RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 COG3Q96JB2 828 aa23.17■■□□□ 1.3
ABCF3-218ENST00000498136 OVOS2A0A0J9YW53 1432 aa23.16■■□□□ 1.3
ABCF3-218ENST00000498136 OVOS2Q6IE36 1432 aa23.16■■□□□ 1.3
ABCF3-218ENST00000498136 ONECUT3O60422 494 aaPredicted RBP23.16■■□□□ 1.3
ABCF3-218ENST00000498136 KIF20BQ96Q89 1820 aa23.15■■□□□ 1.3
ABCF3-218ENST00000498136 AXIN2Q9Y2T1 843 aa23.14■■□□□ 1.29
ABCF3-218ENST00000498136 CSB-PGBD3P0DP91 1061 aa23.12■■□□□ 1.29
ABCF3-218ENST00000498136 CRB1P82279 1406 aa23.12■■□□□ 1.29
ABCF3-218ENST00000498136 TOM1L2Q6ZVM7 507 aa23.12■■□□□ 1.29
ABCF3-218ENST00000498136 KRT27Q7Z3Y8 459 aa23.12■■□□□ 1.29
ABCF3-218ENST00000498136 NSD3Q9BZ95 1437 aa23.12■■□□□ 1.29
ABCF3-218ENST00000498136 GGNBP2Q9H3C7 697 aa23.12■■□□□ 1.29
ABCF3-218ENST00000498136 TCP11L2Q8N4U5 519 aa23.11■■□□□ 1.29
ABCF3-218ENST00000498136 THSD7AQ9UPZ6 1657 aa23.11■■□□□ 1.29
ABCF3-218ENST00000498136 FYB1O15117 783 aa23.1■■□□□ 1.29
ABCF3-218ENST00000498136 ABCC6O95255 1503 aa23.09■■□□□ 1.29
ABCF3-218ENST00000498136 CARD14Q9BXL6 1004 aa23.09■■□□□ 1.29
ABCF3-218ENST00000498136 WDR17Q8IZU2 1322 aa23.08■■□□□ 1.29
ABCF3-218ENST00000498136 THRAP3Q9Y2W1 955 aaKnown RBP23.08■■□□□ 1.29
ABCF3-218ENST00000498136 C11orf95C9JLR9 678 aaPredicted RBP23.07■■□□□ 1.28
ABCF3-218ENST00000498136 BARGINQ6ZT62 677 aa23.07■■□□□ 1.28
ABCF3-218ENST00000498136 FBLN1P23142 703 aa23.04■■□□□ 1.28
ABCF3-218ENST00000498136 AMPHP49418 695 aa23.04■■□□□ 1.28
ABCF3-218ENST00000498136 EP400Q96L91 3159 aa23.04■■□□□ 1.28
ABCF3-218ENST00000498136 CGNL1Q0VF96 1302 aa23.04■■□□□ 1.28
ABCF3-218ENST00000498136 PDE3BQ13370 1112 aa23.02■■□□□ 1.28
ABCF3-218ENST00000498136 FAM182BQ5T319 152 aa23.02■■□□□ 1.28
ABCF3-218ENST00000498136 PANK3Q9H999 370 aa23.02■■□□□ 1.28
ABCF3-218ENST00000498136 ERBB3P21860 1342 aa23.02■■□□□ 1.28
ABCF3-218ENST00000498136 MAP3K19Q56UN5 1328 aa23.02■■□□□ 1.28
ABCF3-218ENST00000498136 WNK3Q9BYP7 1800 aa23.01■■□□□ 1.27
ABCF3-218ENST00000498136 RRS1Q15050 365 aaKnown RBP23.01■■□□□ 1.27
ABCF3-218ENST00000498136 ANKRD24Q8TF21 1146 aa23.01■■□□□ 1.27
ABCF3-218ENST00000498136 IP6K1Q92551 441 aa23.01■■□□□ 1.27
ABCF3-218ENST00000498136 NLRP2Q9NX02 1062 aa23.01■■□□□ 1.27
ABCF3-218ENST00000498136 PARP4Q9UKK3 1724 aaKnown RBP23.01■■□□□ 1.27
ABCF3-218ENST00000498136 BLMP54132 1417 aaPredicted RBP23■■□□□ 1.27
ABCF3-218ENST00000498136 SF3B2Q13435 895 aaKnown RBP23■■□□□ 1.27
ABCF3-218ENST00000498136 CCDC125Q86Z20 511 aa23■■□□□ 1.27
ABCF3-218ENST00000498136 LTV1Q96GA3 475 aaPredicted RBP23■■□□□ 1.27
ABCF3-218ENST00000498136 CARD10Q9BWT7 1032 aa23■■□□□ 1.27
ABCF3-218ENST00000498136 KIF7Q2M1P5 1343 aa23■■□□□ 1.27
ABCF3-218ENST00000498136 CCDC7Q96M83 1385 aa22.98■■□□□ 1.27
ABCF3-218ENST00000498136 HOXC9P31274 260 aa22.97■■□□□ 1.27
ABCF3-218ENST00000498136 ANKRD26Q9UPS8 1709 aa22.96■■□□□ 1.27
ABCF3-218ENST00000498136 LRRC37A3O60309 1634 aa22.96■■□□□ 1.27
ABCF3-218ENST00000498136 FAM208AQ9UK61 1670 aaKnown RBP22.96■■□□□ 1.27
ABCF3-218ENST00000498136 RTL1A6NKG5 1358 aa22.95■■□□□ 1.26
ABCF3-218ENST00000498136 DDB1Q16531 1140 aa22.95■■□□□ 1.26
ABCF3-218ENST00000498136 CDCA7Q9BWT1 371 aaPredicted RBP22.94■■□□□ 1.26
ABCF3-218ENST00000498136 FAM196AQ6ZSG2 479 aa22.93■■□□□ 1.26
ABCF3-218ENST00000498136 KNSTRNQ9Y448 316 aa22.93■■□□□ 1.26
ABCF3-218ENST00000498136 RGPD1P0DJD0 1748 aa22.93■■□□□ 1.26
ABCF3-218ENST00000498136 MAP2P11137 1827 aaKnown RBP22.92■■□□□ 1.26
ABCF3-218ENST00000498136 SMG6Q86US8 1419 aaKnown RBP22.91■■□□□ 1.26
ABCF3-218ENST00000498136 RGPD2P0DJD1 1756 aa22.91■■□□□ 1.26
ABCF3-218ENST00000498136 PPM1GO15355 546 aaPredicted RBP22.91■■□□□ 1.26
ABCF3-218ENST00000498136 TNNT2P45379 298 aaPredicted RBP22.91■■□□□ 1.26
ABCF3-218ENST00000498136 EMILIN1Q9Y6C2 1016 aa22.91■■□□□ 1.26
ABCF3-218ENST00000498136 PEAK1Q9H792 1746 aa22.91■■□□□ 1.26
ABCF3-218ENST00000498136 FLT4P35916 1363 aa22.9■■□□□ 1.26
ABCF3-218ENST00000498136 DISP2A7MBM2 1401 aa22.9■■□□□ 1.26
ABCF3-218ENST00000498136 EXOC5O00471 708 aa22.89■■□□□ 1.25
ABCF3-218ENST00000498136 NSD2O96028 1365 aa22.89■■□□□ 1.25
ABCF3-218ENST00000498136 TRIM37O94972 964 aa22.88■■□□□ 1.25
ABCF3-218ENST00000498136 IL2RBP14784 551 aa22.88■■□□□ 1.25
ABCF3-218ENST00000498136 DEFB132Q7Z7B7 95 aa22.88■■□□□ 1.25
ABCF3-218ENST00000498136 KIF24Q5T7B8 1368 aa22.88■■□□□ 1.25
ABCF3-218ENST00000498136 WASHC2AQ641Q2 1341 aa22.87■■□□□ 1.25
ABCF3-218ENST00000498136 BAG6P46379 1132 aa22.87■■□□□ 1.25
ABCF3-218ENST00000498136 HSP90AB2PQ58FF8 381 aa22.87■■□□□ 1.25
ABCF3-218ENST00000498136 OVOS2A0A0G2JMS6 1433 aa22.87■■□□□ 1.25
ABCF3-218ENST00000498136 INSRP06213 1382 aa22.86■■□□□ 1.25
ABCF3-218ENST00000498136 TNS1Q9HBL0 1735 aaKnown RBP22.85■■□□□ 1.25
ABCF3-218ENST00000498136 MORC1Q86VD1 984 aa22.85■■□□□ 1.25
ABCF3-218ENST00000498136 TNS2Q63HR2 1409 aa22.84■■□□□ 1.25
ABCF3-218ENST00000498136 MARCH10Q8NA82 808 aaPredicted RBP22.83■■□□□ 1.25
ABCF3-218ENST00000498136 USHBP1Q8N6Y0 703 aa22.82■■□□□ 1.24
ABCF3-218ENST00000498136 POLKQ9UBT6 870 aa22.82■■□□□ 1.24
ABCF3-218ENST00000498136 SBF2Q86WG5 1849 aa22.81■■□□□ 1.24
ABCF3-218ENST00000498136 NBPF6Q5VWK0 638 aa22.81■■□□□ 1.24
ABCF3-218ENST00000498136 NBPF4Q96M43 638 aa22.81■■□□□ 1.24
ABCF3-218ENST00000498136 APBA3O96018 575 aa22.8■■□□□ 1.24
ABCF3-218ENST00000498136 EN1Q05925 392 aaPredicted RBP22.8■■□□□ 1.24
ABCF3-218ENST00000498136 CNGB1Q14028 1251 aaPredicted RBP22.79■■□□□ 1.24
ABCF3-218ENST00000498136 AMER1Q5JTC6 1135 aaPredicted RBP22.78■■□□□ 1.24
ABCF3-218ENST00000498136 CC2D1BQ5T0F9 858 aaKnown RBP22.77■■□□□ 1.24
ABCF3-218ENST00000498136 RAPGEF4Q8WZA2 1011 aa22.77■■□□□ 1.24
ABCF3-218ENST00000498136 PER1O15534 1290 aaPredicted RBP22.76■■□□□ 1.23
ABCF3-218ENST00000498136 DDX54Q8TDD1 881 aaKnown RBP22.76■■□□□ 1.23
ABCF3-218ENST00000498136 MEGF6O75095 1541 aa22.75■■□□□ 1.23
ABCF3-218ENST00000498136 KAT6BQ8WYB5 2073 aa22.74■■□□□ 1.23
ABCF3-218ENST00000498136 TATP17735 454 aaPredicted RBP22.74■■□□□ 1.23
ABCF3-218ENST00000498136 EZH2Q15910 746 aaKnown RBP22.74■■□□□ 1.23
ABCF3-218ENST00000498136 ZCRB1Q8TBF4 217 aaKnown RBP22.73■■□□□ 1.23
ABCF3-218ENST00000498136 ACSBG1Q96GR2 724 aa22.72■■□□□ 1.23
ABCF3-218ENST00000498136 BCL9O00512 1426 aa22.72■■□□□ 1.23
ABCF3-218ENST00000498136 EIF4A2Q14240 407 aaKnown RBP22.71■■□□□ 1.23
ABCF3-218ENST00000498136 BCL11BQ9C0K0 894 aaPredicted RBP22.71■■□□□ 1.23
ABCF3-218ENST00000498136 SHANK3Q9BYB0 1731 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms