RNA–Protein interactions for RNA: ENST00000498660.1

TUBA4A-210, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-210ENST00000498660 SLIT3O75094 1523 aa11.71□□□□□ -0.53
TUBA4A-210ENST00000498660 UNC5CLQ8IV45 518 aa11.71□□□□□ -0.53
TUBA4A-210ENST00000498660 NUDCQ9Y266 331 aa11.71□□□□□ -0.53
TUBA4A-210ENST00000498660 NFAT5O94916 1531 aa11.7□□□□□ -0.54
TUBA4A-210ENST00000498660 SPATA31A3Q5VYP0 1347 aa11.7□□□□□ -0.54
TUBA4A-210ENST00000498660 ABTB2Q8N961 1025 aa11.7□□□□□ -0.54
TUBA4A-210ENST00000498660 POLKQ9UBT6 870 aa11.7□□□□□ -0.54
TUBA4A-210ENST00000498660 ADAMTS8Q9UP79 889 aa11.7□□□□□ -0.54
TUBA4A-210ENST00000498660 SLIT2O94813 1529 aa11.7□□□□□ -0.54
TUBA4A-210ENST00000498660 TNS3Q68CZ2 1445 aa11.69□□□□□ -0.54
TUBA4A-210ENST00000498660 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.69□□□□□ -0.54
TUBA4A-210ENST00000498660 SBNO1A3KN83 1393 aa11.69□□□□□ -0.54
TUBA4A-210ENST00000498660 RTL1A6NKG5 1358 aa11.69□□□□□ -0.54
TUBA4A-210ENST00000498660 KIF24Q5T7B8 1368 aa11.69□□□□□ -0.54
TUBA4A-210ENST00000498660 DIAPH1O60610 1272 aaKnown RBP11.69□□□□□ -0.54
TUBA4A-210ENST00000498660 NLRP6P59044 892 aa11.69□□□□□ -0.54
TUBA4A-210ENST00000498660 EMILIN1Q9Y6C2 1016 aa11.69□□□□□ -0.54
TUBA4A-210ENST00000498660 CRYBG1Q9Y4K1 1723 aa11.69□□□□□ -0.54
TUBA4A-210ENST00000498660 FLT4P35916 1363 aa11.68□□□□□ -0.54
TUBA4A-210ENST00000498660 PPM1GO15355 546 aaPredicted RBP11.68□□□□□ -0.54
TUBA4A-210ENST00000498660 KRT28Q7Z3Y7 464 aa11.68□□□□□ -0.54
TUBA4A-210ENST00000498660 RGPD1P0DJD0 1748 aa11.68□□□□□ -0.54
TUBA4A-210ENST00000498660 RRS1Q15050 365 aaKnown RBP11.67□□□□□ -0.54
TUBA4A-210ENST00000498660 GLI3P10071 1580 aa11.67□□□□□ -0.54
TUBA4A-210ENST00000498660 ARHGEF10O15013 1369 aa11.67□□□□□ -0.54
TUBA4A-210ENST00000498660 U2SURPO15042 1029 aaKnown RBP11.66□□□□□ -0.54
TUBA4A-210ENST00000498660 U2AF1L5P0DN76 240 aaPredicted RBP11.66□□□□□ -0.54
TUBA4A-210ENST00000498660 U2AF1Q01081 240 aaKnown RBP eCLIP11.66□□□□□ -0.54
TUBA4A-210ENST00000498660 ABCA3Q99758 1704 aa11.66□□□□□ -0.54
TUBA4A-210ENST00000498660 USP19O94966 1318 aa11.65□□□□□ -0.54
TUBA4A-210ENST00000498660 SOX12O15370 315 aa11.65□□□□□ -0.54
TUBA4A-210ENST00000498660 ONECUT3O60422 494 aaPredicted RBP11.65□□□□□ -0.54
TUBA4A-210ENST00000498660 VPS72Q15906 364 aa11.65□□□□□ -0.54
TUBA4A-210ENST00000498660 NUTM2GQ5VZR2 741 aa11.65□□□□□ -0.54
TUBA4A-210ENST00000498660 KCNH5Q8NCM2 988 aa11.65□□□□□ -0.54
TUBA4A-210ENST00000498660 ABCC6O95255 1503 aa11.65□□□□□ -0.55
TUBA4A-210ENST00000498660 MAP3K19Q56UN5 1328 aa11.64□□□□□ -0.55
TUBA4A-210ENST00000498660 FBLN1P23142 703 aa11.64□□□□□ -0.55
TUBA4A-210ENST00000498660 CCDC146Q8IYE0 955 aa11.64□□□□□ -0.55
TUBA4A-210ENST00000498660 SEPT12Q8IYM1 358 aa11.64□□□□□ -0.55
TUBA4A-210ENST00000498660 NGEFQ8N5V2 710 aa11.64□□□□□ -0.55
TUBA4A-210ENST00000498660 RUNDC1Q96C34 613 aa11.64□□□□□ -0.55
TUBA4A-210ENST00000498660 PNNQ9H307 717 aaKnown RBP11.64□□□□□ -0.55
TUBA4A-210ENST00000498660 MAPK8IP3Q9UPT6 1336 aa11.63□□□□□ -0.55
TUBA4A-210ENST00000498660 HAP1P54257 671 aaPredicted RBP11.63□□□□□ -0.55
TUBA4A-210ENST00000498660 LMOD2Q6P5Q4 547 aa11.63□□□□□ -0.55
TUBA4A-210ENST00000498660 BRWD3Q6RI45 1802 aa11.63□□□□□ -0.55
TUBA4A-210ENST00000498660 FAM208AQ9UK61 1670 aaKnown RBP11.62□□□□□ -0.55
TUBA4A-210ENST00000498660 IL13P35225 146 aa11.62□□□□□ -0.55
TUBA4A-210ENST00000498660 AMPHP49418 695 aa11.62□□□□□ -0.55
TUBA4A-210ENST00000498660 PDE3BQ13370 1112 aa11.62□□□□□ -0.55
TUBA4A-210ENST00000498660 DEFB132Q7Z7B7 95 aa11.62□□□□□ -0.55
TUBA4A-210ENST00000498660 CABLES1Q8TDN4 633 aa11.62□□□□□ -0.55
TUBA4A-210ENST00000498660 NWD2Q9ULI1 1742 aa11.61□□□□□ -0.55
TUBA4A-210ENST00000498660 NEFMP07197 916 aa11.61□□□□□ -0.55
TUBA4A-210ENST00000498660 SF3B2Q13435 895 aaKnown RBP11.61□□□□□ -0.55
TUBA4A-210ENST00000498660 CAMTA1Q9Y6Y1 1673 aa11.6□□□□□ -0.55
TUBA4A-210ENST00000498660 FAM83GA6ND36 823 aa11.6□□□□□ -0.55
TUBA4A-210ENST00000498660 APAF1O14727 1248 aa11.6□□□□□ -0.55
TUBA4A-210ENST00000498660 FCHSD2O94868 740 aa11.6□□□□□ -0.55
TUBA4A-210ENST00000498660 EIF4A2Q14240 407 aaKnown RBP11.6□□□□□ -0.55
TUBA4A-210ENST00000498660 KRT27Q7Z3Y8 459 aa11.6□□□□□ -0.55
TUBA4A-210ENST00000498660 SALL2Q9Y467 1007 aaPredicted RBP11.6□□□□□ -0.55
TUBA4A-210ENST00000498660 PLCH1Q4KWH8 1693 aa11.59□□□□□ -0.55
TUBA4A-210ENST00000498660 SENP3-EIF4A1A0A087X0R7 540 aa11.59□□□□□ -0.55
TUBA4A-210ENST00000498660 HOXC9P31274 260 aa11.59□□□□□ -0.55
TUBA4A-210ENST00000498660 RSPH6AQ9H0K4 717 aa11.59□□□□□ -0.55
TUBA4A-210ENST00000498660 PLEKHG5O94827 1062 aa11.58□□□□□ -0.56
TUBA4A-210ENST00000498660 GCP02774 474 aa11.58□□□□□ -0.56
TUBA4A-210ENST00000498660 NCBP3Q53F19 620 aaKnown RBP11.58□□□□□ -0.56
TUBA4A-210ENST00000498660 HSP90AB2PQ58FF8 381 aa11.58□□□□□ -0.56
TUBA4A-210ENST00000498660 TCP11L2Q8N4U5 519 aa11.58□□□□□ -0.56
TUBA4A-210ENST00000498660 PLEKHF1Q96S99 279 aa11.58□□□□□ -0.56
TUBA4A-210ENST00000498660 CCDC9Q9Y3X0 531 aaKnown RBP11.58□□□□□ -0.56
TUBA4A-210ENST00000498660 ZNF521Q96K83 1311 aa11.58□□□□□ -0.56
TUBA4A-210ENST00000498660 DLG5Q8TDM6 1919 aa11.57□□□□□ -0.56
TUBA4A-210ENST00000498660 ZBTB7CA1YPR0 619 aa11.57□□□□□ -0.56
TUBA4A-210ENST00000498660 PRKAR2BP31323 418 aa11.57□□□□□ -0.56
TUBA4A-210ENST00000498660 IP6K1Q92551 441 aa11.57□□□□□ -0.56
TUBA4A-210ENST00000498660 COL18A1P39060 1754 aa11.56□□□□□ -0.56
TUBA4A-210ENST00000498660 RGPD5Q99666 1765 aa11.56□□□□□ -0.56
TUBA4A-210ENST00000498660 HMOX1P09601 288 aa11.56□□□□□ -0.56
TUBA4A-210ENST00000498660 CCDC27Q2M243 656 aa11.56□□□□□ -0.56
TUBA4A-210ENST00000498660 ARHGEF25Q86VW2 580 aa11.56□□□□□ -0.56
TUBA4A-210ENST00000498660 RGPD2P0DJD1 1756 aa11.56□□□□□ -0.56
TUBA4A-210ENST00000498660 IGSF1Q8N6C5 1336 aa11.56□□□□□ -0.56
TUBA4A-210ENST00000498660 LMO7Q8WWI1 1683 aa11.55□□□□□ -0.56
TUBA4A-210ENST00000498660 CPDO75976 1380 aa11.55□□□□□ -0.56
TUBA4A-210ENST00000498660 KDRP35968 1356 aa11.55□□□□□ -0.56
TUBA4A-210ENST00000498660 BAG6P46379 1132 aa11.55□□□□□ -0.56
TUBA4A-210ENST00000498660 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
TUBA4A-210ENST00000498660 BTG4Q9NY30 223 aa11.55□□□□□ -0.56
TUBA4A-210ENST00000498660 LRP5O75197 1615 aa11.54□□□□□ -0.56
TUBA4A-210ENST00000498660 FAM98CQ17RN3 349 aaKnown RBP11.54□□□□□ -0.56
TUBA4A-210ENST00000498660 SULT6B1Q6IMI4 303 aa11.54□□□□□ -0.56
TUBA4A-210ENST00000498660 RRP7AQ9Y3A4 280 aaKnown RBP11.54□□□□□ -0.56
TUBA4A-210ENST00000498660 NRAPQ86VF7 1730 aa11.54□□□□□ -0.56
TUBA4A-210ENST00000498660 NCAPD2Q15021 1401 aa11.53□□□□□ -0.56
TUBA4A-210ENST00000498660 A0A0G2JS52 829 aa11.53□□□□□ -0.56
TUBA4A-210ENST00000498660 E9PSI1 815 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms