RNA–Protein interactions for RNA: ENST00000497315.5

PSMD6-211, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 3

Gene PSMD6, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-211ENST00000497315 ALDH1A1P00352 501 aa9.6□□□□□ -0.87
PSMD6-211ENST00000497315 FSHRP23945 695 aa9.6□□□□□ -0.87
PSMD6-211ENST00000497315 SLFNL1Q499Z3 407 aa9.6□□□□□ -0.87
PSMD6-211ENST00000497315 TRIM67Q6ZTA4 783 aa9.6□□□□□ -0.87
PSMD6-211ENST00000497315 CDK15Q96Q40 435 aa9.6□□□□□ -0.87
PSMD6-211ENST00000497315 MAP4K5Q9Y4K4 846 aa9.6□□□□□ -0.87
PSMD6-211ENST00000497315 TTC24A2A3L6 582 aaPredicted RBP9.59□□□□□ -0.87
PSMD6-211ENST00000497315 RNF135Q8IUD6 432 aa9.59□□□□□ -0.87
PSMD6-211ENST00000497315 CYP4X1Q8N118 509 aa9.59□□□□□ -0.87
PSMD6-211ENST00000497315 SNIP1Q8TAD8 396 aaKnown RBP9.59□□□□□ -0.87
PSMD6-211ENST00000497315 ADH1CP00326 375 aa9.58□□□□□ -0.88
PSMD6-211ENST00000497315 MPNDQ8N594 471 aa9.58□□□□□ -0.88
PSMD6-211ENST00000497315 SERPINA10Q9UK55 444 aa9.58□□□□□ -0.88
PSMD6-211ENST00000497315 GRM5P41594 1212 aa9.57□□□□□ -0.88
PSMD6-211ENST00000497315 INTS6LQ5JSJ4 861 aaKnown RBP9.57□□□□□ -0.88
PSMD6-211ENST00000497315 TBC1D9Q6ZT07 1266 aa9.57□□□□□ -0.88
PSMD6-211ENST00000497315 ESPNB1AK53 854 aa9.56□□□□□ -0.88
PSMD6-211ENST00000497315 J3QL48 77 aa9.56□□□□□ -0.88
PSMD6-211ENST00000497315 SKIP12755 728 aa9.56□□□□□ -0.88
PSMD6-211ENST00000497315 PRR20EP86478 221 aa9.56□□□□□ -0.88
PSMD6-211ENST00000497315 PRR20CP86479 221 aa9.56□□□□□ -0.88
PSMD6-211ENST00000497315 PRR20DP86480 221 aa9.56□□□□□ -0.88
PSMD6-211ENST00000497315 PRR20BP86481 221 aa9.56□□□□□ -0.88
PSMD6-211ENST00000497315 PRR20AP86496 221 aa9.56□□□□□ -0.88
PSMD6-211ENST00000497315 RNF20Q5VTR2 975 aa9.56□□□□□ -0.88
PSMD6-211ENST00000497315 PHTF2Q8N3S3 785 aa9.56□□□□□ -0.88
PSMD6-211ENST00000497315 PPP1R12CQ9BZL4 782 aa9.56□□□□□ -0.88
PSMD6-211ENST00000497315 TFIP11Q9UBB9 837 aaKnown RBP9.56□□□□□ -0.88
PSMD6-211ENST00000497315 PDZRN3Q9UPQ7 1066 aa9.56□□□□□ -0.88
PSMD6-211ENST00000497315 WASF2Q9Y6W5 498 aa9.56□□□□□ -0.88
PSMD6-211ENST00000497315 PALM3A6NDB9 673 aaPredicted RBP9.55□□□□□ -0.88
PSMD6-211ENST00000497315 TSGA10IPQ3SY00 556 aa9.55□□□□□ -0.88
PSMD6-211ENST00000497315 TOR4AQ9NXH8 423 aa9.55□□□□□ -0.88
PSMD6-211ENST00000497315 NR3C2P08235 984 aa9.54□□□□□ -0.88
PSMD6-211ENST00000497315 NR5A1Q13285 461 aa9.54□□□□□ -0.88
PSMD6-211ENST00000497315 NNTQ13423 1086 aa9.54□□□□□ -0.88
PSMD6-211ENST00000497315 SEPT12Q8IYM1 358 aa9.54□□□□□ -0.88
PSMD6-211ENST00000497315 CCDC85AQ96PX6 553 aaPredicted RBP9.54□□□□□ -0.88
PSMD6-211ENST00000497315 ATP9BO43861 1147 aa9.53□□□□□ -0.88
PSMD6-211ENST00000497315 RFX1P22670 979 aa9.53□□□□□ -0.88
PSMD6-211ENST00000497315 CCDC116Q8IYX3 515 aa9.53□□□□□ -0.88
PSMD6-211ENST00000497315 DEPDC4Q8N2C3 294 aa9.53□□□□□ -0.88
PSMD6-211ENST00000497315 PLPP7Q8NBV4 271 aa9.53□□□□□ -0.88
PSMD6-211ENST00000497315 NFATC2IPQ8NCF5 419 aa9.53□□□□□ -0.88
PSMD6-211ENST00000497315 DOLKQ9UPQ8 538 aa9.53□□□□□ -0.88
PSMD6-211ENST00000497315 PCDHB11Q9Y5F2 797 aa9.53□□□□□ -0.88
PSMD6-211ENST00000497315 USP17L5A8MUK1 530 aa9.52□□□□□ -0.89
PSMD6-211ENST00000497315 ERVH48-1M5A8F1 160 aa9.52□□□□□ -0.89
PSMD6-211ENST00000497315 LMOD1P29536 600 aaPredicted RBP9.52□□□□□ -0.89
PSMD6-211ENST00000497315 SMPD1P17405 629 aa9.51□□□□□ -0.89
PSMD6-211ENST00000497315 OXLD1Q5BKU9 147 aa9.51□□□□□ -0.89
PSMD6-211ENST00000497315 CFAP70Q5T0N1 1121 aa9.51□□□□□ -0.89
PSMD6-211ENST00000497315 CDCA7Q9BWT1 371 aaPredicted RBP9.51□□□□□ -0.89
PSMD6-211ENST00000497315 TMPRSS4Q9NRS4 437 aa9.51□□□□□ -0.89
PSMD6-211ENST00000497315 MAFBQ9Y5Q3 323 aaPredicted RBP9.51□□□□□ -0.89
PSMD6-211ENST00000497315 USP17L3A6NCW0 530 aa9.5□□□□□ -0.89
PSMD6-211ENST00000497315 USP17L4A6NCW7 530 aa9.5□□□□□ -0.89
PSMD6-211ENST00000497315 DHX9Q08211 1270 aaKnown RBP9.5□□□□□ -0.89
PSMD6-211ENST00000497315 PPP1R26Q5T8A7 1209 aaPredicted RBP9.5□□□□□ -0.89
PSMD6-211ENST00000497315 USP17L2Q6R6M4 530 aa9.5□□□□□ -0.89
PSMD6-211ENST00000497315 USP17L1Q7RTZ2 530 aa9.5□□□□□ -0.89
PSMD6-211ENST00000497315 CHIC2Q9UKJ5 165 aa9.5□□□□□ -0.89
PSMD6-211ENST00000497315 GFRA3O60609 400 aa9.49□□□□□ -0.89
PSMD6-211ENST00000497315 NCOA4Q13772 614 aa9.49□□□□□ -0.89
PSMD6-211ENST00000497315 MAP7D1Q3KQU3 841 aa9.49□□□□□ -0.89
PSMD6-211ENST00000497315 TRAF7Q6Q0C0 670 aa9.49□□□□□ -0.89
PSMD6-211ENST00000497315 FAM187AA6NFU0 413 aa9.48□□□□□ -0.89
PSMD6-211ENST00000497315 CCDC125Q86Z20 511 aa9.48□□□□□ -0.89
PSMD6-211ENST00000497315 HPS1Q92902 700 aa9.48□□□□□ -0.89
PSMD6-211ENST00000497315 CYLDQ9NQC7 956 aa9.48□□□□□ -0.89
PSMD6-211ENST00000497315 EML3Q32P44 896 aa9.47□□□□□ -0.89
PSMD6-211ENST00000497315 ZNF784Q8NCA9 323 aaPredicted RBP9.47□□□□□ -0.89
PSMD6-211ENST00000497315 EMILIN1Q9Y6C2 1016 aa9.47□□□□□ -0.89
PSMD6-211ENST00000497315 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.46□□□□□ -0.9
PSMD6-211ENST00000497315 SCTRP47872 440 aa9.46□□□□□ -0.9
PSMD6-211ENST00000497315 WDR4P57081 412 aaKnown RBP9.46□□□□□ -0.9
PSMD6-211ENST00000497315 CDCA8Q53HL2 280 aa9.46□□□□□ -0.9
PSMD6-211ENST00000497315 PLEKHM2Q8IWE5 1019 aa9.46□□□□□ -0.9
PSMD6-211ENST00000497315 ITPKCQ96DU7 683 aa9.46□□□□□ -0.9
PSMD6-211ENST00000497315 PGPEP1Q9NXJ5 209 aa9.46□□□□□ -0.9
PSMD6-211ENST00000497315 MYT1Q01538 1121 aa9.45□□□□□ -0.9
PSMD6-211ENST00000497315 ESF1Q9H501 851 aaKnown RBP9.45□□□□□ -0.9
PSMD6-211ENST00000497315 ZIC2O95409 532 aaPredicted RBP9.44□□□□□ -0.9
PSMD6-211ENST00000497315 MYCP01106 439 aaPredicted RBP9.44□□□□□ -0.9
PSMD6-211ENST00000497315 USP4Q13107 963 aa9.44□□□□□ -0.9
PSMD6-211ENST00000497315 ZFAND3Q9H8U3 227 aa9.44□□□□□ -0.9
PSMD6-211ENST00000497315 MKRN1Q9UHC7 482 aaKnown RBP9.44□□□□□ -0.9
PSMD6-211ENST00000497315 NRG2O14511 850 aaPredicted RBP9.43□□□□□ -0.9
PSMD6-211ENST00000497315 LZTS3O60299 673 aaPredicted RBP9.43□□□□□ -0.9
PSMD6-211ENST00000497315 TIMP2P16035 220 aa9.43□□□□□ -0.9
PSMD6-211ENST00000497315 ERVK-9P63128 1117 aa9.43□□□□□ -0.9
PSMD6-211ENST00000497315 CC2D2BQ6DHV5 1058 aa9.43□□□□□ -0.9
PSMD6-211ENST00000497315 KLF16Q9BXK1 252 aaPredicted RBP9.43□□□□□ -0.9
PSMD6-211ENST00000497315 NOD1Q9Y239 953 aa9.43□□□□□ -0.9
PSMD6-211ENST00000497315 LILRA1O75019 489 aa9.42□□□□□ -0.9
PSMD6-211ENST00000497315 PKDCCQ504Y2 493 aa9.42□□□□□ -0.9
PSMD6-211ENST00000497315 SIRT1Q96EB6 747 aa9.42□□□□□ -0.9
PSMD6-211ENST00000497315 VRTNQ9H8Y1 702 aa9.42□□□□□ -0.9
PSMD6-211ENST00000497315 ADD1P35611 737 aaKnown RBP9.41□□□□□ -0.9
PSMD6-211ENST00000497315 CBLBQ13191 982 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms