RNA–Protein interactions for RNA: ENST00000498803.5

SPIRE1-211, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-211ENST00000498803 IP6K1Q92551 441 aa11.04□□□□□ -0.64
SPIRE1-211ENST00000498803 RCAN3Q9UKA8 241 aa11.04□□□□□ -0.64
SPIRE1-211ENST00000498803 GCP02774 474 aa11.03□□□□□ -0.64
SPIRE1-211ENST00000498803 HOXC9P31274 260 aa11.03□□□□□ -0.64
SPIRE1-211ENST00000498803 NFE2L2Q16236 605 aa11.03□□□□□ -0.64
SPIRE1-211ENST00000498803 DUSP27Q5VZP5 1158 aa11.03□□□□□ -0.64
SPIRE1-211ENST00000498803 NUTM2GQ5VZR2 741 aa11.03□□□□□ -0.64
SPIRE1-211ENST00000498803 LMOD2Q6P5Q4 547 aa11.03□□□□□ -0.64
SPIRE1-211ENST00000498803 CDCA7LQ96GN5 454 aa11.03□□□□□ -0.64
SPIRE1-211ENST00000498803 RNF123Q5XPI4 1314 aa11.03□□□□□ -0.64
SPIRE1-211ENST00000498803 SENP3-EIF4A1A0A087X0R7 540 aa11.02□□□□□ -0.65
SPIRE1-211ENST00000498803 RIPK4P57078 832 aa11.02□□□□□ -0.65
SPIRE1-211ENST00000498803 FKBP8Q14318 412 aa11.02□□□□□ -0.65
SPIRE1-211ENST00000498803 NEUROD2Q15784 382 aa11.02□□□□□ -0.65
SPIRE1-211ENST00000498803 BRINP3Q76B58 766 aa11.02□□□□□ -0.65
SPIRE1-211ENST00000498803 SLIT3O75094 1523 aa11.02□□□□□ -0.65
SPIRE1-211ENST00000498803 TNS3Q68CZ2 1445 aa11.01□□□□□ -0.65
SPIRE1-211ENST00000498803 HMOX1P09601 288 aa11.01□□□□□ -0.65
SPIRE1-211ENST00000498803 CT47B1P0C2W7 299 aaPredicted RBP11.01□□□□□ -0.65
SPIRE1-211ENST00000498803 XPCQ01831 940 aaPredicted RBP11.01□□□□□ -0.65
SPIRE1-211ENST00000498803 SULT6B1Q6IMI4 303 aa11.01□□□□□ -0.65
SPIRE1-211ENST00000498803 ARHGEF25Q86VW2 580 aa11.01□□□□□ -0.65
SPIRE1-211ENST00000498803 RRP7AQ9Y3A4 280 aaKnown RBP11.01□□□□□ -0.65
SPIRE1-211ENST00000498803 SPATA31A3Q5VYP0 1347 aa11.01□□□□□ -0.65
SPIRE1-211ENST00000498803 IGSF1Q8N6C5 1336 aa11.01□□□□□ -0.65
SPIRE1-211ENST00000498803 NFAT5O94916 1531 aa11□□□□□ -0.65
SPIRE1-211ENST00000498803 GOLGA6L2Q8N9W4 650 aaPredicted RBP11□□□□□ -0.65
SPIRE1-211ENST00000498803 SOS2Q07890 1332 aaPredicted RBP11□□□□□ -0.65
SPIRE1-211ENST00000498803 TRPM3Q9HCF6 1732 aaPredicted RBP11□□□□□ -0.65
SPIRE1-211ENST00000498803 KDRP35968 1356 aa11□□□□□ -0.65
SPIRE1-211ENST00000498803 XIRP1Q702N8 1843 aaKnown RBP11□□□□□ -0.65
SPIRE1-211ENST00000498803 PXDNQ92626 1479 aa11□□□□□ -0.65
SPIRE1-211ENST00000498803 PEAK1Q9H792 1746 aa10.98□□□□□ -0.65
SPIRE1-211ENST00000498803 GAS2L2Q8NHY3 880 aa10.98□□□□□ -0.65
SPIRE1-211ENST00000498803 EYA1Q99502 592 aa10.98□□□□□ -0.65
SPIRE1-211ENST00000498803 TRIM35Q9UPQ4 493 aa10.98□□□□□ -0.65
SPIRE1-211ENST00000498803 PHRF1Q9P1Y6 1649 aaKnown RBP10.98□□□□□ -0.65
SPIRE1-211ENST00000498803 MARF1Q9Y4F3 1742 aaKnown RBP10.98□□□□□ -0.65
SPIRE1-211ENST00000498803 RRP1P56182 461 aaKnown RBP10.97□□□□□ -0.65
SPIRE1-211ENST00000498803 PELP1Q8IZL8 1130 aaKnown RBP10.97□□□□□ -0.65
SPIRE1-211ENST00000498803 PHACTR3Q96KR7 559 aa10.97□□□□□ -0.65
SPIRE1-211ENST00000498803 ABCC6O95255 1503 aa10.97□□□□□ -0.65
SPIRE1-211ENST00000498803 ALS2Q96Q42 1657 aa10.97□□□□□ -0.65
SPIRE1-211ENST00000498803 RGPD1P0DJD0 1748 aa10.96□□□□□ -0.65
SPIRE1-211ENST00000498803 MED1Q15648 1581 aaPredicted RBP10.96□□□□□ -0.65
SPIRE1-211ENST00000498803 CPDO75976 1380 aa10.96□□□□□ -0.65
SPIRE1-211ENST00000498803 HTATSF1O43719 755 aaKnown RBP10.96□□□□□ -0.65
SPIRE1-211ENST00000498803 PLEKHG2Q9H7P9 1386 aa10.95□□□□□ -0.66
SPIRE1-211ENST00000498803 HAP1P54257 671 aaPredicted RBP10.95□□□□□ -0.66
SPIRE1-211ENST00000498803 GNAI1P63096 354 aa10.95□□□□□ -0.66
SPIRE1-211ENST00000498803 AEBP1Q8IUX7 1158 aa10.95□□□□□ -0.66
SPIRE1-211ENST00000498803 ZNF428Q96B54 188 aa10.95□□□□□ -0.66
SPIRE1-211ENST00000498803 SPINK5Q9NQ38 1064 aaPredicted RBP10.95□□□□□ -0.66
SPIRE1-211ENST00000498803 IFT57Q9NWB7 429 aa10.95□□□□□ -0.66
SPIRE1-211ENST00000498803 RTF1Q92541 710 aaKnown RBP10.94□□□□□ -0.66
SPIRE1-211ENST00000498803 LTBP4Q8N2S1 1624 aa10.94□□□□□ -0.66
SPIRE1-211ENST00000498803 ZBTB7CA1YPR0 619 aa10.93□□□□□ -0.66
SPIRE1-211ENST00000498803 AMOTQ4VCS5 1084 aa10.93□□□□□ -0.66
SPIRE1-211ENST00000498803 ANKRD24Q8TF21 1146 aa10.93□□□□□ -0.66
SPIRE1-211ENST00000498803 DDX17Q92841 729 aaKnown RBP10.93□□□□□ -0.66
SPIRE1-211ENST00000498803 LRRC59Q96AG4 307 aaKnown RBP10.93□□□□□ -0.66
SPIRE1-211ENST00000498803 LTV1Q96GA3 475 aaPredicted RBP10.93□□□□□ -0.66
SPIRE1-211ENST00000498803 PPP4R2Q9NY27 417 aa10.93□□□□□ -0.66
SPIRE1-211ENST00000498803 FANCIQ9NVI1 1328 aa10.92□□□□□ -0.66
SPIRE1-211ENST00000498803 TOM1O60784 492 aa10.92□□□□□ -0.66
SPIRE1-211ENST00000498803 ZC3H6P61129 1189 aaKnown RBP10.92□□□□□ -0.66
SPIRE1-211ENST00000498803 PLEKHO1Q53GL0 409 aaPredicted RBP10.92□□□□□ -0.66
SPIRE1-211ENST00000498803 CFAP44Q96MT7 982 aa10.92□□□□□ -0.66
SPIRE1-211ENST00000498803 LTN1O94822 1766 aa10.92□□□□□ -0.66
SPIRE1-211ENST00000498803 ERBB3P21860 1342 aa10.91□□□□□ -0.66
SPIRE1-211ENST00000498803 MS4A1P11836 297 aa10.91□□□□□ -0.66
SPIRE1-211ENST00000498803 AEBP2Q6ZN18 517 aaPredicted RBP10.91□□□□□ -0.66
SPIRE1-211ENST00000498803 NCAPD2Q15021 1401 aa10.91□□□□□ -0.66
SPIRE1-211ENST00000498803 GNAT3A8MTJ3 354 aa10.9□□□□□ -0.66
SPIRE1-211ENST00000498803 ZNF853P0CG23 659 aa10.9□□□□□ -0.66
SPIRE1-211ENST00000498803 MTHFSDQ2M296 383 aaKnown RBP10.9□□□□□ -0.66
SPIRE1-211ENST00000498803 NBPF6Q5VWK0 638 aa10.9□□□□□ -0.66
SPIRE1-211ENST00000498803 NBPF4Q96M43 638 aa10.9□□□□□ -0.66
SPIRE1-211ENST00000498803 PRDM11Q9NQV5 511 aa10.9□□□□□ -0.66
SPIRE1-211ENST00000498803 BABAM1Q9NWV8 329 aa10.9□□□□□ -0.66
SPIRE1-211ENST00000498803 NHSL1Q5SYE7 1610 aa10.9□□□□□ -0.66
SPIRE1-211ENST00000498803 RARSP54136 660 aaKnown RBP10.89□□□□□ -0.67
SPIRE1-211ENST00000498803 PDE3AQ14432 1141 aa10.89□□□□□ -0.67
SPIRE1-211ENST00000498803 KIAA0232Q92628 1395 aa10.89□□□□□ -0.67
SPIRE1-211ENST00000498803 MAP3K5Q99683 1374 aa10.89□□□□□ -0.67
SPIRE1-211ENST00000498803 AHDC1Q5TGY3 1603 aaPredicted RBP10.88□□□□□ -0.67
SPIRE1-211ENST00000498803 PLEKHG5O94827 1062 aa10.88□□□□□ -0.67
SPIRE1-211ENST00000498803 CSB-PGBD3P0DP91 1061 aa10.88□□□□□ -0.67
SPIRE1-211ENST00000498803 CANXP27824 592 aaKnown RBP10.88□□□□□ -0.67
SPIRE1-211ENST00000498803 IRX6P78412 446 aaPredicted RBP10.88□□□□□ -0.67
SPIRE1-211ENST00000498803 EXOSC9Q06265 439 aaKnown RBP10.88□□□□□ -0.67
SPIRE1-211ENST00000498803 AAMPQ13685 434 aa10.88□□□□□ -0.67
SPIRE1-211ENST00000498803 ALDH1L2Q3SY69 923 aa10.88□□□□□ -0.67
SPIRE1-211ENST00000498803 CABLES1Q8TDN4 633 aa10.88□□□□□ -0.67
SPIRE1-211ENST00000498803 RAPGEF4Q8WZA2 1011 aa10.88□□□□□ -0.67
SPIRE1-211ENST00000498803 TSR2Q969E8 191 aaKnown RBP10.88□□□□□ -0.67
SPIRE1-211ENST00000498803 CHMP4AQ9BY43 222 aa10.88□□□□□ -0.67
SPIRE1-211ENST00000498803 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.88□□□□□ -0.67
SPIRE1-211ENST00000498803 AXIN2Q9Y2T1 843 aa10.88□□□□□ -0.67
SPIRE1-211ENST00000498803 LAS1LQ9Y4W2 734 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms