RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 EDC4Q6P2E9 1401 aaKnown RBP15.71■□□□□ 0.11
ERCC8-208ENST00000497892 PLEKHG5O94827 1062 aa15.71■□□□□ 0.11
ERCC8-208ENST00000497892 TERF2IPQ9NYB0 399 aa15.71■□□□□ 0.11
ERCC8-208ENST00000497892 NRAPQ86VF7 1730 aa15.71■□□□□ 0.1
ERCC8-208ENST00000497892 BCL9LQ86UU0 1499 aa15.71■□□□□ 0.1
ERCC8-208ENST00000497892 TTC21BQ7Z4L5 1316 aa15.7■□□□□ 0.1
ERCC8-208ENST00000497892 NUTM2GQ5VZR2 741 aa15.7■□□□□ 0.1
ERCC8-208ENST00000497892 HDGFL2Q7Z4V5 671 aaPredicted RBP15.7■□□□□ 0.1
ERCC8-208ENST00000497892 NLRP13Q86W25 1043 aa15.69■□□□□ 0.1
ERCC8-208ENST00000497892 USP21Q9UK80 565 aa15.69■□□□□ 0.1
ERCC8-208ENST00000497892 ANKRD36BQ8N2N9 1353 aa15.69■□□□□ 0.1
ERCC8-208ENST00000497892 ATRNO75882 1429 aa15.68■□□□□ 0.1
ERCC8-208ENST00000497892 LMO7Q8WWI1 1683 aa15.67■□□□□ 0.1
ERCC8-208ENST00000497892 CDK12Q9NYV4 1490 aaPredicted RBP15.66■□□□□ 0.1
ERCC8-208ENST00000497892 CPDO75976 1380 aa15.66■□□□□ 0.1
ERCC8-208ENST00000497892 KIAA0232Q92628 1395 aa15.66■□□□□ 0.1
ERCC8-208ENST00000497892 NLRP6P59044 892 aa15.66■□□□□ 0.1
ERCC8-208ENST00000497892 USP31Q70CQ4 1352 aa15.65■□□□□ 0.1
ERCC8-208ENST00000497892 NFAT5O94916 1531 aa15.65■□□□□ 0.1
ERCC8-208ENST00000497892 FAM83GA6ND36 823 aa15.65■□□□□ 0.1
ERCC8-208ENST00000497892 KIF20BQ96Q89 1820 aa15.64■□□□□ 0.09
ERCC8-208ENST00000497892 OVOS2A0A0J9YW53 1432 aa15.64■□□□□ 0.09
ERCC8-208ENST00000497892 OVOS2Q6IE36 1432 aa15.64■□□□□ 0.09
ERCC8-208ENST00000497892 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.64■□□□□ 0.09
ERCC8-208ENST00000497892 PRDM11Q9NQV5 511 aa15.64■□□□□ 0.09
ERCC8-208ENST00000497892 TRPC5Q9UL62 973 aaPredicted RBP15.64■□□□□ 0.09
ERCC8-208ENST00000497892 GLI3P10071 1580 aa15.63■□□□□ 0.09
ERCC8-208ENST00000497892 GCP02774 474 aa15.63■□□□□ 0.09
ERCC8-208ENST00000497892 NME9Q86XW9 330 aa15.63■□□□□ 0.09
ERCC8-208ENST00000497892 UNC5CLQ8IV45 518 aa15.63■□□□□ 0.09
ERCC8-208ENST00000497892 QTRT2Q9H974 415 aaKnown RBP15.63■□□□□ 0.09
ERCC8-208ENST00000497892 RXRBP28702 533 aa15.62■□□□□ 0.09
ERCC8-208ENST00000497892 ZC3H6P61129 1189 aaKnown RBP15.62■□□□□ 0.09
ERCC8-208ENST00000497892 RBM6P78332 1123 aaKnown RBP15.62■□□□□ 0.09
ERCC8-208ENST00000497892 COL18A1P39060 1754 aa15.62■□□□□ 0.09
ERCC8-208ENST00000497892 POTEIP0CG38 1075 aa15.61■□□□□ 0.09
ERCC8-208ENST00000497892 BTG4Q9NY30 223 aa15.61■□□□□ 0.09
ERCC8-208ENST00000497892 ABCC6O95255 1503 aa15.61■□□□□ 0.09
ERCC8-208ENST00000497892 CAMTA1Q9Y6Y1 1673 aa15.6■□□□□ 0.09
ERCC8-208ENST00000497892 RGS12O14924 1447 aa15.6■□□□□ 0.09
ERCC8-208ENST00000497892 LTN1O94822 1766 aa15.6■□□□□ 0.09
ERCC8-208ENST00000497892 KCNH5Q8NCM2 988 aa15.6■□□□□ 0.09
ERCC8-208ENST00000497892 C11orf95C9JLR9 678 aaPredicted RBP15.59■□□□□ 0.09
ERCC8-208ENST00000497892 FKBP8Q14318 412 aa15.59■□□□□ 0.09
ERCC8-208ENST00000497892 CHRNA2Q15822 529 aa15.59■□□□□ 0.09
ERCC8-208ENST00000497892 VPS72Q15906 364 aa15.59■□□□□ 0.09
ERCC8-208ENST00000497892 NSD3Q9BZ95 1437 aa15.59■□□□□ 0.09
ERCC8-208ENST00000497892 GJD4Q96KN9 370 aaPredicted RBP15.58■□□□□ 0.08
ERCC8-208ENST00000497892 AATKQ6ZMQ8 1374 aa15.58■□□□□ 0.08
ERCC8-208ENST00000497892 COL5A2P05997 1499 aaPredicted RBP15.58■□□□□ 0.08
ERCC8-208ENST00000497892 POLR3GLQ9BT43 218 aa15.57■□□□□ 0.08
ERCC8-208ENST00000497892 CARD14Q9BXL6 1004 aa15.57■□□□□ 0.08
ERCC8-208ENST00000497892 KIF7Q2M1P5 1343 aa15.57■□□□□ 0.08
ERCC8-208ENST00000497892 ARHGEF25Q86VW2 580 aa15.56■□□□□ 0.08
ERCC8-208ENST00000497892 ANKRD26Q9UPS8 1709 aa15.56■□□□□ 0.08
ERCC8-208ENST00000497892 RGPD5Q99666 1765 aa15.56■□□□□ 0.08
ERCC8-208ENST00000497892 SOCS7O14512 581 aa15.55■□□□□ 0.08
ERCC8-208ENST00000497892 SOX12O15370 315 aa15.55■□□□□ 0.08
ERCC8-208ENST00000497892 PHF12Q96QT6 1004 aa15.55■□□□□ 0.08
ERCC8-208ENST00000497892 FYB1O15117 783 aa15.54■□□□□ 0.08
ERCC8-208ENST00000497892 COG3Q96JB2 828 aa15.54■□□□□ 0.08
ERCC8-208ENST00000497892 THSD7AQ9UPZ6 1657 aa15.54■□□□□ 0.08
ERCC8-208ENST00000497892 SPATA31A5Q5VU36 1347 aa15.53■□□□□ 0.08
ERCC8-208ENST00000497892 SPATA31A7Q8IWB4 1347 aa15.53■□□□□ 0.08
ERCC8-208ENST00000497892 GALR2O43603 387 aaPredicted RBP15.53■□□□□ 0.08
ERCC8-208ENST00000497892 CCDC7Q96M83 1385 aa15.52■□□□□ 0.08
ERCC8-208ENST00000497892 ZBTB7CA1YPR0 619 aa15.52■□□□□ 0.08
ERCC8-208ENST00000497892 GGNBP2Q9H3C7 697 aa15.52■□□□□ 0.08
ERCC8-208ENST00000497892 STRN4Q9NRL3 753 aa15.52■□□□□ 0.08
ERCC8-208ENST00000497892 CCDC9Q9Y3X0 531 aaKnown RBP15.52■□□□□ 0.08
ERCC8-208ENST00000497892 BRWD3Q6RI45 1802 aa15.52■□□□□ 0.07
ERCC8-208ENST00000497892 CGNL1Q0VF96 1302 aa15.51■□□□□ 0.07
ERCC8-208ENST00000497892 SPATA31A1Q5TZJ5 1347 aa15.51■□□□□ 0.07
ERCC8-208ENST00000497892 MIER1Q8N108 512 aa15.51■□□□□ 0.07
ERCC8-208ENST00000497892 DCBLD2Q96PD2 775 aa15.51■□□□□ 0.07
ERCC8-208ENST00000497892 WNK3Q9BYP7 1800 aa15.51■□□□□ 0.07
ERCC8-208ENST00000497892 WASHC2AQ641Q2 1341 aa15.5■□□□□ 0.07
ERCC8-208ENST00000497892 PANK3Q9H999 370 aa15.5■□□□□ 0.07
ERCC8-208ENST00000497892 AXIN2Q9Y2T1 843 aa15.5■□□□□ 0.07
ERCC8-208ENST00000497892 CRB1P82279 1406 aa15.5■□□□□ 0.07
ERCC8-208ENST00000497892 FAM208AQ9UK61 1670 aaKnown RBP15.49■□□□□ 0.07
ERCC8-208ENST00000497892 ONECUT3O60422 494 aaPredicted RBP15.49■□□□□ 0.07
ERCC8-208ENST00000497892 EVA1CP58658 441 aa15.49■□□□□ 0.07
ERCC8-208ENST00000497892 LARP1Q6PKG0 1096 aaKnown RBP15.49■□□□□ 0.07
ERCC8-208ENST00000497892 BLMP54132 1417 aaPredicted RBP15.49■□□□□ 0.07
ERCC8-208ENST00000497892 WDR17Q8IZU2 1322 aa15.48■□□□□ 0.07
ERCC8-208ENST00000497892 PEAK1Q9H792 1746 aa15.48■□□□□ 0.07
ERCC8-208ENST00000497892 RTL1A6NKG5 1358 aa15.48■□□□□ 0.07
ERCC8-208ENST00000497892 NSD2O96028 1365 aa15.48■□□□□ 0.07
ERCC8-208ENST00000497892 MAP3K19Q56UN5 1328 aa15.47■□□□□ 0.07
ERCC8-208ENST00000497892 PARP4Q9UKK3 1724 aaKnown RBP15.47■□□□□ 0.07
ERCC8-208ENST00000497892 EP400Q96L91 3159 aa15.47■□□□□ 0.07
ERCC8-208ENST00000497892 FAM98CQ17RN3 349 aaKnown RBP15.46■□□□□ 0.07
ERCC8-208ENST00000497892 LHX8Q68G74 356 aa15.46■□□□□ 0.07
ERCC8-208ENST00000497892 SEPT12Q8IYM1 358 aa15.46■□□□□ 0.07
ERCC8-208ENST00000497892 ERBB3P21860 1342 aa15.45■□□□□ 0.06
ERCC8-208ENST00000497892 BARGINQ6ZT62 677 aa15.45■□□□□ 0.06
ERCC8-208ENST00000497892 LRRC37A3O60309 1634 aa15.44■□□□□ 0.06
ERCC8-208ENST00000497892 FBLN1P23142 703 aa15.44■□□□□ 0.06
ERCC8-208ENST00000497892 TCP11L2Q8N4U5 519 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms