RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 NR3C2P08235 984 aa10.28□□□□□ -0.76
SNX13-211ENST00000496855 MCCD1P59942 119 aaPredicted RBP10.28□□□□□ -0.76
SNX13-211ENST00000496855 VAC14Q08AM6 782 aa10.28□□□□□ -0.76
SNX13-211ENST00000496855 TRAF7Q6Q0C0 670 aa10.28□□□□□ -0.76
SNX13-211ENST00000496855 LCE2BO14633 110 aa10.27□□□□□ -0.77
SNX13-211ENST00000496855 CTC1Q2NKJ3 1217 aa10.27□□□□□ -0.77
SNX13-211ENST00000496855 WWC1Q8IX03 1113 aa10.27□□□□□ -0.77
SNX13-211ENST00000496855 CRIPAKQ8N1N5 446 aa10.27□□□□□ -0.77
SNX13-211ENST00000496855 ZNF592Q92610 1267 aa10.27□□□□□ -0.77
SNX13-211ENST00000496855 SMCPP49901 116 aaPredicted RBP10.26□□□□□ -0.77
SNX13-211ENST00000496855 CLUAP1Q96AJ1 413 aa10.26□□□□□ -0.77
SNX13-211ENST00000496855 EIF4G2P78344 907 aaKnown RBP eCLIP10.25□□□□□ -0.77
SNX13-211ENST00000496855 INTS6LQ5JSJ4 861 aaKnown RBP10.25□□□□□ -0.77
SNX13-211ENST00000496855 ESPNB1AK53 854 aa10.24□□□□□ -0.77
SNX13-211ENST00000496855 AXIN1O15169 862 aa10.24□□□□□ -0.77
SNX13-211ENST00000496855 CCDC116Q8IYX3 515 aa10.24□□□□□ -0.77
SNX13-211ENST00000496855 KLF16Q9BXK1 252 aaPredicted RBP10.24□□□□□ -0.77
SNX13-211ENST00000496855 AAASQ9NRG9 546 aa10.24□□□□□ -0.77
SNX13-211ENST00000496855 ST8SIA5O15466 376 aa10.23□□□□□ -0.77
SNX13-211ENST00000496855 WDR4P57081 412 aaKnown RBP10.23□□□□□ -0.77
SNX13-211ENST00000496855 GIGYF1O75420 1035 aaPredicted RBP10.23□□□□□ -0.77
SNX13-211ENST00000496855 SEPT12Q8IYM1 358 aa10.23□□□□□ -0.77
SNX13-211ENST00000496855 A6NJR5 290 aa10.22□□□□□ -0.77
SNX13-211ENST00000496855 TIMP2P16035 220 aa10.22□□□□□ -0.77
SNX13-211ENST00000496855 DHX9Q08211 1270 aaKnown RBP10.22□□□□□ -0.77
SNX13-211ENST00000496855 PPP1R26Q5T8A7 1209 aaPredicted RBP10.22□□□□□ -0.77
SNX13-211ENST00000496855 CAPN5O15484 640 aaPredicted RBP10.21□□□□□ -0.78
SNX13-211ENST00000496855 RAB15P59190 212 aa10.21□□□□□ -0.78
SNX13-211ENST00000496855 PROSER2Q86WR7 435 aaPredicted RBP10.21□□□□□ -0.78
SNX13-211ENST00000496855 ITPKCQ96DU7 683 aa10.21□□□□□ -0.78
SNX13-211ENST00000496855 EMILIN1Q9Y6C2 1016 aa10.21□□□□□ -0.78
SNX13-211ENST00000496855 ZIC2O95409 532 aaPredicted RBP10.2□□□□□ -0.78
SNX13-211ENST00000496855 SOX11P35716 441 aa10.2□□□□□ -0.78
SNX13-211ENST00000496855 FNBP4Q8N3X1 1017 aaPredicted RBP10.2□□□□□ -0.78
SNX13-211ENST00000496855 CEP126Q9P2H0 1117 aa10.2□□□□□ -0.78
SNX13-211ENST00000496855 ZFAND3Q9H8U3 227 aa10.19□□□□□ -0.78
SNX13-211ENST00000496855 ERVH48-1M5A8F1 160 aa10.18□□□□□ -0.78
SNX13-211ENST00000496855 SEMA3FQ13275 785 aa10.18□□□□□ -0.78
SNX13-211ENST00000496855 RNF20Q5VTR2 975 aa10.18□□□□□ -0.78
SNX13-211ENST00000496855 PGPEP1Q9NXJ5 209 aa10.18□□□□□ -0.78
SNX13-211ENST00000496855 CCDC125Q86Z20 511 aa10.17□□□□□ -0.78
SNX13-211ENST00000496855 DACH1Q9UI36 760 aa10.17□□□□□ -0.78
SNX13-211ENST00000496855 POM121CA8CG34 1229 aa10.17□□□□□ -0.78
SNX13-211ENST00000496855 ALG2Q9H553 416 aa10.16□□□□□ -0.78
SNX13-211ENST00000496855 TMPRSS4Q9NRS4 437 aa10.16□□□□□ -0.78
SNX13-211ENST00000496855 ZNF784Q8NCA9 323 aaPredicted RBP10.14□□□□□ -0.79
SNX13-211ENST00000496855 ATP13A2Q9NQ11 1180 aa10.14□□□□□ -0.79
SNX13-211ENST00000496855 SLFNL1Q499Z3 407 aa10.13□□□□□ -0.79
SNX13-211ENST00000496855 PHTF2Q8N3S3 785 aa10.13□□□□□ -0.79
SNX13-211ENST00000496855 BMP1P13497 986 aa10.12□□□□□ -0.79
SNX13-211ENST00000496855 MEIOBQ8N635 442 aa10.12□□□□□ -0.79
SNX13-211ENST00000496855 ADAMTS19Q8TE59 1207 aa10.12□□□□□ -0.79
SNX13-211ENST00000496855 TRIM52Q96A61 297 aa10.12□□□□□ -0.79
SNX13-211ENST00000496855 PCDHB11Q9Y5F2 797 aa10.12□□□□□ -0.79
SNX13-211ENST00000496855 LILRA1O75019 489 aa10.11□□□□□ -0.79
SNX13-211ENST00000496855 CBLBQ13191 982 aa10.11□□□□□ -0.79
SNX13-211ENST00000496855 Q6ZVU0 165 aa10.11□□□□□ -0.79
SNX13-211ENST00000496855 TRIM46Q7Z4K8 759 aa10.11□□□□□ -0.79
SNX13-211ENST00000496855 RNF135Q8IUD6 432 aa10.11□□□□□ -0.79
SNX13-211ENST00000496855 TRAK2O60296 914 aa10.1□□□□□ -0.79
SNX13-211ENST00000496855 HDGFL1Q5TGJ6 251 aa10.1□□□□□ -0.79
SNX13-211ENST00000496855 MRPL14Q6P1L8 145 aaKnown RBP10.1□□□□□ -0.79
SNX13-211ENST00000496855 CCDC85AQ96PX6 553 aaPredicted RBP10.1□□□□□ -0.79
SNX13-211ENST00000496855 ZMYND15Q9H091 742 aa10.1□□□□□ -0.79
SNX13-211ENST00000496855 CYLDQ9NQC7 956 aa10.1□□□□□ -0.79
SNX13-211ENST00000496855 ADD1P35611 737 aaKnown RBP10.09□□□□□ -0.79
SNX13-211ENST00000496855 ERVK-9P63128 1117 aa10.09□□□□□ -0.79
SNX13-211ENST00000496855 GMPR2Q9P2T1 348 aaKnown RBP10.09□□□□□ -0.79
SNX13-211ENST00000496855 CHIC2Q9UKJ5 165 aa10.09□□□□□ -0.79
SNX13-211ENST00000496855 SCARF1Q14162 830 aa10.08□□□□□ -0.8
SNX13-211ENST00000496855 TSGA10IPQ3SY00 556 aa10.08□□□□□ -0.8
SNX13-211ENST00000496855 PIK3CDO00329 1044 aa10.07□□□□□ -0.8
SNX13-211ENST00000496855 UPP2O95045 317 aa10.07□□□□□ -0.8
SNX13-211ENST00000496855 CC2D2BQ6DHV5 1058 aa10.07□□□□□ -0.8
SNX13-211ENST00000496855 LINC00528Q8N1L1 170 aa10.07□□□□□ -0.8
SNX13-211ENST00000496855 GLMNQ92990 594 aa10.07□□□□□ -0.8
SNX13-211ENST00000496855 TSEN34Q9BSV6 310 aaKnown RBP10.07□□□□□ -0.8
SNX13-211ENST00000496855 CDCA7Q9BWT1 371 aaPredicted RBP10.07□□□□□ -0.8
SNX13-211ENST00000496855 DOLKQ9UPQ8 538 aa10.07□□□□□ -0.8
SNX13-211ENST00000496855 POTECB2RU33 542 aa10.06□□□□□ -0.8
SNX13-211ENST00000496855 ADH1AP07327 375 aa10.06□□□□□ -0.8
SNX13-211ENST00000496855 SCTRP47872 440 aa10.06□□□□□ -0.8
SNX13-211ENST00000496855 ZFP42Q96MM3 310 aa10.06□□□□□ -0.8
SNX13-211ENST00000496855 PURBQ96QR8 312 aaKnown RBP10.06□□□□□ -0.8
SNX13-211ENST00000496855 SENP2Q9HC62 589 aa10.06□□□□□ -0.8
SNX13-211ENST00000496855 MAP7D1Q3KQU3 841 aa10.05□□□□□ -0.8
SNX13-211ENST00000496855 PLPP7Q8NBV4 271 aa10.05□□□□□ -0.8
SNX13-211ENST00000496855 BMP2P12643 396 aa10.04□□□□□ -0.8
SNX13-211ENST00000496855 C6orf118Q5T5N4 469 aa10.04□□□□□ -0.8
SNX13-211ENST00000496855 ZNF787Q6DD87 383 aa10.04□□□□□ -0.8
SNX13-211ENST00000496855 C14orf37Q86TY3 774 aa10.04□□□□□ -0.8
SNX13-211ENST00000496855 NFATC2IPQ8NCF5 419 aa10.04□□□□□ -0.8
SNX13-211ENST00000496855 AGBL1Q96MI9 1066 aa10.04□□□□□ -0.8
SNX13-211ENST00000496855 ZNF777Q9ULD5 760 aaPredicted RBP10.04□□□□□ -0.8
SNX13-211ENST00000496855 KIFC2Q96AC6 838 aa10.04□□□□□ -0.8
SNX13-211ENST00000496855 CALR3Q96L12 384 aaKnown RBP10.04□□□□□ -0.8
SNX13-211ENST00000496855 TRIM47Q96LD4 638 aa10.04□□□□□ -0.8
SNX13-211ENST00000496855 UCN2Q96RP3 112 aa10.04□□□□□ -0.8
SNX13-211ENST00000496855 ESF1Q9H501 851 aaKnown RBP10.04□□□□□ -0.8
SNX13-211ENST00000496855 C11orf95C9JLR9 678 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms