RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 ZSCAN26Q16670 478 aa13.99□□□□□ -0.17
PBX1-211ENST00000498497 KIF27Q86VH2 1401 aa13.99□□□□□ -0.17
PBX1-211ENST00000498497 PCF11O94913 1555 aaKnown RBP13.98□□□□□ -0.17
PBX1-211ENST00000498497 ERCC6LQ2NKX8 1250 aa13.98□□□□□ -0.17
PBX1-211ENST00000498497 BMS1Q14692 1282 aaKnown RBP13.98□□□□□ -0.17
PBX1-211ENST00000498497 ZNF397Q8NF99 534 aaPredicted RBP13.98□□□□□ -0.17
PBX1-211ENST00000498497 CUX1P39880 1505 aa13.98□□□□□ -0.17
PBX1-211ENST00000498497 CCDC172P0C7W6 258 aa13.97□□□□□ -0.17
PBX1-211ENST00000498497 ZNF521Q96K83 1311 aa13.97□□□□□ -0.17
PBX1-211ENST00000498497 IRF6O14896 467 aa13.97□□□□□ -0.17
PBX1-211ENST00000498497 SEC31AO94979 1220 aaKnown RBP13.97□□□□□ -0.17
PBX1-211ENST00000498497 MVPQ14764 893 aaKnown RBP13.97□□□□□ -0.17
PBX1-211ENST00000498497 CAMK4Q16566 473 aa13.97□□□□□ -0.17
PBX1-211ENST00000498497 DZIP1LQ8IYY4 767 aaKnown RBP13.97□□□□□ -0.17
PBX1-211ENST00000498497 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.97□□□□□ -0.17
PBX1-211ENST00000498497 SYAP1Q96A49 352 aaPredicted RBP13.97□□□□□ -0.17
PBX1-211ENST00000498497 DEF6Q9H4E7 631 aa13.97□□□□□ -0.17
PBX1-211ENST00000498497 USP27XA6NNY8 438 aa13.97□□□□□ -0.17
PBX1-211ENST00000498497 RNF217Q8TC41 542 aa13.97□□□□□ -0.17
PBX1-211ENST00000498497 LRRN4CLQ8ND94 238 aa13.96□□□□□ -0.17
PBX1-211ENST00000498497 CARD10Q9BWT7 1032 aa13.96□□□□□ -0.17
PBX1-211ENST00000498497 EPC1Q9H2F5 836 aa13.96□□□□□ -0.17
PBX1-211ENST00000498497 ARID5BQ14865 1188 aa13.96□□□□□ -0.18
PBX1-211ENST00000498497 SLC26A8Q96RN1 970 aa13.96□□□□□ -0.18
PBX1-211ENST00000498497 KDM4AO75164 1064 aa13.95□□□□□ -0.18
PBX1-211ENST00000498497 MBD3O95983 291 aa13.95□□□□□ -0.18
PBX1-211ENST00000498497 BRPF1P55201 1214 aaPredicted RBP13.95□□□□□ -0.18
PBX1-211ENST00000498497 AXDND1Q5T1B0 1012 aaPredicted RBP13.95□□□□□ -0.18
PBX1-211ENST00000498497 USP48Q86UV5 1035 aa13.95□□□□□ -0.18
PBX1-211ENST00000498497 PACS2Q86VP3 889 aa13.95□□□□□ -0.18
PBX1-211ENST00000498497 FBXW7Q969H0 707 aa13.95□□□□□ -0.18
PBX1-211ENST00000498497 YY1AP1Q9H869 796 aa13.95□□□□□ -0.18
PBX1-211ENST00000498497 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.95□□□□□ -0.18
PBX1-211ENST00000498497 SMTNL1A8MU46 457 aa13.95□□□□□ -0.18
PBX1-211ENST00000498497 DHX8Q14562 1220 aaKnown RBP13.95□□□□□ -0.18
PBX1-211ENST00000498497 TTC31Q49AM3 519 aaPredicted RBP13.95□□□□□ -0.18
PBX1-211ENST00000498497 CEP135Q66GS9 1140 aa13.95□□□□□ -0.18
PBX1-211ENST00000498497 VIRMAQ69YN4 1812 aaKnown RBP13.95□□□□□ -0.18
PBX1-211ENST00000498497 RRP15Q9Y3B9 282 aaKnown RBP13.95□□□□□ -0.18
PBX1-211ENST00000498497 GOLGA6L1Q8N7Z2 621 aa13.94□□□□□ -0.18
PBX1-211ENST00000498497 SUFUQ9UMX1 484 aa13.94□□□□□ -0.18
PBX1-211ENST00000498497 TEX35Q5T0J7 233 aa13.94□□□□□ -0.18
PBX1-211ENST00000498497 LUZP1Q86V48 1076 aa13.94□□□□□ -0.18
PBX1-211ENST00000498497 CFAP44Q96MT7 982 aa13.94□□□□□ -0.18
PBX1-211ENST00000498497 TRIM5Q9C035 493 aa13.94□□□□□ -0.18
PBX1-211ENST00000498497 ABCA5Q8WWZ7 1642 aa13.94□□□□□ -0.18
PBX1-211ENST00000498497 NEK4P51957 841 aa13.93□□□□□ -0.18
PBX1-211ENST00000498497 CHD1LQ86WJ1 897 aa13.93□□□□□ -0.18
PBX1-211ENST00000498497 EGFL6Q8IUX8 553 aa13.93□□□□□ -0.18
PBX1-211ENST00000498497 CAMSAP2Q08AD1 1489 aa13.93□□□□□ -0.18
PBX1-211ENST00000498497 DISP3Q9P2K9 1392 aa13.93□□□□□ -0.18
PBX1-211ENST00000498497 GUCY2CP25092 1073 aa13.93□□□□□ -0.18
PBX1-211ENST00000498497 CXorf56Q9H5V9 222 aa13.93□□□□□ -0.18
PBX1-211ENST00000498497 FOXR1Q6PIV2 292 aa13.93□□□□□ -0.18
PBX1-211ENST00000498497 SLC24A3Q9HC58 644 aa13.93□□□□□ -0.18
PBX1-211ENST00000498497 CNPY2Q9Y2B0 182 aa13.93□□□□□ -0.18
PBX1-211ENST00000498497 ZKSCAN2Q63HK3 967 aa13.92□□□□□ -0.18
PBX1-211ENST00000498497 CARMIL1Q5VZK9 1371 aa13.92□□□□□ -0.18
PBX1-211ENST00000498497 BIRC2Q13490 618 aa13.92□□□□□ -0.18
PBX1-211ENST00000498497 CWC27Q6UX04 472 aaKnown RBP13.92□□□□□ -0.18
PBX1-211ENST00000498497 CKAP2LQ8IYA6 745 aa13.92□□□□□ -0.18
PBX1-211ENST00000498497 CALR3Q96L12 384 aaKnown RBP13.92□□□□□ -0.18
PBX1-211ENST00000498497 SEMA3FQ13275 785 aa13.91□□□□□ -0.18
PBX1-211ENST00000498497 ISM2Q6H9L7 571 aa13.91□□□□□ -0.18
PBX1-211ENST00000498497 FILIP1Q7Z7B0 1213 aa13.91□□□□□ -0.18
PBX1-211ENST00000498497 TMEM57Q8N5G2 664 aa13.91□□□□□ -0.18
PBX1-211ENST00000498497 PHF14O94880 888 aa13.91□□□□□ -0.18
PBX1-211ENST00000498497 CADPSQ9ULU8 1353 aa13.91□□□□□ -0.18
PBX1-211ENST00000498497 ST18O60284 1047 aa13.9□□□□□ -0.18
PBX1-211ENST00000498497 TRIM27P14373 513 aa13.9□□□□□ -0.18
PBX1-211ENST00000498497 UPF3BQ9BZI7 483 aaKnown RBP13.9□□□□□ -0.18
PBX1-211ENST00000498497 PLPPR3Q6T4P5 718 aa13.9□□□□□ -0.18
PBX1-211ENST00000498497 PDRG1Q9NUG6 133 aa13.9□□□□□ -0.18
PBX1-211ENST00000498497 GNL2Q13823 731 aaKnown RBP13.9□□□□□ -0.18
PBX1-211ENST00000498497 ARHGAP29Q52LW3 1261 aa13.9□□□□□ -0.18
PBX1-211ENST00000498497 C16orf71Q8IYS4 520 aaPredicted RBP13.89□□□□□ -0.19
PBX1-211ENST00000498497 CCAR2Q8N163 923 aaKnown RBP13.89□□□□□ -0.19
PBX1-211ENST00000498497 CYP2E1P05181 493 aaPredicted RBP13.89□□□□□ -0.19
PBX1-211ENST00000498497 CLCN6P51797 869 aa13.89□□□□□ -0.19
PBX1-211ENST00000498497 CDCA8Q53HL2 280 aa13.89□□□□□ -0.19
PBX1-211ENST00000498497 RABEP2Q9H5N1 569 aa13.89□□□□□ -0.19
PBX1-211ENST00000498497 PNMA6AP0CW24 399 aaPredicted RBP13.88□□□□□ -0.19
PBX1-211ENST00000498497 RABEP1Q15276 862 aa13.88□□□□□ -0.19
PBX1-211ENST00000498497 FAM177A1Q8N128 213 aaPredicted RBP13.88□□□□□ -0.19
PBX1-211ENST00000498497 OAS2P29728 719 aaKnown RBP13.88□□□□□ -0.19
PBX1-211ENST00000498497 TTC19Q6DKK2 380 aaPredicted RBP13.88□□□□□ -0.19
PBX1-211ENST00000498497 HMGXB3Q12766 1538 aa13.88□□□□□ -0.19
PBX1-211ENST00000498497 A0A1B0GUL7 405 aa13.88□□□□□ -0.19
PBX1-211ENST00000498497 PLA2G4AP47712 749 aa13.88□□□□□ -0.19
PBX1-211ENST00000498497 MNAT1P51948 309 aa13.88□□□□□ -0.19
PBX1-211ENST00000498497 TRMT2AQ8IZ69 625 aaKnown RBP13.88□□□□□ -0.19
PBX1-211ENST00000498497 SGSM3Q96HU1 749 aa13.88□□□□□ -0.19
PBX1-211ENST00000498497 ELL2O00472 640 aaPredicted RBP13.87□□□□□ -0.19
PBX1-211ENST00000498497 OS9Q13438 667 aaPredicted RBP13.87□□□□□ -0.19
PBX1-211ENST00000498497 PTPN14Q15678 1187 aa13.87□□□□□ -0.19
PBX1-211ENST00000498497 SRLQ86TD4 932 aa13.87□□□□□ -0.19
PBX1-211ENST00000498497 USP26Q9BXU7 913 aa13.87□□□□□ -0.19
PBX1-211ENST00000498497 NOB1Q9ULX3 412 aaKnown RBP13.87□□□□□ -0.19
PBX1-211ENST00000498497 PHACTR2O75167 634 aa13.87□□□□□ -0.19
PBX1-211ENST00000498497 TXLNBQ8N3L3 684 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms