RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 KCNB2Q92953 911 aa9.49□□□□□ -0.89
PDCD4-211ENST00000498367 GLMNQ92990 594 aa9.49□□□□□ -0.89
PDCD4-211ENST00000498367 CCDC85AQ96PX6 553 aaPredicted RBP9.49□□□□□ -0.89
PDCD4-211ENST00000498367 ANP32EQ9BTT0 268 aa9.49□□□□□ -0.89
PDCD4-211ENST00000498367 TMUB1Q9BVT8 246 aa9.49□□□□□ -0.89
PDCD4-211ENST00000498367 PRR14Q9BWN1 585 aa9.49□□□□□ -0.89
PDCD4-211ENST00000498367 MAF1Q9H063 256 aa9.49□□□□□ -0.89
PDCD4-211ENST00000498367 TMEM134Q9H6X4 195 aa9.49□□□□□ -0.89
PDCD4-211ENST00000498367 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.49□□□□□ -0.89
PDCD4-211ENST00000498367 CCER2I3L3R5 266 aa9.48□□□□□ -0.89
PDCD4-211ENST00000498367 SLC4A3P48751 1232 aa9.48□□□□□ -0.89
PDCD4-211ENST00000498367 CASC1Q6TDU7 716 aa9.48□□□□□ -0.89
PDCD4-211ENST00000498367 ZNF622Q969S3 477 aaKnown RBP eCLIP9.48□□□□□ -0.893e-6■□□□□ 8.1
PDCD4-211ENST00000498367 BRINP2Q9C0B6 783 aa9.48□□□□□ -0.89
PDCD4-211ENST00000498367 FAN1Q9Y2M0 1017 aa9.48□□□□□ -0.89
PDCD4-211ENST00000498367 U2SURPO15042 1029 aaKnown RBP9.47□□□□□ -0.89
PDCD4-211ENST00000498367 NRDCO43847 1150 aa9.47□□□□□ -0.89
PDCD4-211ENST00000498367 ZRANB2O95218 330 aaKnown RBP eCLIP9.47□□□□□ -0.89
PDCD4-211ENST00000498367 FOXD4Q12950 439 aaPredicted RBP9.47□□□□□ -0.89
PDCD4-211ENST00000498367 TTLL12Q14166 644 aaPredicted RBP9.47□□□□□ -0.89
PDCD4-211ENST00000498367 DNAJC14Q6Y2X3 702 aaPredicted RBP9.47□□□□□ -0.89
PDCD4-211ENST00000498367 LARGE2Q8N3Y3 721 aa9.47□□□□□ -0.89
PDCD4-211ENST00000498367 ATP1B4Q9UN42 357 aaPredicted RBP9.47□□□□□ -0.89
PDCD4-211ENST00000498367 MAP2K5Q13163 448 aa9.46□□□□□ -0.9
PDCD4-211ENST00000498367 BANK1Q8NDB2 785 aa9.46□□□□□ -0.9
PDCD4-211ENST00000498367 PRM3Q9NNZ6 103 aa9.46□□□□□ -0.9
PDCD4-211ENST00000498367 PCDHB3Q9Y5E6 796 aa9.46□□□□□ -0.9
PDCD4-211ENST00000498367 PARNO95453 639 aaKnown RBP9.45□□□□□ -0.9
PDCD4-211ENST00000498367 GGCXP38435 758 aa9.45□□□□□ -0.9
PDCD4-211ENST00000498367 CNGB1Q14028 1251 aaPredicted RBP9.45□□□□□ -0.9
PDCD4-211ENST00000498367 BLOC1S3Q6QNY0 202 aa9.45□□□□□ -0.9
PDCD4-211ENST00000498367 CLEC4GQ6UXB4 293 aa9.45□□□□□ -0.9
PDCD4-211ENST00000498367 CACTIN-AS1Q8N1I8 211 aa9.45□□□□□ -0.9
PDCD4-211ENST00000498367 PMM1Q92871 262 aa9.45□□□□□ -0.9
PDCD4-211ENST00000498367 CCDC102AQ96A19 550 aa9.45□□□□□ -0.9
PDCD4-211ENST00000498367 EMID1Q96A84 441 aaPredicted RBP9.45□□□□□ -0.9
PDCD4-211ENST00000498367 NOP58Q9Y2X3 529 aaKnown RBP9.45□□□□□ -0.9
PDCD4-211ENST00000498367 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.44□□□□□ -0.9
PDCD4-211ENST00000498367 RCCD1A6NED2 376 aa9.44□□□□□ -0.9
PDCD4-211ENST00000498367 MARSP56192 900 aaKnown RBP9.44□□□□□ -0.9
PDCD4-211ENST00000498367 SDE2Q6IQ49 451 aa9.44□□□□□ -0.9
PDCD4-211ENST00000498367 SDR16C5Q8N3Y7 309 aa9.44□□□□□ -0.9
PDCD4-211ENST00000498367 CXorf38Q8TB03 319 aa9.44□□□□□ -0.9
PDCD4-211ENST00000498367 TBC1D2Q9BYX2 928 aa9.44□□□□□ -0.9
PDCD4-211ENST00000498367 PAX3P23760 479 aa9.43□□□□□ -0.9
PDCD4-211ENST00000498367 FAM161AQ3B820 660 aa9.43□□□□□ -0.9
PDCD4-211ENST00000498367 EGFLAMQ63HQ2 1017 aa9.43□□□□□ -0.9
PDCD4-211ENST00000498367 CHPF2Q9P2E5 772 aa9.43□□□□□ -0.9
PDCD4-211ENST00000498367 PNMA2Q9UL42 364 aa9.43□□□□□ -0.9
PDCD4-211ENST00000498367 RNF223E7ERA6 249 aa9.42□□□□□ -0.9
PDCD4-211ENST00000498367 ACTN4O43707 911 aaKnown RBP9.42□□□□□ -0.9
PDCD4-211ENST00000498367 C4orf46Q504U0 113 aa9.42□□□□□ -0.9
PDCD4-211ENST00000498367 GPATCH3Q96I76 525 aa9.42□□□□□ -0.9
PDCD4-211ENST00000498367 BSDC1Q9NW68 430 aaPredicted RBP9.42□□□□□ -0.9
PDCD4-211ENST00000498367 NUTM2FA1L443 756 aa9.41□□□□□ -0.9
PDCD4-211ENST00000498367 IRF6O14896 467 aa9.41□□□□□ -0.9
PDCD4-211ENST00000498367 TLL1O43897 1013 aa9.41□□□□□ -0.9
PDCD4-211ENST00000498367 FCHSD2O94868 740 aa9.41□□□□□ -0.9
PDCD4-211ENST00000498367 RFX1P22670 979 aa9.41□□□□□ -0.9
PDCD4-211ENST00000498367 ERCC5P28715 1186 aaPredicted RBP9.41□□□□□ -0.9
PDCD4-211ENST00000498367 PSME1Q06323 249 aa9.41□□□□□ -0.9
PDCD4-211ENST00000498367 AMOTL1Q8IY63 956 aa9.41□□□□□ -0.9
PDCD4-211ENST00000498367 SENP7Q9BQF6 1050 aa9.41□□□□□ -0.9
PDCD4-211ENST00000498367 SWAP70Q9UH65 585 aa9.41□□□□□ -0.9
PDCD4-211ENST00000498367 PDZRN3Q9UPQ7 1066 aa9.41□□□□□ -0.9
PDCD4-211ENST00000498367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.4□□□□□ -0.9
PDCD4-211ENST00000498367 WDHD1O75717 1129 aaPredicted RBP9.4□□□□□ -0.9
PDCD4-211ENST00000498367 SLC10A3P09131 477 aa9.4□□□□□ -0.9
PDCD4-211ENST00000498367 RNF187Q5TA31 235 aaPredicted RBP9.4□□□□□ -0.9
PDCD4-211ENST00000498367 TRIM67Q6ZTA4 783 aa9.4□□□□□ -0.9
PDCD4-211ENST00000498367 SCYL1Q96KG9 808 aa9.4□□□□□ -0.9
PDCD4-211ENST00000498367 LNPKQ9C0E8 428 aa9.4□□□□□ -0.9
PDCD4-211ENST00000498367 WWC3Q9ULE0 1092 aa9.4□□□□□ -0.9
PDCD4-211ENST00000498367 TTC36A6NLP5 189 aa9.39□□□□□ -0.91
PDCD4-211ENST00000498367 CFHP08603 1231 aa9.39□□□□□ -0.91
PDCD4-211ENST00000498367 VTI1AQ96AJ9 217 aa9.39□□□□□ -0.91
PDCD4-211ENST00000498367 EVI5LQ96CN4 794 aa9.39□□□□□ -0.91
PDCD4-211ENST00000498367 SPACA7Q96KW9 195 aa9.39□□□□□ -0.91
PDCD4-211ENST00000498367 TRIM34Q9BYJ4 488 aa9.39□□□□□ -0.91
PDCD4-211ENST00000498367 TANGO6Q9C0B7 1094 aa9.39□□□□□ -0.91
PDCD4-211ENST00000498367 KCNG1Q9UIX4 513 aa9.39□□□□□ -0.91
PDCD4-211ENST00000498367 RPS6KL1Q9Y6S9 549 aa9.39□□□□□ -0.91
PDCD4-211ENST00000498367 KIF4AO95239 1232 aa9.38□□□□□ -0.91
PDCD4-211ENST00000498367 COPB2P35606 906 aa9.38□□□□□ -0.91
PDCD4-211ENST00000498367 BIRC2Q13490 618 aa9.38□□□□□ -0.91
PDCD4-211ENST00000498367 KMT5BQ4FZB7 885 aa9.38□□□□□ -0.91
PDCD4-211ENST00000498367 ZNF280DQ6N043 979 aa9.38□□□□□ -0.91
PDCD4-211ENST00000498367 NPAS4Q8IUM7 802 aa9.38□□□□□ -0.91
PDCD4-211ENST00000498367 CCDC146Q8IYE0 955 aa9.38□□□□□ -0.91
PDCD4-211ENST00000498367 PXYLP1Q8TE99 480 aa9.38□□□□□ -0.91
PDCD4-211ENST00000498367 GNL3LQ9NVN8 582 aaKnown RBP9.38□□□□□ -0.91
PDCD4-211ENST00000498367 NUB1Q9Y5A7 615 aa9.38□□□□□ -0.91
PDCD4-211ENST00000498367 CARNS1A5YM72 827 aa9.37□□□□□ -0.91
PDCD4-211ENST00000498367 XPCQ01831 940 aaPredicted RBP9.37□□□□□ -0.91
PDCD4-211ENST00000498367 AXDND1Q5T1B0 1012 aaPredicted RBP9.37□□□□□ -0.91
PDCD4-211ENST00000498367 ANKLE1Q8NAG6 615 aa9.37□□□□□ -0.91
PDCD4-211ENST00000498367 DEKP35659 375 aaKnown RBP9.36□□□□□ -0.91
PDCD4-211ENST00000498367 SLC19A1P41440 591 aa9.36□□□□□ -0.91
PDCD4-211ENST00000498367 SRPK2P78362 688 aaKnown RBP9.36□□□□□ -0.91
PDCD4-211ENST00000498367 NBPF11Q86T75 865 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms