RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 HDGFL2Q7Z4V5 671 aaPredicted RBP28.73■■■□□ 2.19
LMBR1-219ENST00000498034 NME9Q86XW9 330 aa28.73■■■□□ 2.19
LMBR1-219ENST00000498034 WDR17Q8IZU2 1322 aa28.72■■■□□ 2.19
LMBR1-219ENST00000498034 EZH2Q15910 746 aaKnown RBP28.72■■■□□ 2.19
LMBR1-219ENST00000498034 TESK2Q96S53 571 aa28.72■■■□□ 2.19
LMBR1-219ENST00000498034 PSDA5PKW4 1024 aaPredicted RBP28.71■■■□□ 2.19
LMBR1-219ENST00000498034 USP31Q70CQ4 1352 aa28.71■■■□□ 2.19
LMBR1-219ENST00000498034 APBA3O96018 575 aa28.7■■■□□ 2.18
LMBR1-219ENST00000498034 PUS7Q96PZ0 661 aaKnown RBP28.7■■■□□ 2.18
LMBR1-219ENST00000498034 A0A1W2PP64 1363 aa28.68■■■□□ 2.18
LMBR1-219ENST00000498034 CSB-PGBD3P0DP91 1061 aa28.68■■■□□ 2.18
LMBR1-219ENST00000498034 CAMKK2Q96RR4 588 aa28.68■■■□□ 2.18
LMBR1-219ENST00000498034 TERF2IPQ9NYB0 399 aa28.68■■■□□ 2.18
LMBR1-219ENST00000498034 USP54Q70EL1 1684 aa28.67■■■□□ 2.18
LMBR1-219ENST00000498034 EDC4Q6P2E9 1401 aaKnown RBP28.67■■■□□ 2.18
LMBR1-219ENST00000498034 LRRC37A3O60309 1634 aa28.65■■■□□ 2.18
LMBR1-219ENST00000498034 DDB1Q16531 1140 aa28.65■■■□□ 2.18
LMBR1-219ENST00000498034 CARD10Q9BWT7 1032 aa28.64■■■□□ 2.18
LMBR1-219ENST00000498034 WNK3Q9BYP7 1800 aa28.64■■■□□ 2.17
LMBR1-219ENST00000498034 SRCAPQ6ZRS2 3230 aa28.62■■■□□ 2.17
LMBR1-219ENST00000498034 OVOS2A0A0G2JMS6 1433 aa28.61■■■□□ 2.17
LMBR1-219ENST00000498034 OVOS2A0A0J9YW53 1432 aa28.61■■■□□ 2.17
LMBR1-219ENST00000498034 OVOS2Q6IE36 1432 aa28.61■■■□□ 2.17
LMBR1-219ENST00000498034 PEAK1Q9H792 1746 aa28.61■■■□□ 2.17
LMBR1-219ENST00000498034 ABCC6O95255 1503 aa28.61■■■□□ 2.17
LMBR1-219ENST00000498034 R3HDM1Q15032 1099 aaKnown RBP28.61■■■□□ 2.17
LMBR1-219ENST00000498034 LTN1O94822 1766 aa28.6■■■□□ 2.17
LMBR1-219ENST00000498034 SLC24A1O60721 1099 aa28.59■■■□□ 2.17
LMBR1-219ENST00000498034 CDCA7Q9BWT1 371 aaPredicted RBP28.59■■■□□ 2.17
LMBR1-219ENST00000498034 PARD3Q8TEW0 1356 aa28.59■■■□□ 2.17
LMBR1-219ENST00000498034 C11orf95C9JLR9 678 aaPredicted RBP28.58■■■□□ 2.17
LMBR1-219ENST00000498034 USP47Q96K76 1375 aa28.58■■■□□ 2.17
LMBR1-219ENST00000498034 NINLQ9Y2I6 1382 aa28.58■■■□□ 2.17
LMBR1-219ENST00000498034 MARCH10Q8NA82 808 aaPredicted RBP28.57■■■□□ 2.16
LMBR1-219ENST00000498034 RREB1Q92766 1687 aa28.56■■■□□ 2.16
LMBR1-219ENST00000498034 CCDC7Q96M83 1385 aa28.56■■■□□ 2.16
LMBR1-219ENST00000498034 SBF2Q86WG5 1849 aa28.55■■■□□ 2.16
LMBR1-219ENST00000498034 PCGF6Q9BYE7 350 aa28.55■■■□□ 2.16
LMBR1-219ENST00000498034 LRP5O75197 1615 aa28.54■■■□□ 2.16
LMBR1-219ENST00000498034 ERBB3P21860 1342 aa28.54■■■□□ 2.16
LMBR1-219ENST00000498034 TMF1P82094 1093 aa28.53■■■□□ 2.16
LMBR1-219ENST00000498034 NLRP2Q9NX02 1062 aa28.53■■■□□ 2.16
LMBR1-219ENST00000498034 NUP188Q5SRE5 1749 aa28.52■■■□□ 2.16
LMBR1-219ENST00000498034 EXOC5O00471 708 aa28.52■■■□□ 2.16
LMBR1-219ENST00000498034 PTF1AQ7RTS3 328 aa28.52■■■□□ 2.16
LMBR1-219ENST00000498034 ANKRD24Q8TF21 1146 aa28.51■■■□□ 2.15
LMBR1-219ENST00000498034 ANKRD36BQ8N2N9 1353 aa28.5■■■□□ 2.15
LMBR1-219ENST00000498034 COG3Q96JB2 828 aa28.49■■■□□ 2.15
LMBR1-219ENST00000498034 BCL11BQ9C0K0 894 aaPredicted RBP28.48■■■□□ 2.15
LMBR1-219ENST00000498034 BCL9O00512 1426 aa28.47■■■□□ 2.15
LMBR1-219ENST00000498034 FBLN1P23142 703 aa28.47■■■□□ 2.15
LMBR1-219ENST00000498034 TIMELESSQ9UNS1 1208 aa28.47■■■□□ 2.15
LMBR1-219ENST00000498034 NBPF14Q5TI25 921 aa28.46■■■□□ 2.15
LMBR1-219ENST00000498034 IP6K1Q92551 441 aa28.46■■■□□ 2.15
LMBR1-219ENST00000498034 TNS2Q63HR2 1409 aa28.45■■■□□ 2.15
LMBR1-219ENST00000498034 PLSCR1O15162 318 aa28.45■■■□□ 2.14
LMBR1-219ENST00000498034 CLSPNQ9HAW4 1339 aa28.44■■■□□ 2.14
LMBR1-219ENST00000498034 IL2RBP14784 551 aa28.44■■■□□ 2.14
LMBR1-219ENST00000498034 LTV1Q96GA3 475 aaPredicted RBP28.43■■■□□ 2.14
LMBR1-219ENST00000498034 MAP3K19Q56UN5 1328 aa28.43■■■□□ 2.14
LMBR1-219ENST00000498034 GGNBP2Q9H3C7 697 aa28.41■■■□□ 2.14
LMBR1-219ENST00000498034 RGPD3A6NKT7 1758 aaPredicted RBP28.41■■■□□ 2.14
LMBR1-219ENST00000498034 RGPD4Q7Z3J3 1758 aa28.41■■■□□ 2.14
LMBR1-219ENST00000498034 FYB1O15117 783 aa28.4■■■□□ 2.14
LMBR1-219ENST00000498034 CDCA8Q53HL2 280 aa28.4■■■□□ 2.14
LMBR1-219ENST00000498034 HOXC9P31274 260 aa28.39■■■□□ 2.14
LMBR1-219ENST00000498034 KCNQ2O43526 872 aa28.38■■■□□ 2.13
LMBR1-219ENST00000498034 AMPHP49418 695 aa28.38■■■□□ 2.13
LMBR1-219ENST00000498034 PROM2Q8N271 834 aa28.37■■■□□ 2.13
LMBR1-219ENST00000498034 ACSBG1Q96GR2 724 aa28.36■■■□□ 2.13
LMBR1-219ENST00000498034 RRS1Q15050 365 aaKnown RBP28.35■■■□□ 2.13
LMBR1-219ENST00000498034 FAM208AQ9UK61 1670 aaKnown RBP28.35■■■□□ 2.13
LMBR1-219ENST00000498034 ANO8Q9HCE9 1232 aaPredicted RBP28.34■■■□□ 2.13
LMBR1-219ENST00000498034 MYOM1P52179 1685 aa28.32■■■□□ 2.12
LMBR1-219ENST00000498034 NHSQ6T4R5 1651 aa28.32■■■□□ 2.12
LMBR1-219ENST00000498034 RGPD2P0DJD1 1756 aa28.32■■■□□ 2.12
LMBR1-219ENST00000498034 TXNRD1Q16881 649 aa28.31■■■□□ 2.12
LMBR1-219ENST00000498034 CARD14Q9BXL6 1004 aa28.31■■■□□ 2.12
LMBR1-219ENST00000498034 KIF20BQ96Q89 1820 aa28.31■■■□□ 2.12
LMBR1-219ENST00000498034 RTL1A6NKG5 1358 aa28.28■■■□□ 2.12
LMBR1-219ENST00000498034 DDX54Q8TDD1 881 aaKnown RBP28.28■■■□□ 2.12
LMBR1-219ENST00000498034 NSD3Q9BZ95 1437 aa28.26■■■□□ 2.12
LMBR1-219ENST00000498034 CCER1Q8TC90 406 aaPredicted RBP28.26■■■□□ 2.11
LMBR1-219ENST00000498034 KAT6BQ8WYB5 2073 aa28.24■■■□□ 2.11
LMBR1-219ENST00000498034 NBPF6Q5VWK0 638 aa28.24■■■□□ 2.11
LMBR1-219ENST00000498034 NBPF4Q96M43 638 aa28.24■■■□□ 2.11
LMBR1-219ENST00000498034 SPON1Q9HCB6 807 aa28.24■■■□□ 2.11
LMBR1-219ENST00000498034 BTAF1O14981 1849 aa28.23■■■□□ 2.11
LMBR1-219ENST00000498034 POLR3GLQ9BT43 218 aa28.23■■■□□ 2.11
LMBR1-219ENST00000498034 HSP90AB2PQ58FF8 381 aa28.22■■■□□ 2.11
LMBR1-219ENST00000498034 USHBP1Q8N6Y0 703 aa28.22■■■□□ 2.11
LMBR1-219ENST00000498034 PDGFDQ9GZP0 370 aaPredicted RBP28.22■■■□□ 2.11
LMBR1-219ENST00000498034 MEGF6O75095 1541 aa28.22■■■□□ 2.11
LMBR1-219ENST00000498034 STK32BQ9NY57 414 aa28.21■■■□□ 2.11
LMBR1-219ENST00000498034 CASZ1Q86V15 1759 aa28.2■■■□□ 2.11
LMBR1-219ENST00000498034 ZCRB1Q8TBF4 217 aaKnown RBP28.2■■■□□ 2.1
LMBR1-219ENST00000498034 SLC15A2Q16348 729 aa28.19■■■□□ 2.1
LMBR1-219ENST00000498034 INSRP06213 1382 aa28.19■■■□□ 2.1
LMBR1-219ENST00000498034 SMG6Q86US8 1419 aaKnown RBP28.18■■■□□ 2.1
LMBR1-219ENST00000498034 SHANK3Q9BYB0 1731 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms