RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 RGPD1P0DJD0 1748 aa8.49□□□□□ -1.05
HMGCL-206ENST00000496907 KCNQ2O43526 872 aa8.49□□□□□ -1.05
HMGCL-206ENST00000496907 TMF1P82094 1093 aa8.49□□□□□ -1.05
HMGCL-206ENST00000496907 TNS4Q8IZW8 715 aa8.49□□□□□ -1.05
HMGCL-206ENST00000496907 FKBP8Q14318 412 aa8.48□□□□□ -1.05
HMGCL-206ENST00000496907 VPS72Q15906 364 aa8.48□□□□□ -1.05
HMGCL-206ENST00000496907 CDK19Q9BWU1 502 aa8.48□□□□□ -1.05
HMGCL-206ENST00000496907 CCDC61Q9Y6R9 512 aa8.48□□□□□ -1.05
HMGCL-206ENST00000496907 NWD2Q9ULI1 1742 aa8.48□□□□□ -1.05
HMGCL-206ENST00000496907 ST20-MTHFSA0A0A6YYL1 179 aa8.47□□□□□ -1.05
HMGCL-206ENST00000496907 HSPA6P17066 643 aa8.47□□□□□ -1.05
HMGCL-206ENST00000496907 SRPK2P78362 688 aaKnown RBP8.47□□□□□ -1.05
HMGCL-206ENST00000496907 PSME1Q06323 249 aa8.47□□□□□ -1.05
HMGCL-206ENST00000496907 SAFB2Q14151 953 aaKnown RBP eCLIP8.47□□□□□ -1.05
HMGCL-206ENST00000496907 MINK1Q8N4C8 1332 aaPredicted RBP8.47□□□□□ -1.05
HMGCL-206ENST00000496907 KIF1AQ12756 1690 aa8.46□□□□□ -1.05
HMGCL-206ENST00000496907 ST18O60284 1047 aa8.46□□□□□ -1.06
HMGCL-206ENST00000496907 LMOD2Q6P5Q4 547 aa8.46□□□□□ -1.06
HMGCL-206ENST00000496907 CABLES1Q8TDN4 633 aa8.46□□□□□ -1.06
HMGCL-206ENST00000496907 SPATA31A3Q5VYP0 1347 aa8.46□□□□□ -1.06
HMGCL-206ENST00000496907 USP47Q96K76 1375 aa8.46□□□□□ -1.06
HMGCL-206ENST00000496907 ABCA3Q99758 1704 aa8.46□□□□□ -1.06
HMGCL-206ENST00000496907 ANKARQ7Z5J8 1434 aa8.46□□□□□ -1.06
HMGCL-206ENST00000496907 TRPM1Q7Z4N2 1603 aa8.45□□□□□ -1.06
HMGCL-206ENST00000496907 FAM98CQ17RN3 349 aaKnown RBP8.45□□□□□ -1.06
HMGCL-206ENST00000496907 NUDT16Q96DE0 195 aaKnown RBP8.45□□□□□ -1.06
HMGCL-206ENST00000496907 CAMKK2Q96RR4 588 aa8.45□□□□□ -1.06
HMGCL-206ENST00000496907 KNDC1Q76NI1 1749 aa8.45□□□□□ -1.06
HMGCL-206ENST00000496907 TNS1Q9HBL0 1735 aaKnown RBP8.45□□□□□ -1.06
HMGCL-206ENST00000496907 PLEKHH1Q9ULM0 1364 aa8.45□□□□□ -1.06
HMGCL-206ENST00000496907 ADGRB2O60241 1585 aa8.44□□□□□ -1.06
HMGCL-206ENST00000496907 FMN2Q9NZ56 1722 aa8.44□□□□□ -1.06
HMGCL-206ENST00000496907 PLEKHG3A1L390 1219 aa8.44□□□□□ -1.06
HMGCL-206ENST00000496907 POTEFA5A3E0 1075 aa8.44□□□□□ -1.06
HMGCL-206ENST00000496907 ONECUT3O60422 494 aaPredicted RBP8.44□□□□□ -1.06
HMGCL-206ENST00000496907 KRT28Q7Z3Y7 464 aa8.44□□□□□ -1.06
HMGCL-206ENST00000496907 HIRIP3Q9BW71 556 aaPredicted RBP8.44□□□□□ -1.06
HMGCL-206ENST00000496907 PHF8Q9UPP1 1060 aa8.44□□□□□ -1.06
HMGCL-206ENST00000496907 BRD4O60885 1362 aaPredicted RBP8.44□□□□□ -1.06
HMGCL-206ENST00000496907 TNS3Q68CZ2 1445 aa8.44□□□□□ -1.06
HMGCL-206ENST00000496907 NRKQ7Z2Y5 1582 aa8.44□□□□□ -1.06
HMGCL-206ENST00000496907 NGDNQ8NEJ9 315 aaKnown RBP8.43□□□□□ -1.06
HMGCL-206ENST00000496907 TESK2Q96S53 571 aa8.43□□□□□ -1.06
HMGCL-206ENST00000496907 TERF2IPQ9NYB0 399 aa8.43□□□□□ -1.06
HMGCL-206ENST00000496907 NRAPQ86VF7 1730 aa8.43□□□□□ -1.06
HMGCL-206ENST00000496907 SPDYE4A6NLX3 237 aa8.42□□□□□ -1.06
HMGCL-206ENST00000496907 HSPA5P11021 654 aaKnown RBP8.42□□□□□ -1.06
HMGCL-206ENST00000496907 FHDC1Q9C0D6 1143 aaPredicted RBP8.42□□□□□ -1.06
HMGCL-206ENST00000496907 RGPD8O14715 1765 aaPredicted RBP8.42□□□□□ -1.06
HMGCL-206ENST00000496907 MYOM1P52179 1685 aa8.41□□□□□ -1.06
HMGCL-206ENST00000496907 FAM83GA6ND36 823 aa8.41□□□□□ -1.06
HMGCL-206ENST00000496907 TRIM37O94972 964 aa8.41□□□□□ -1.06
HMGCL-206ENST00000496907 ZBTB7AO95365 584 aa8.41□□□□□ -1.06
HMGCL-206ENST00000496907 APBA3O96018 575 aa8.41□□□□□ -1.06
HMGCL-206ENST00000496907 NBPF14Q5TI25 921 aa8.41□□□□□ -1.06
HMGCL-206ENST00000496907 HDGFL2Q7Z4V5 671 aaPredicted RBP8.41□□□□□ -1.06
HMGCL-206ENST00000496907 SHANK3Q9BYB0 1731 aa8.4□□□□□ -1.06
HMGCL-206ENST00000496907 DISP2A7MBM2 1401 aa8.4□□□□□ -1.06
HMGCL-206ENST00000496907 ARHGEF10O15013 1369 aa8.4□□□□□ -1.06
HMGCL-206ENST00000496907 SYT17Q9BSW7 474 aa8.4□□□□□ -1.06
HMGCL-206ENST00000496907 PDGFDQ9GZP0 370 aaPredicted RBP8.4□□□□□ -1.06
HMGCL-206ENST00000496907 CABP2Q9NPB3 220 aa8.4□□□□□ -1.06
HMGCL-206ENST00000496907 BTG4Q9NY30 223 aa8.4□□□□□ -1.06
HMGCL-206ENST00000496907 CABP1Q9NZU7 370 aa8.4□□□□□ -1.06
HMGCL-206ENST00000496907 COL14A1Q05707 1796 aaKnown RBP8.4□□□□□ -1.07
HMGCL-206ENST00000496907 GPR162Q16538 588 aa8.39□□□□□ -1.07
HMGCL-206ENST00000496907 TMC1Q8TDI8 760 aa8.39□□□□□ -1.07
HMGCL-206ENST00000496907 THSD7AQ9UPZ6 1657 aa8.39□□□□□ -1.07
HMGCL-206ENST00000496907 TULP4Q9NRJ4 1543 aa8.39□□□□□ -1.07
HMGCL-206ENST00000496907 NUP188Q5SRE5 1749 aa8.38□□□□□ -1.07
HMGCL-206ENST00000496907 ACEP12821 1306 aa8.38□□□□□ -1.07
HMGCL-206ENST00000496907 RREB1Q92766 1687 aa8.38□□□□□ -1.07
HMGCL-206ENST00000496907 PMFBP1Q8TBY8 1022 aa8.38□□□□□ -1.07
HMGCL-206ENST00000496907 SBNO1A3KN83 1393 aa8.37□□□□□ -1.07
HMGCL-206ENST00000496907 POLR3AO14802 1390 aaPredicted RBP8.37□□□□□ -1.07
HMGCL-206ENST00000496907 PARD3Q8TEW0 1356 aa8.37□□□□□ -1.07
HMGCL-206ENST00000496907 TTC21AQ8NDW8 1320 aa8.37□□□□□ -1.07
HMGCL-206ENST00000496907 PRR36Q9H6K5 1346 aa8.37□□□□□ -1.07
HMGCL-206ENST00000496907 ZNF526Q8TF50 670 aaPredicted RBP8.37□□□□□ -1.07
HMGCL-206ENST00000496907 MS4A3Q96HJ5 214 aa8.37□□□□□ -1.07
HMGCL-206ENST00000496907 ARHGEF28Q8N1W1 1705 aaKnown RBP8.37□□□□□ -1.07
HMGCL-206ENST00000496907 PPIP5K1Q6PFW1 1433 aa8.37□□□□□ -1.07
HMGCL-206ENST00000496907 SPATA31A5Q5VU36 1347 aa8.36□□□□□ -1.07
HMGCL-206ENST00000496907 SPATA31A7Q8IWB4 1347 aa8.36□□□□□ -1.07
HMGCL-206ENST00000496907 PTGER2P43116 358 aa8.36□□□□□ -1.07
HMGCL-206ENST00000496907 FAM196AQ6ZSG2 479 aa8.36□□□□□ -1.07
HMGCL-206ENST00000496907 NLRP13Q86W25 1043 aa8.36□□□□□ -1.07
HMGCL-206ENST00000496907 SLC12A5Q9H2X9 1139 aa8.36□□□□□ -1.07
HMGCL-206ENST00000496907 WWC3Q9ULE0 1092 aa8.36□□□□□ -1.07
HMGCL-206ENST00000496907 GOLGB1Q14789 3259 aaKnown RBP8.36□□□□□ -1.07
HMGCL-206ENST00000496907 PAK3O75914 559 aaPredicted RBP8.35□□□□□ -1.07
HMGCL-206ENST00000496907 ATN1P54259 1190 aaPredicted RBP8.35□□□□□ -1.07
HMGCL-206ENST00000496907 PROM2Q8N271 834 aa8.35□□□□□ -1.07
HMGCL-206ENST00000496907 DNAJC5GQ8N7S2 189 aa8.35□□□□□ -1.07
HMGCL-206ENST00000496907 ATP7BP35670 1465 aa8.34□□□□□ -1.07
HMGCL-206ENST00000496907 ABTB2Q8N961 1025 aa8.34□□□□□ -1.07
HMGCL-206ENST00000496907 PRDM11Q9NQV5 511 aa8.34□□□□□ -1.07
HMGCL-206ENST00000496907 CREBZFQ9NS37 354 aa8.34□□□□□ -1.07
HMGCL-206ENST00000496907 USP35Q9P2H5 1018 aa8.34□□□□□ -1.07
HMGCL-206ENST00000496907 TRPM3Q9HCF6 1732 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms