1.01
CSF1R-202ENST00000502660 USHBP1Q8N6Y0 703 aa21.33■■□□□ 1
CSF1R-202ENST00000502660 COL22A1Q8NFW1 1626 aaPredicted RBP21.32■■□□□ 1
CSF1R-202ENST00000502660 CSB-PGBD3P0DP91 1061 aa21.32■■□□□ 1
CSF1R-202ENST00000502660 CAMTA1Q9Y6Y1 1673 aa21.32■■□□□ 1
CSF1R-202ENST00000502660 DLG5Q8TDM6 1919 aa21.31■■□□□ 1
CSF1R-202ENST00000502660 AMOTQ4VCS5 1084 aa21.31■■□□□ 1
CSF1R-202ENST00000502660 PLEKHO1Q53GL0 409 aaPredicted RBP21.31■■□□□ 1
CSF1R-202ENST00000502660 NLRP2Q9NX02 1062 aa21.31■■□□□ 1
CSF1R-202ENST00000502660 FAM208AQ9UK61 1670 aaKnown RBP21.3■■□□□ 1
CSF1R-202ENST00000502660 RGPD2P0DJD1 1756 aa21.3■■□□□ 1
CSF1R-202ENST00000502660 GNAI1P63096 354 aa21.3■■□□□ 1
CSF1R-202ENST00000502660 SPATA31A6Q5VVP1 1343 aa21.3■■□□□ 1
CSF1R-202ENST00000502660 RTF1Q92541 710 aaKnown RBP21.29■■□□□ 1
CSF1R-202ENST00000502660 IFT57Q9NWB7 429 aa21.29■■□□□ 1
CSF1R-202ENST00000502660 LMO7Q8WWI1 1683 aa21.29■■□□□ 1
CSF1R-202ENST00000502660 FAM83GA6ND36 823 aa21.28■■□□□ 1
CSF1R-202ENST00000502660 LRP6O75581 1613 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms