RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 PARP4Q9UKK3 1724 aaKnown RBP19.54■□□□□ 0.72
SHANK2-217ENST00000498519 CARD10Q9BWT7 1032 aa19.54■□□□□ 0.72
SHANK2-217ENST00000498519 RREB1Q92766 1687 aa19.53■□□□□ 0.72
SHANK2-217ENST00000498519 CPSF1Q10570 1443 aaKnown RBP19.53■□□□□ 0.72
SHANK2-217ENST00000498519 EXOC5O00471 708 aa19.53■□□□□ 0.72
SHANK2-217ENST00000498519 YY1P25490 414 aa19.53■□□□□ 0.72
SHANK2-217ENST00000498519 AXIN2Q9Y2T1 843 aa19.53■□□□□ 0.72
SHANK2-217ENST00000498519 ROCK2O75116 1388 aaKnown RBP19.53■□□□□ 0.72
SHANK2-217ENST00000498519 CCDC7Q96M83 1385 aa19.5■□□□□ 0.71
SHANK2-217ENST00000498519 MARCH10Q8NA82 808 aaPredicted RBP19.5■□□□□ 0.71
SHANK2-217ENST00000498519 QRICH2Q9H0J4 1663 aa19.49■□□□□ 0.71
SHANK2-217ENST00000498519 NUP188Q5SRE5 1749 aa19.49■□□□□ 0.71
SHANK2-217ENST00000498519 KTN1Q86UP2 1357 aaKnown RBP19.48■□□□□ 0.71
SHANK2-217ENST00000498519 SOX12O15370 315 aa19.48■□□□□ 0.71
SHANK2-217ENST00000498519 STK32BQ9NY57 414 aa19.48■□□□□ 0.71
SHANK2-217ENST00000498519 TRPM1Q7Z4N2 1603 aa19.46■□□□□ 0.71
SHANK2-217ENST00000498519 RGPD3A6NKT7 1758 aaPredicted RBP19.45■□□□□ 0.7
SHANK2-217ENST00000498519 RGPD4Q7Z3J3 1758 aa19.45■□□□□ 0.7
SHANK2-217ENST00000498519 LRRC37A3O60309 1634 aa19.45■□□□□ 0.7
SHANK2-217ENST00000498519 ABCC6O95255 1503 aa19.45■□□□□ 0.7
SHANK2-217ENST00000498519 PEAK1Q9H792 1746 aa19.45■□□□□ 0.7
SHANK2-217ENST00000498519 PIK3C2AO00443 1686 aa19.44■□□□□ 0.7
SHANK2-217ENST00000498519 NEUROD1Q13562 356 aa19.44■□□□□ 0.7
SHANK2-217ENST00000498519 TXNRD1Q16881 649 aa19.44■□□□□ 0.7
SHANK2-217ENST00000498519 ANO8Q9HCE9 1232 aaPredicted RBP19.44■□□□□ 0.7
SHANK2-217ENST00000498519 SBNO2Q9Y2G9 1366 aa19.44■□□□□ 0.7
SHANK2-217ENST00000498519 PROM2Q8N271 834 aa19.43■□□□□ 0.7
SHANK2-217ENST00000498519 SLC15A2Q16348 729 aa19.42■□□□□ 0.7
SHANK2-217ENST00000498519 HDGFL2Q7Z4V5 671 aaPredicted RBP19.42■□□□□ 0.7
SHANK2-217ENST00000498519 SIN3AQ96ST3 1273 aa19.42■□□□□ 0.7
SHANK2-217ENST00000498519 USP31Q70CQ4 1352 aa19.42■□□□□ 0.7
SHANK2-217ENST00000498519 PTF1AQ7RTS3 328 aa19.41■□□□□ 0.7
SHANK2-217ENST00000498519 NLRP2Q9NX02 1062 aa19.41■□□□□ 0.7
SHANK2-217ENST00000498519 COL18A1P39060 1754 aa19.4■□□□□ 0.7
SHANK2-217ENST00000498519 ZBTB7AO95365 584 aa19.4■□□□□ 0.7
SHANK2-217ENST00000498519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.4■□□□□ 0.78e-7■■■□□ 16.3
SHANK2-217ENST00000498519 ERBB3P21860 1342 aa19.4■□□□□ 0.7
SHANK2-217ENST00000498519 TNS2Q63HR2 1409 aa19.4■□□□□ 0.7
SHANK2-217ENST00000498519 IL2RBP14784 551 aa19.39■□□□□ 0.69
SHANK2-217ENST00000498519 TMC1Q8TDI8 760 aa19.39■□□□□ 0.69
SHANK2-217ENST00000498519 CARD11Q9BXL7 1154 aa19.39■□□□□ 0.69
SHANK2-217ENST00000498519 MTFR1LQ9H019 292 aa19.39■□□□□ 0.69
SHANK2-217ENST00000498519 TERF2IPQ9NYB0 399 aa19.39■□□□□ 0.69
SHANK2-217ENST00000498519 NFAT5O94916 1531 aa19.39■□□□□ 0.69
SHANK2-217ENST00000498519 PUS7Q96PZ0 661 aaKnown RBP19.37■□□□□ 0.69
SHANK2-217ENST00000498519 SLC24A1O60721 1099 aa19.36■□□□□ 0.69
SHANK2-217ENST00000498519 PTGER2P43116 358 aa19.36■□□□□ 0.69
SHANK2-217ENST00000498519 ATF5Q9Y2D1 282 aaPredicted RBP19.36■□□□□ 0.69
SHANK2-217ENST00000498519 NME9Q86XW9 330 aa19.34■□□□□ 0.69
SHANK2-217ENST00000498519 ANKRD24Q8TF21 1146 aa19.34■□□□□ 0.69
SHANK2-217ENST00000498519 PDGFDQ9GZP0 370 aaPredicted RBP19.34■□□□□ 0.69
SHANK2-217ENST00000498519 EDC4Q6P2E9 1401 aaKnown RBP19.34■□□□□ 0.69
SHANK2-217ENST00000498519 ACSBG1Q96GR2 724 aa19.33■□□□□ 0.68
SHANK2-217ENST00000498519 SYT17Q9BSW7 474 aa19.32■□□□□ 0.68
SHANK2-217ENST00000498519 AKAP12Q02952 1782 aa19.32■□□□□ 0.68
SHANK2-217ENST00000498519 SBF2Q86WG5 1849 aa19.31■□□□□ 0.68
SHANK2-217ENST00000498519 FHDC1Q9C0D6 1143 aaPredicted RBP19.31■□□□□ 0.68
SHANK2-217ENST00000498519 SLC12A5Q9H2X9 1139 aa19.31■□□□□ 0.68
SHANK2-217ENST00000498519 CASZ1Q86V15 1759 aa19.3■□□□□ 0.68
SHANK2-217ENST00000498519 SLC27A3Q5K4L6 730 aa19.3■□□□□ 0.68
SHANK2-217ENST00000498519 ARXQ96QS3 562 aa19.3■□□□□ 0.68
SHANK2-217ENST00000498519 WNK3Q9BYP7 1800 aa19.3■□□□□ 0.68
SHANK2-217ENST00000498519 IP6K1Q92551 441 aa19.29■□□□□ 0.68
SHANK2-217ENST00000498519 SLC16A10Q8TF71 515 aa19.28■□□□□ 0.68
SHANK2-217ENST00000498519 SGIP1Q9BQI5 828 aa19.28■□□□□ 0.68
SHANK2-217ENST00000498519 TONSLQ96HA7 1378 aa19.28■□□□□ 0.68
SHANK2-217ENST00000498519 CD163L1Q9NR16 1453 aa19.28■□□□□ 0.68
SHANK2-217ENST00000498519 UTRNP46939 3433 aa19.26■□□□□ 0.67
SHANK2-217ENST00000498519 HMGB2P26583 209 aaKnown RBP19.26■□□□□ 0.67
SHANK2-217ENST00000498519 COG3Q96JB2 828 aa19.26■□□□□ 0.67
SHANK2-217ENST00000498519 A0A1W2PP64 1363 aa19.26■□□□□ 0.67
SHANK2-217ENST00000498519 MAP3K5Q99683 1374 aa19.26■□□□□ 0.67
SHANK2-217ENST00000498519 MON2Q7Z3U7 1717 aa19.25■□□□□ 0.67
SHANK2-217ENST00000498519 NHSQ6T4R5 1651 aa19.25■□□□□ 0.67
SHANK2-217ENST00000498519 POLD1P28340 1107 aa19.25■□□□□ 0.67
SHANK2-217ENST00000498519 DDX54Q8TDD1 881 aaKnown RBP19.25■□□□□ 0.67
SHANK2-217ENST00000498519 USP54Q70EL1 1684 aa19.24■□□□□ 0.67
SHANK2-217ENST00000498519 AMPHP49418 695 aa19.23■□□□□ 0.67
SHANK2-217ENST00000498519 ZNF784Q8NCA9 323 aaPredicted RBP19.23■□□□□ 0.67
SHANK2-217ENST00000498519 LTV1Q96GA3 475 aaPredicted RBP19.22■□□□□ 0.67
SHANK2-217ENST00000498519 MYOM1P52179 1685 aa19.21■□□□□ 0.67
SHANK2-217ENST00000498519 ZNF827Q17R98 1081 aa19.21■□□□□ 0.67
SHANK2-217ENST00000498519 AKT1S1Q96B36 256 aa19.21■□□□□ 0.67
SHANK2-217ENST00000498519 SYTL4Q96C24 671 aaPredicted RBP19.21■□□□□ 0.67
SHANK2-217ENST00000498519 LRRC4BQ9NT99 713 aa19.21■□□□□ 0.67
SHANK2-217ENST00000498519 TFCP2L1Q9NZI6 479 aa19.21■□□□□ 0.67
SHANK2-217ENST00000498519 RGPD5Q99666 1765 aa19.2■□□□□ 0.66
SHANK2-217ENST00000498519 CGNL1Q0VF96 1302 aa19.2■□□□□ 0.66
SHANK2-217ENST00000498519 ANKRD36BQ8N2N9 1353 aa19.19■□□□□ 0.66
SHANK2-217ENST00000498519 HOXC9P31274 260 aa19.19■□□□□ 0.66
SHANK2-217ENST00000498519 GPR162Q16538 588 aa19.19■□□□□ 0.66
SHANK2-217ENST00000498519 ZCRB1Q8TBF4 217 aaKnown RBP19.19■□□□□ 0.66
SHANK2-217ENST00000498519 MAP3K19Q56UN5 1328 aa19.19■□□□□ 0.66
SHANK2-217ENST00000498519 PRIM1P49642 420 aaKnown RBP19.18■□□□□ 0.66
SHANK2-217ENST00000498519 ST20-MTHFSA0A0A6YYL1 179 aa19.17■□□□□ 0.66
SHANK2-217ENST00000498519 RTL1A6NKG5 1358 aa19.17■□□□□ 0.66
SHANK2-217ENST00000498519 PAPPAQ13219 1627 aa19.16■□□□□ 0.66
SHANK2-217ENST00000498519 TESK2Q96S53 571 aa19.16■□□□□ 0.66
SHANK2-217ENST00000498519 SMG6Q86US8 1419 aaKnown RBP19.15■□□□□ 0.66
SHANK2-217ENST00000498519 KLHL34Q8N239 644 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms