RNA–Protein interactions for RNA: ENST00000498450.1

TFAP2A-219, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 5

Gene TFAP2A, Length 417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-219ENST00000498450 STK26Q9P289 416 aa13.69□□□□□ -0.22
TFAP2A-219ENST00000498450 USP35Q9P2H5 1018 aa13.69□□□□□ -0.22
TFAP2A-219ENST00000498450 YTHDC2Q9H6S0 1430 aaKnown RBP13.69□□□□□ -0.22
TFAP2A-219ENST00000498450 TXNRD1Q16881 649 aa13.68□□□□□ -0.22
TFAP2A-219ENST00000498450 COL13A1Q5TAT6 717 aaPredicted RBP13.68□□□□□ -0.22
TFAP2A-219ENST00000498450 CPDO75976 1380 aa13.67□□□□□ -0.22
TFAP2A-219ENST00000498450 ANKRD30BQ9BXX2 1392 aa13.67□□□□□ -0.22
TFAP2A-219ENST00000498450 TNS4Q8IZW8 715 aa13.66□□□□□ -0.22
TFAP2A-219ENST00000498450 JMYQ8N9B5 988 aa13.66□□□□□ -0.22
TFAP2A-219ENST00000498450 PMFBP1Q8TBY8 1022 aa13.66□□□□□ -0.22
TFAP2A-219ENST00000498450 COL24A1Q17RW2 1714 aa13.66□□□□□ -0.22
TFAP2A-219ENST00000498450 LARP1Q6PKG0 1096 aaKnown RBP13.65□□□□□ -0.22
TFAP2A-219ENST00000498450 POLD1P28340 1107 aa13.64□□□□□ -0.23
TFAP2A-219ENST00000498450 CHRNA2Q15822 529 aa13.64□□□□□ -0.23
TFAP2A-219ENST00000498450 CDCA7Q9BWT1 371 aaPredicted RBP13.64□□□□□ -0.23
TFAP2A-219ENST00000498450 PIK3C2GO75747 1445 aa13.64□□□□□ -0.23
TFAP2A-219ENST00000498450 LMO7Q8WWI1 1683 aa13.63□□□□□ -0.23
TFAP2A-219ENST00000498450 DDB1Q16531 1140 aa13.63□□□□□ -0.23
TFAP2A-219ENST00000498450 PHRF1Q9P1Y6 1649 aaKnown RBP13.63□□□□□ -0.23
TFAP2A-219ENST00000498450 CRB1P82279 1406 aa13.63□□□□□ -0.23
TFAP2A-219ENST00000498450 ADGRF5Q8IZF2 1346 aa13.63□□□□□ -0.23
TFAP2A-219ENST00000498450 PAPPAQ13219 1627 aa13.61□□□□□ -0.23
TFAP2A-219ENST00000498450 LRRC37A3O60309 1634 aa13.61□□□□□ -0.23
TFAP2A-219ENST00000498450 YBX3P16989 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
TFAP2A-219ENST00000498450 TMEM132EQ6IEE7 984 aa13.6□□□□□ -0.23
TFAP2A-219ENST00000498450 PELP1Q8IZL8 1130 aaKnown RBP13.6□□□□□ -0.23
TFAP2A-219ENST00000498450 BRD4O60885 1362 aaPredicted RBP13.59□□□□□ -0.23
TFAP2A-219ENST00000498450 KIF3CO14782 793 aa13.59□□□□□ -0.23
TFAP2A-219ENST00000498450 ZC3H6P61129 1189 aaKnown RBP13.59□□□□□ -0.23
TFAP2A-219ENST00000498450 COL5A2P05997 1499 aaPredicted RBP13.59□□□□□ -0.23
TFAP2A-219ENST00000498450 TULP4Q9NRJ4 1543 aa13.59□□□□□ -0.23
TFAP2A-219ENST00000498450 SPDYE2BA6NHP3 402 aa13.58□□□□□ -0.24
TFAP2A-219ENST00000498450 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
TFAP2A-219ENST00000498450 TOMM70O94826 608 aa13.58□□□□□ -0.24
TFAP2A-219ENST00000498450 SPDYE6P0CI01 402 aa13.58□□□□□ -0.24
TFAP2A-219ENST00000498450 SPDYE2Q495Y8 402 aa13.58□□□□□ -0.24
TFAP2A-219ENST00000498450 PTF1AQ7RTS3 328 aa13.58□□□□□ -0.24
TFAP2A-219ENST00000498450 KLRG1Q96E93 195 aa13.58□□□□□ -0.24
TFAP2A-219ENST00000498450 QSER1Q2KHR3 1735 aa13.57□□□□□ -0.24
TFAP2A-219ENST00000498450 NGDNQ8NEJ9 315 aaKnown RBP13.57□□□□□ -0.24
TFAP2A-219ENST00000498450 ZNF692Q9BU19 519 aaPredicted RBP13.57□□□□□ -0.24
TFAP2A-219ENST00000498450 TOPAZ1Q8N9V7 1692 aa13.56□□□□□ -0.24
TFAP2A-219ENST00000498450 MARCH10Q8NA82 808 aaPredicted RBP13.56□□□□□ -0.24
TFAP2A-219ENST00000498450 NLGN2Q8NFZ4 835 aa13.56□□□□□ -0.24
TFAP2A-219ENST00000498450 PRAM1Q96QH2 718 aa13.56□□□□□ -0.24
TFAP2A-219ENST00000498450 C14orf93Q9H972 538 aaKnown RBP13.56□□□□□ -0.24
TFAP2A-219ENST00000498450 USP19O94966 1318 aa13.55□□□□□ -0.24
TFAP2A-219ENST00000498450 SPATA31E1Q6ZUB1 1445 aa13.55□□□□□ -0.24
TFAP2A-219ENST00000498450 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
TFAP2A-219ENST00000498450 PRR36Q9H6K5 1346 aa13.54□□□□□ -0.24
TFAP2A-219ENST00000498450 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
TFAP2A-219ENST00000498450 AKAP12Q02952 1782 aa13.53□□□□□ -0.24
TFAP2A-219ENST00000498450 WWC3Q9ULE0 1092 aa13.52□□□□□ -0.25
TFAP2A-219ENST00000498450 WDR90Q96KV7 1748 aa13.52□□□□□ -0.25
TFAP2A-219ENST00000498450 PCNTO95613 3336 aa13.52□□□□□ -0.25
TFAP2A-219ENST00000498450 WASLO00401 505 aaPredicted RBP13.51□□□□□ -0.25
TFAP2A-219ENST00000498450 AKT1S1Q96B36 256 aa13.51□□□□□ -0.25
TFAP2A-219ENST00000498450 POGKQ9P215 609 aa13.51□□□□□ -0.25
TFAP2A-219ENST00000498450 CD2APQ9Y5K6 639 aa13.51□□□□□ -0.25
TFAP2A-219ENST00000498450 ARHGEF28Q8N1W1 1705 aaKnown RBP13.5□□□□□ -0.25
TFAP2A-219ENST00000498450 POLR3AO14802 1390 aaPredicted RBP13.5□□□□□ -0.25
TFAP2A-219ENST00000498450 ZNF827Q17R98 1081 aa13.5□□□□□ -0.25
TFAP2A-219ENST00000498450 SLC27A3Q5K4L6 730 aa13.5□□□□□ -0.25
TFAP2A-219ENST00000498450 ITSN1Q15811 1721 aa13.5□□□□□ -0.25
TFAP2A-219ENST00000498450 NHSQ6T4R5 1651 aa13.5□□□□□ -0.25
TFAP2A-219ENST00000498450 ZNF526Q8TF50 670 aaPredicted RBP13.49□□□□□ -0.25
TFAP2A-219ENST00000498450 WNK3Q9BYP7 1800 aa13.48□□□□□ -0.25
TFAP2A-219ENST00000498450 PNPLA7Q6ZV29 1317 aa13.48□□□□□ -0.25
TFAP2A-219ENST00000498450 GCP02774 474 aa13.48□□□□□ -0.25
TFAP2A-219ENST00000498450 RBM46Q8TBY0 533 aaKnown RBP13.48□□□□□ -0.25
TFAP2A-219ENST00000498450 FSTL1Q12841 308 aa13.47□□□□□ -0.25
TFAP2A-219ENST00000498450 SAFB2Q14151 953 aaKnown RBP eCLIP13.47□□□□□ -0.25
TFAP2A-219ENST00000498450 NLRP13Q86W25 1043 aa13.47□□□□□ -0.25
TFAP2A-219ENST00000498450 WDR17Q8IZU2 1322 aa13.46□□□□□ -0.25
TFAP2A-219ENST00000498450 EXOC5O00471 708 aa13.46□□□□□ -0.25
TFAP2A-219ENST00000498450 TOM1L2Q6ZVM7 507 aa13.46□□□□□ -0.25
TFAP2A-219ENST00000498450 ABTB2Q8N961 1025 aa13.45□□□□□ -0.26
TFAP2A-219ENST00000498450 CARD10Q9BWT7 1032 aa13.44□□□□□ -0.26
TFAP2A-219ENST00000498450 LRRC4BQ9NT99 713 aa13.44□□□□□ -0.26
TFAP2A-219ENST00000498450 TNS2Q63HR2 1409 aa13.44□□□□□ -0.26
TFAP2A-219ENST00000498450 TRPM1Q7Z4N2 1603 aa13.43□□□□□ -0.26
TFAP2A-219ENST00000498450 USP6P35125 1406 aa13.43□□□□□ -0.26
TFAP2A-219ENST00000498450 RGL3Q3MIN7 710 aa13.43□□□□□ -0.26
TFAP2A-219ENST00000498450 CICQ96RK0 1608 aaPredicted RBP13.42□□□□□ -0.26
TFAP2A-219ENST00000498450 PLEKHG3A1L390 1219 aa13.42□□□□□ -0.26
TFAP2A-219ENST00000498450 HMGB2P26583 209 aaKnown RBP13.42□□□□□ -0.26
TFAP2A-219ENST00000498450 TFCP2L1Q9NZI6 479 aa13.42□□□□□ -0.26
TFAP2A-219ENST00000498450 ABCC6O95255 1503 aa13.42□□□□□ -0.26
TFAP2A-219ENST00000498450 CCDC7Q96M83 1385 aa13.42□□□□□ -0.26
TFAP2A-219ENST00000498450 CFAP70Q5T0N1 1121 aa13.41□□□□□ -0.26
TFAP2A-219ENST00000498450 NUTM2GQ5VZR2 741 aa13.41□□□□□ -0.26
TFAP2A-219ENST00000498450 NUDT16Q96DE0 195 aaKnown RBP13.41□□□□□ -0.26
TFAP2A-219ENST00000498450 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
TFAP2A-219ENST00000498450 HIRIP3Q9BW71 556 aaPredicted RBP13.41□□□□□ -0.26
TFAP2A-219ENST00000498450 ADGRB1O14514 1584 aa13.41□□□□□ -0.26
TFAP2A-219ENST00000498450 MINK1Q8N4C8 1332 aaPredicted RBP13.39□□□□□ -0.27
TFAP2A-219ENST00000498450 C10orf71Q711Q0 1435 aa13.39□□□□□ -0.27
TFAP2A-219ENST00000498450 CCDC61Q9Y6R9 512 aa13.39□□□□□ -0.27
TFAP2A-219ENST00000498450 BTAF1O14981 1849 aa13.39□□□□□ -0.27
TFAP2A-219ENST00000498450 ACEP12821 1306 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms