RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 NUP188Q5SRE5 1749 aa20.32■□□□□ 0.84
GAPDH-210ENST00000496049 ABCA3Q99758 1704 aa20.32■□□□□ 0.84
GAPDH-210ENST00000496049 PIK3C2AO00443 1686 aa20.32■□□□□ 0.84
GAPDH-210ENST00000496049 USP54Q70EL1 1684 aa20.32■□□□□ 0.84
GAPDH-210ENST00000496049 RREB1Q92766 1687 aa20.31■□□□□ 0.84
GAPDH-210ENST00000496049 NRAPQ86VF7 1730 aa20.3■□□□□ 0.84
GAPDH-210ENST00000496049 PAK3O75914 559 aaPredicted RBP20.3■□□□□ 0.84
GAPDH-210ENST00000496049 MORC1Q86VD1 984 aa20.3■□□□□ 0.84
GAPDH-210ENST00000496049 KRT28Q7Z3Y7 464 aa20.29■□□□□ 0.84
GAPDH-210ENST00000496049 SBNO1A3KN83 1393 aa20.29■□□□□ 0.84
GAPDH-210ENST00000496049 CHD4Q14839 1912 aa20.29■□□□□ 0.84
GAPDH-210ENST00000496049 MYBBP1AQ9BQG0 1328 aaKnown RBP20.28■□□□□ 0.84
GAPDH-210ENST00000496049 FYB1O15117 783 aa20.28■□□□□ 0.84
GAPDH-210ENST00000496049 NME9Q86XW9 330 aa20.28■□□□□ 0.84
GAPDH-210ENST00000496049 MIER1Q8N108 512 aa20.28■□□□□ 0.84
GAPDH-210ENST00000496049 CABLES1Q8TDN4 633 aa20.28■□□□□ 0.84
GAPDH-210ENST00000496049 COG3Q96JB2 828 aa20.28■□□□□ 0.84
GAPDH-210ENST00000496049 CAMKK2Q96RR4 588 aa20.28■□□□□ 0.84
GAPDH-210ENST00000496049 GGNBP2Q9H3C7 697 aa20.28■□□□□ 0.84
GAPDH-210ENST00000496049 SPATA31A3Q5VYP0 1347 aa20.27■□□□□ 0.84
GAPDH-210ENST00000496049 ALS2Q96Q42 1657 aa20.27■□□□□ 0.84
GAPDH-210ENST00000496049 OVOS2A0A0J9YW53 1432 aa20.27■□□□□ 0.83
GAPDH-210ENST00000496049 TNS3Q68CZ2 1445 aa20.27■□□□□ 0.83
GAPDH-210ENST00000496049 OVOS2Q6IE36 1432 aa20.27■□□□□ 0.83
GAPDH-210ENST00000496049 SPON1Q9HCB6 807 aa20.26■□□□□ 0.83
GAPDH-210ENST00000496049 CEP350Q5VT06 3117 aa20.26■□□□□ 0.83
GAPDH-210ENST00000496049 USP31Q70CQ4 1352 aa20.25■□□□□ 0.83
GAPDH-210ENST00000496049 ABTB2Q8N961 1025 aa20.25■□□□□ 0.83
GAPDH-210ENST00000496049 ARHGEF10O15013 1369 aa20.24■□□□□ 0.83
GAPDH-210ENST00000496049 CCER2I3L3R5 266 aa20.23■□□□□ 0.83
GAPDH-210ENST00000496049 TRIM37O94972 964 aa20.23■□□□□ 0.83
GAPDH-210ENST00000496049 THSD7AQ9UPZ6 1657 aa20.22■□□□□ 0.83
GAPDH-210ENST00000496049 KCNQ2O43526 872 aa20.22■□□□□ 0.83
GAPDH-210ENST00000496049 NLRP13Q86W25 1043 aa20.22■□□□□ 0.83
GAPDH-210ENST00000496049 APBA3O96018 575 aa20.21■□□□□ 0.83
GAPDH-210ENST00000496049 NLRP6P59044 892 aa20.21■□□□□ 0.83
GAPDH-210ENST00000496049 LMOD2Q6P5Q4 547 aa20.21■□□□□ 0.83
GAPDH-210ENST00000496049 PPP2R1AP30153 589 aa20.19■□□□□ 0.82
GAPDH-210ENST00000496049 TNNT2P45379 298 aaPredicted RBP20.19■□□□□ 0.82
GAPDH-210ENST00000496049 FAM83GA6ND36 823 aa20.18■□□□□ 0.82
GAPDH-210ENST00000496049 NBPF14Q5TI25 921 aa20.18■□□□□ 0.82
GAPDH-210ENST00000496049 AATKQ6ZMQ8 1374 aa20.18■□□□□ 0.82
GAPDH-210ENST00000496049 SLIT3O75094 1523 aa20.17■□□□□ 0.82
GAPDH-210ENST00000496049 UTRNP46939 3433 aa20.17■□□□□ 0.82
GAPDH-210ENST00000496049 PHRF1Q9P1Y6 1649 aaKnown RBP20.17■□□□□ 0.82
GAPDH-210ENST00000496049 NUTM2GQ5VZR2 741 aa20.16■□□□□ 0.82
GAPDH-210ENST00000496049 KCNH5Q8NCM2 988 aa20.16■□□□□ 0.82
GAPDH-210ENST00000496049 CFAP53Q96M91 514 aa20.15■□□□□ 0.82
GAPDH-210ENST00000496049 MRS2Q9HD23 443 aa20.15■□□□□ 0.82
GAPDH-210ENST00000496049 BTG4Q9NY30 223 aa20.15■□□□□ 0.82
GAPDH-210ENST00000496049 MAP2P11137 1827 aaKnown RBP20.14■□□□□ 0.81
GAPDH-210ENST00000496049 SMG6Q86US8 1419 aaKnown RBP20.14■□□□□ 0.81
GAPDH-210ENST00000496049 USP19O94966 1318 aa20.14■□□□□ 0.81
GAPDH-210ENST00000496049 CRYBG1Q9Y4K1 1723 aa20.13■□□□□ 0.81
GAPDH-210ENST00000496049 NFAT5O94916 1531 aa20.13■□□□□ 0.81
GAPDH-210ENST00000496049 LTN1O94822 1766 aa20.13■□□□□ 0.81
GAPDH-210ENST00000496049 COL14A1Q05707 1796 aaKnown RBP20.13■□□□□ 0.81
GAPDH-210ENST00000496049 SPATA31A5Q5VU36 1347 aa20.11■□□□□ 0.81
GAPDH-210ENST00000496049 SPATA31A7Q8IWB4 1347 aa20.11■□□□□ 0.81
GAPDH-210ENST00000496049 SOX12O15370 315 aa20.11■□□□□ 0.81
GAPDH-210ENST00000496049 FAM196AQ6ZSG2 479 aa20.11■□□□□ 0.81
GAPDH-210ENST00000496049 CASZ1Q86V15 1759 aa20.1■□□□□ 0.81
GAPDH-210ENST00000496049 RTL1A6NKG5 1358 aa20.09■□□□□ 0.81
GAPDH-210ENST00000496049 KIF24Q5T7B8 1368 aa20.09■□□□□ 0.81
GAPDH-210ENST00000496049 GIGYF1O75420 1035 aaPredicted RBP20.09■□□□□ 0.81
GAPDH-210ENST00000496049 MTHFSP49914 203 aa20.09■□□□□ 0.81
GAPDH-210ENST00000496049 PPM1GO15355 546 aaPredicted RBP20.07■□□□□ 0.8
GAPDH-210ENST00000496049 POLKQ9UBT6 870 aa20.07■□□□□ 0.8
GAPDH-210ENST00000496049 FLT4P35916 1363 aa20.07■□□□□ 0.8
GAPDH-210ENST00000496049 ABCC6O95255 1503 aa20.07■□□□□ 0.8
GAPDH-210ENST00000496049 GCP02774 474 aa20.06■□□□□ 0.8
GAPDH-210ENST00000496049 RRS1Q15050 365 aaKnown RBP20.06■□□□□ 0.8
GAPDH-210ENST00000496049 PEAK1Q9H792 1746 aa20.05■□□□□ 0.8
GAPDH-210ENST00000496049 AMPHP49418 695 aa20.05■□□□□ 0.8
GAPDH-210ENST00000496049 EMILIN1Q9Y6C2 1016 aa20.05■□□□□ 0.8
GAPDH-210ENST00000496049 MAP3K19Q56UN5 1328 aa20.04■□□□□ 0.8
GAPDH-210ENST00000496049 WDR43Q15061 677 aaKnown RBP eCLIP20.04■□□□□ 0.8
GAPDH-210ENST00000496049 COL3A1P02461 1466 aaPredicted RBP20.04■□□□□ 0.8
GAPDH-210ENST00000496049 CCDC184Q52MB2 194 aa20.02■□□□□ 0.8
GAPDH-210ENST00000496049 INSRP06213 1382 aa20.02■□□□□ 0.8
GAPDH-210ENST00000496049 CPDO75976 1380 aa20.01■□□□□ 0.79
GAPDH-210ENST00000496049 ZBTB7CA1YPR0 619 aa20.01■□□□□ 0.79
GAPDH-210ENST00000496049 ZBTB7AO95365 584 aa20.01■□□□□ 0.79
GAPDH-210ENST00000496049 PDGFDQ9GZP0 370 aaPredicted RBP20.01■□□□□ 0.79
GAPDH-210ENST00000496049 NUDCQ9Y266 331 aa20.01■□□□□ 0.79
GAPDH-210ENST00000496049 FBLN1P23142 703 aa20■□□□□ 0.79
GAPDH-210ENST00000496049 DIAPH1O60610 1272 aaKnown RBP19.99■□□□□ 0.79
GAPDH-210ENST00000496049 FHDC1Q9C0D6 1143 aaPredicted RBP19.99■□□□□ 0.79
GAPDH-210ENST00000496049 ANO8Q9HCE9 1232 aaPredicted RBP19.99■□□□□ 0.79
GAPDH-210ENST00000496049 HOXC9P31274 260 aa19.98■□□□□ 0.79
GAPDH-210ENST00000496049 ARHGEF25Q86VW2 580 aa19.98■□□□□ 0.79
GAPDH-210ENST00000496049 SPATA31A1Q5TZJ5 1347 aa19.98■□□□□ 0.79
GAPDH-210ENST00000496049 KIAA0232Q92628 1395 aa19.97■□□□□ 0.79
GAPDH-210ENST00000496049 ZC3H6P61129 1189 aaKnown RBP19.97■□□□□ 0.79
GAPDH-210ENST00000496049 FAM9BQ8IZU0 186 aa19.97■□□□□ 0.79
GAPDH-210ENST00000496049 PNISRQ8TF01 805 aaKnown RBP19.97■□□□□ 0.79
GAPDH-210ENST00000496049 SYT17Q9BSW7 474 aa19.97■□□□□ 0.79
GAPDH-210ENST00000496049 ATF5Q9Y2D1 282 aaPredicted RBP19.97■□□□□ 0.79
GAPDH-210ENST00000496049 FAM208AQ9UK61 1670 aaKnown RBP19.97■□□□□ 0.79
GAPDH-210ENST00000496049 PTGER2P43116 358 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms