RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 SLC24A1O60721 1099 aa11.95□□□□□ -0.5
HMGXB4-207ENST00000498212 BARGINQ6ZT62 677 aa11.95□□□□□ -0.5
HMGXB4-207ENST00000498212 HDGFL2Q7Z4V5 671 aaPredicted RBP11.95□□□□□ -0.5
HMGXB4-207ENST00000498212 PCGF6Q9BYE7 350 aa11.95□□□□□ -0.5
HMGXB4-207ENST00000498212 SLC12A5Q9H2X9 1139 aa11.95□□□□□ -0.5
HMGXB4-207ENST00000498212 CRB1P82279 1406 aa11.94□□□□□ -0.5
HMGXB4-207ENST00000498212 CLSPNQ9HAW4 1339 aa11.94□□□□□ -0.5
HMGXB4-207ENST00000498212 FAM182BQ5T319 152 aa11.94□□□□□ -0.5
HMGXB4-207ENST00000498212 DEFB132Q7Z7B7 95 aa11.94□□□□□ -0.5
HMGXB4-207ENST00000498212 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.94□□□□□ -0.5
HMGXB4-207ENST00000498212 TCP11L2Q8N4U5 519 aa11.94□□□□□ -0.5
HMGXB4-207ENST00000498212 TESK2Q96S53 571 aa11.94□□□□□ -0.5
HMGXB4-207ENST00000498212 THRAP3Q9Y2W1 955 aaKnown RBP11.94□□□□□ -0.5
HMGXB4-207ENST00000498212 ABCC6O95255 1503 aa11.94□□□□□ -0.5
HMGXB4-207ENST00000498212 EDC4Q6P2E9 1401 aaKnown RBP11.94□□□□□ -0.5
HMGXB4-207ENST00000498212 A0A1W2PP64 1363 aa11.93□□□□□ -0.5
HMGXB4-207ENST00000498212 LRRC37A3O60309 1634 aa11.93□□□□□ -0.5
HMGXB4-207ENST00000498212 NINLQ9Y2I6 1382 aa11.93□□□□□ -0.5
HMGXB4-207ENST00000498212 SOX12O15370 315 aa11.93□□□□□ -0.5
HMGXB4-207ENST00000498212 TERF2IPQ9NYB0 399 aa11.93□□□□□ -0.5
HMGXB4-207ENST00000498212 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
HMGXB4-207ENST00000498212 TIMELESSQ9UNS1 1208 aa11.93□□□□□ -0.5
HMGXB4-207ENST00000498212 SBF2Q86WG5 1849 aa11.93□□□□□ -0.5
HMGXB4-207ENST00000498212 USP31Q70CQ4 1352 aa11.92□□□□□ -0.5
HMGXB4-207ENST00000498212 USP47Q96K76 1375 aa11.92□□□□□ -0.5
HMGXB4-207ENST00000498212 ARHGEF25Q86VW2 580 aa11.92□□□□□ -0.5
HMGXB4-207ENST00000498212 BAG6P46379 1132 aa11.91□□□□□ -0.5
HMGXB4-207ENST00000498212 NME9Q86XW9 330 aa11.91□□□□□ -0.5
HMGXB4-207ENST00000498212 AXIN2Q9Y2T1 843 aa11.91□□□□□ -0.5
HMGXB4-207ENST00000498212 KIF20BQ96Q89 1820 aa11.9□□□□□ -0.5
HMGXB4-207ENST00000498212 WDR17Q8IZU2 1322 aa11.9□□□□□ -0.5
HMGXB4-207ENST00000498212 TMF1P82094 1093 aa11.9□□□□□ -0.5
HMGXB4-207ENST00000498212 PDE3BQ13370 1112 aa11.9□□□□□ -0.5
HMGXB4-207ENST00000498212 FAM196AQ6ZSG2 479 aa11.9□□□□□ -0.5
HMGXB4-207ENST00000498212 TOM1L2Q6ZVM7 507 aa11.9□□□□□ -0.5
HMGXB4-207ENST00000498212 PEAK1Q9H792 1746 aa11.89□□□□□ -0.51
HMGXB4-207ENST00000498212 OVOS2A0A0J9YW53 1432 aa11.89□□□□□ -0.51
HMGXB4-207ENST00000498212 OVOS2Q6IE36 1432 aa11.89□□□□□ -0.51
HMGXB4-207ENST00000498212 MYOM1P52179 1685 aa11.89□□□□□ -0.51
HMGXB4-207ENST00000498212 FAM208AQ9UK61 1670 aaKnown RBP11.88□□□□□ -0.51
HMGXB4-207ENST00000498212 DISP2A7MBM2 1401 aa11.88□□□□□ -0.51
HMGXB4-207ENST00000498212 CSB-PGBD3P0DP91 1061 aa11.88□□□□□ -0.51
HMGXB4-207ENST00000498212 RREB1Q92766 1687 aa11.87□□□□□ -0.51
HMGXB4-207ENST00000498212 TRIM37O94972 964 aa11.87□□□□□ -0.51
HMGXB4-207ENST00000498212 EN1Q05925 392 aaPredicted RBP11.87□□□□□ -0.51
HMGXB4-207ENST00000498212 ANKRD36BQ8N2N9 1353 aa11.87□□□□□ -0.51
HMGXB4-207ENST00000498212 CDCA8Q53HL2 280 aa11.86□□□□□ -0.51
HMGXB4-207ENST00000498212 CARD10Q9BWT7 1032 aa11.86□□□□□ -0.51
HMGXB4-207ENST00000498212 NUP188Q5SRE5 1749 aa11.86□□□□□ -0.51
HMGXB4-207ENST00000498212 OVOS2A0A0G2JMS6 1433 aa11.86□□□□□ -0.51
HMGXB4-207ENST00000498212 RGPD3A6NKT7 1758 aaPredicted RBP11.85□□□□□ -0.51
HMGXB4-207ENST00000498212 RGPD2P0DJD1 1756 aa11.85□□□□□ -0.51
HMGXB4-207ENST00000498212 RGPD4Q7Z3J3 1758 aa11.85□□□□□ -0.51
HMGXB4-207ENST00000498212 CCDC7Q96M83 1385 aa11.85□□□□□ -0.51
HMGXB4-207ENST00000498212 DDB1Q16531 1140 aa11.85□□□□□ -0.51
HMGXB4-207ENST00000498212 CCER1Q8TC90 406 aaPredicted RBP11.85□□□□□ -0.51
HMGXB4-207ENST00000498212 CDCA7Q9BWT1 371 aaPredicted RBP11.85□□□□□ -0.51
HMGXB4-207ENST00000498212 C11orf95C9JLR9 678 aaPredicted RBP11.84□□□□□ -0.51
HMGXB4-207ENST00000498212 APBA3O96018 575 aa11.84□□□□□ -0.51
HMGXB4-207ENST00000498212 COG3Q96JB2 828 aa11.84□□□□□ -0.51
HMGXB4-207ENST00000498212 ERBB3P21860 1342 aa11.84□□□□□ -0.51
HMGXB4-207ENST00000498212 EZH2Q15910 746 aaKnown RBP11.83□□□□□ -0.52
HMGXB4-207ENST00000498212 LRP5O75197 1615 aa11.82□□□□□ -0.52
HMGXB4-207ENST00000498212 PARD3Q8TEW0 1356 aa11.82□□□□□ -0.52
HMGXB4-207ENST00000498212 ANKRD24Q8TF21 1146 aa11.82□□□□□ -0.52
HMGXB4-207ENST00000498212 CAMKK2Q96RR4 588 aa11.82□□□□□ -0.52
HMGXB4-207ENST00000498212 U3KPZ7 1027 aaPredicted RBP11.82□□□□□ -0.52
HMGXB4-207ENST00000498212 TNS2Q63HR2 1409 aa11.81□□□□□ -0.52
HMGXB4-207ENST00000498212 IP6K1Q92551 441 aa11.81□□□□□ -0.52
HMGXB4-207ENST00000498212 NLRP2Q9NX02 1062 aa11.81□□□□□ -0.52
HMGXB4-207ENST00000498212 KAT6BQ8WYB5 2073 aa11.8□□□□□ -0.52
HMGXB4-207ENST00000498212 PSDA5PKW4 1024 aaPredicted RBP11.8□□□□□ -0.52
HMGXB4-207ENST00000498212 EXOC5O00471 708 aa11.8□□□□□ -0.52
HMGXB4-207ENST00000498212 FYB1O15117 783 aa11.8□□□□□ -0.52
HMGXB4-207ENST00000498212 MARCH10Q8NA82 808 aaPredicted RBP11.8□□□□□ -0.52
HMGXB4-207ENST00000498212 GGNBP2Q9H3C7 697 aa11.8□□□□□ -0.52
HMGXB4-207ENST00000498212 MAP2P11137 1827 aaKnown RBP11.8□□□□□ -0.52
HMGXB4-207ENST00000498212 NHSQ6T4R5 1651 aa11.8□□□□□ -0.52
HMGXB4-207ENST00000498212 MAP3K19Q56UN5 1328 aa11.8□□□□□ -0.52
HMGXB4-207ENST00000498212 ANKRD26Q9UPS8 1709 aa11.8□□□□□ -0.52
HMGXB4-207ENST00000498212 BCL9O00512 1426 aa11.79□□□□□ -0.52
HMGXB4-207ENST00000498212 NSD3Q9BZ95 1437 aa11.78□□□□□ -0.52
HMGXB4-207ENST00000498212 IL2RBP14784 551 aa11.78□□□□□ -0.52
HMGXB4-207ENST00000498212 FBLN1P23142 703 aa11.78□□□□□ -0.52
HMGXB4-207ENST00000498212 HOXC9P31274 260 aa11.78□□□□□ -0.52
HMGXB4-207ENST00000498212 AMPHP49418 695 aa11.78□□□□□ -0.52
HMGXB4-207ENST00000498212 RTL1A6NKG5 1358 aa11.78□□□□□ -0.52
HMGXB4-207ENST00000498212 SHANK3Q9BYB0 1731 aa11.77□□□□□ -0.52
HMGXB4-207ENST00000498212 EIF4G2P78344 907 aaKnown RBP eCLIP11.77□□□□□ -0.53
HMGXB4-207ENST00000498212 R3HDM1Q15032 1099 aaKnown RBP11.77□□□□□ -0.53
HMGXB4-207ENST00000498212 LTV1Q96GA3 475 aaPredicted RBP11.77□□□□□ -0.53
HMGXB4-207ENST00000498212 BCL11BQ9C0K0 894 aaPredicted RBP11.77□□□□□ -0.53
HMGXB4-207ENST00000498212 BTAF1O14981 1849 aa11.76□□□□□ -0.53
HMGXB4-207ENST00000498212 PLSCR1O15162 318 aa11.76□□□□□ -0.53
HMGXB4-207ENST00000498212 RRS1Q15050 365 aaKnown RBP11.76□□□□□ -0.53
HMGXB4-207ENST00000498212 CARD14Q9BXL6 1004 aa11.76□□□□□ -0.53
HMGXB4-207ENST00000498212 DOT1LQ8TEK3 1739 aa11.75□□□□□ -0.53
HMGXB4-207ENST00000498212 HSPA5P11021 654 aaKnown RBP11.75□□□□□ -0.53
HMGXB4-207ENST00000498212 NBPF14Q5TI25 921 aa11.75□□□□□ -0.53
HMGXB4-207ENST00000498212 POLR3GLQ9BT43 218 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms