RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 TRIM52Q96A61 297 aa5.34□□□□□ -1.55
CLTC-209ENST00000498711 CDCA7LQ96GN5 454 aa5.34□□□□□ -1.55
CLTC-209ENST00000498711 HIRIP3Q9BW71 556 aaPredicted RBP5.34□□□□□ -1.55
CLTC-209ENST00000498711 CDK11AQ9UQ88 783 aaPredicted RBP5.34□□□□□ -1.55
CLTC-209ENST00000498711 MTMR7Q9Y216 660 aa5.34□□□□□ -1.55
CLTC-209ENST00000498711 CDK13Q14004 1512 aaKnown RBP5.34□□□□□ -1.55
CLTC-209ENST00000498711 AP1G2O75843 785 aa5.34□□□□□ -1.56
CLTC-209ENST00000498711 NBPF8Q3BBV2 869 aa5.34□□□□□ -1.56
CLTC-209ENST00000498711 ZNF454Q8N9F8 522 aa5.34□□□□□ -1.56
CLTC-209ENST00000498711 PBXIP1Q96AQ6 731 aa5.34□□□□□ -1.56
CLTC-209ENST00000498711 LILRB3O75022 631 aa5.33□□□□□ -1.56
CLTC-209ENST00000498711 QPCTQ16769 361 aa5.33□□□□□ -1.56
CLTC-209ENST00000498711 ZNF428Q96B54 188 aa5.33□□□□□ -1.56
CLTC-209ENST00000498711 ABCA6Q8N139 1617 aa5.33□□□□□ -1.56
CLTC-209ENST00000498711 ATP10AO60312 1499 aa5.33□□□□□ -1.56
CLTC-209ENST00000498711 INSRP06213 1382 aa5.33□□□□□ -1.56
CLTC-209ENST00000498711 RCCD1A6NED2 376 aa5.33□□□□□ -1.56
CLTC-209ENST00000498711 USP17L8P0C7I0 530 aa5.33□□□□□ -1.56
CLTC-209ENST00000498711 CCDC184Q52MB2 194 aa5.33□□□□□ -1.56
CLTC-209ENST00000498711 NDUFB9Q9Y6M9 179 aa5.33□□□□□ -1.56
CLTC-209ENST00000498711 MOXD2PA6NHM9 499 aa5.32□□□□□ -1.56
CLTC-209ENST00000498711 ZNF710Q8N1W2 664 aa5.32□□□□□ -1.56
CLTC-209ENST00000498711 E9PCH4 1651 aa5.32□□□□□ -1.56
CLTC-209ENST00000498711 MADDQ8WXG6 1647 aa5.32□□□□□ -1.56
CLTC-209ENST00000498711 SAMD9LQ8IVG5 1584 aa5.32□□□□□ -1.56
CLTC-209ENST00000498711 RTEL1-TNFRSF6BF6WH68 1400 aa5.32□□□□□ -1.56
CLTC-209ENST00000498711 KCNA1Q09470 495 aa5.32□□□□□ -1.56
CLTC-209ENST00000498711 MYT1LQ9UL68 1186 aa5.32□□□□□ -1.56
CLTC-209ENST00000498711 USTQ9Y2C2 406 aa5.32□□□□□ -1.56
CLTC-209ENST00000498711 SHANK2Q9UPX8 1470 aa5.32□□□□□ -1.56
CLTC-209ENST00000498711 RNF17Q9BXT8 1623 aaKnown RBP5.31□□□□□ -1.56
CLTC-209ENST00000498711 KIF7Q2M1P5 1343 aa5.31□□□□□ -1.56
CLTC-209ENST00000498711 PLEKHD1A6NEE1 506 aa5.31□□□□□ -1.56
CLTC-209ENST00000498711 EYA1Q99502 592 aa5.31□□□□□ -1.56
CLTC-209ENST00000498711 ADAM33Q9BZ11 813 aa5.31□□□□□ -1.56
CLTC-209ENST00000498711 ARHGAP5Q13017 1502 aa5.31□□□□□ -1.56
CLTC-209ENST00000498711 KIDINS220Q9ULH0 1771 aa5.31□□□□□ -1.56
CLTC-209ENST00000498711 POTEFA5A3E0 1075 aa5.31□□□□□ -1.56
CLTC-209ENST00000498711 NUTM2BA6NNL0 878 aaPredicted RBP5.31□□□□□ -1.56
CLTC-209ENST00000498711 DDX11L8A8MPP1 907 aa5.31□□□□□ -1.56
CLTC-209ENST00000498711 NUTM2EB1AL46 878 aaPredicted RBP5.31□□□□□ -1.56
CLTC-209ENST00000498711 BRD1O95696 1058 aa5.31□□□□□ -1.56
CLTC-209ENST00000498711 NUTM2DQ5VT03 806 aaPredicted RBP5.31□□□□□ -1.56
CLTC-209ENST00000498711 PRPF38BQ5VTL8 546 aaKnown RBP5.31□□□□□ -1.56
CLTC-209ENST00000498711 NUTM2AQ8IVF1 878 aaPredicted RBP5.31□□□□□ -1.56
CLTC-209ENST00000498711 IQSEC2Q5JU85 1478 aa5.31□□□□□ -1.56
CLTC-209ENST00000498711 RALGAPBQ86X10 1494 aa5.31□□□□□ -1.56
CLTC-209ENST00000498711 LRPPRCP42704 1394 aaKnown RBP5.31□□□□□ -1.56
CLTC-209ENST00000498711 KTN1Q86UP2 1357 aaKnown RBP5.31□□□□□ -1.56
CLTC-209ENST00000498711 NDUFV2P19404 249 aa5.3□□□□□ -1.56
CLTC-209ENST00000498711 HNRNPUQ00839 825 aaKnown RBP eCLIP5.3□□□□□ -1.56
CLTC-209ENST00000498711 RTL5Q5HYW3 569 aaPredicted RBP5.3□□□□□ -1.56
CLTC-209ENST00000498711 BCL11AQ9H165 835 aa5.3□□□□□ -1.56
CLTC-209ENST00000498711 RRP7BPQ9NSQ0 103 aa5.3□□□□□ -1.56
CLTC-209ENST00000498711 GPATCH8Q9UKJ3 1502 aaKnown RBP5.3□□□□□ -1.56
CLTC-209ENST00000498711 RIMS1Q86UR5 1692 aaKnown RBP5.3□□□□□ -1.56
CLTC-209ENST00000498711 WASHC4Q2M389 1173 aa5.3□□□□□ -1.56
CLTC-209ENST00000498711 HDGFL1Q5TGJ6 251 aa5.3□□□□□ -1.56
CLTC-209ENST00000498711 GJD4Q96KN9 370 aaPredicted RBP5.3□□□□□ -1.56
CLTC-209ENST00000498711 NPATQ14207 1427 aa5.3□□□□□ -1.56
CLTC-209ENST00000498711 KDM5AP29375 1690 aaKnown RBP5.3□□□□□ -1.56
CLTC-209ENST00000498711 CSB-PGBD3P0DP91 1061 aa5.3□□□□□ -1.56
CLTC-209ENST00000498711 DNAJB2P25686 324 aa5.3□□□□□ -1.56
CLTC-209ENST00000498711 METRNQ9UJH8 293 aa5.3□□□□□ -1.56
CLTC-209ENST00000498711 PCDHB15Q9Y5E8 787 aa5.3□□□□□ -1.56
CLTC-209ENST00000498711 ATP7AQ04656 1500 aa5.3□□□□□ -1.56
CLTC-209ENST00000498711 ROCK2O75116 1388 aaKnown RBP5.29□□□□□ -1.56
CLTC-209ENST00000498711 LAMC1P11047 1609 aa5.29□□□□□ -1.56
CLTC-209ENST00000498711 PTPRMP28827 1452 aa5.29□□□□□ -1.56
CLTC-209ENST00000498711 CAMSAP2Q08AD1 1489 aa5.29□□□□□ -1.56
CLTC-209ENST00000498711 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.29□□□□□ -1.56
CLTC-209ENST00000498711 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.29□□□□□ -1.56
CLTC-209ENST00000498711 SIGLEC1Q9BZZ2 1709 aa5.29□□□□□ -1.56
CLTC-209ENST00000498711 CFAP70Q5T0N1 1121 aa5.29□□□□□ -1.56
CLTC-209ENST00000498711 FOXD4L5Q5VV16 416 aaPredicted RBP5.29□□□□□ -1.56
CLTC-209ENST00000498711 ADAMTS19Q8TE59 1207 aa5.29□□□□□ -1.56
CLTC-209ENST00000498711 FOXD4L4Q8WXT5 416 aaPredicted RBP5.29□□□□□ -1.56
CLTC-209ENST00000498711 ZBTB3Q9H5J0 574 aa5.29□□□□□ -1.56
CLTC-209ENST00000498711 CABLES1Q8TDN4 633 aa5.28□□□□□ -1.56
CLTC-209ENST00000498711 FAM198AQ9UFP1 575 aa5.28□□□□□ -1.56
CLTC-209ENST00000498711 NBPF26B4DH59 902 aa5.28□□□□□ -1.56
CLTC-209ENST00000498711 RFX1P22670 979 aa5.28□□□□□ -1.56
CLTC-209ENST00000498711 TMEM134Q9H6X4 195 aa5.28□□□□□ -1.56
CLTC-209ENST00000498711 RBM25P49756 843 aaKnown RBP5.27□□□□□ -1.57
CLTC-209ENST00000498711 EFCAB2Q5VUJ9 269 aa5.27□□□□□ -1.57
CLTC-209ENST00000498711 NUDT18Q6ZVK8 323 aa5.27□□□□□ -1.57
CLTC-209ENST00000498711 NUDCQ9Y266 331 aa5.27□□□□□ -1.57
CLTC-209ENST00000498711 DEPDC5O75140 1603 aa5.27□□□□□ -1.57
CLTC-209ENST00000498711 KDM4AO75164 1064 aa5.27□□□□□ -1.57
CLTC-209ENST00000498711 NUDT7P0C024 238 aa5.27□□□□□ -1.57
CLTC-209ENST00000498711 RDH13Q8NBN7 331 aa5.27□□□□□ -1.57
CLTC-209ENST00000498711 PNISRQ8TF01 805 aaKnown RBP5.27□□□□□ -1.57
CLTC-209ENST00000498711 PPP1R12CQ9BZL4 782 aa5.27□□□□□ -1.57
CLTC-209ENST00000498711 SCUBE2Q9NQ36 999 aa5.27□□□□□ -1.57
CLTC-209ENST00000498711 SCAPERQ9BY12 1400 aa5.27□□□□□ -1.57
CLTC-209ENST00000498711 C3P01024 1663 aa5.27□□□□□ -1.57
CLTC-209ENST00000498711 USP46P62068 366 aa5.27□□□□□ -1.57
CLTC-209ENST00000498711 TSKSQ9UJT2 592 aa5.27□□□□□ -1.57
CLTC-209ENST00000498711 CCDC141Q6ZP82 1450 aa5.26□□□□□ -1.57
CLTC-209ENST00000498711 BRD4O60885 1362 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms