RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 RIMBP3Q9UFD9 1639 aa11.71□□□□□ -0.53
EPHA4-213ENST00000495693 ZMYM4Q5VZL5 1548 aa11.71□□□□□ -0.53
EPHA4-213ENST00000495693 COL17A1Q9UMD9 1497 aaPredicted RBP11.71□□□□□ -0.53
EPHA4-213ENST00000495693 C3orf80F5H4A9 247 aa11.71□□□□□ -0.53
EPHA4-213ENST00000495693 TMF1P82094 1093 aa11.71□□□□□ -0.53
EPHA4-213ENST00000495693 RALBP1Q15311 655 aa11.71□□□□□ -0.53
EPHA4-213ENST00000495693 RGL3Q3MIN7 710 aa11.71□□□□□ -0.53
EPHA4-213ENST00000495693 NUDT18Q6ZVK8 323 aa11.71□□□□□ -0.53
EPHA4-213ENST00000495693 ZFRQ96KR1 1074 aaKnown RBP11.71□□□□□ -0.53
EPHA4-213ENST00000495693 PNMA3Q9UL41 463 aa11.71□□□□□ -0.53
EPHA4-213ENST00000495693 ADGRG1Q9Y653 693 aa11.71□□□□□ -0.53
EPHA4-213ENST00000495693 ABCA6Q8N139 1617 aa11.71□□□□□ -0.54
EPHA4-213ENST00000495693 RPGRIP1LQ68CZ1 1315 aa11.7□□□□□ -0.54
EPHA4-213ENST00000495693 ST20-MTHFSA0A0A6YYL1 179 aa11.7□□□□□ -0.54
EPHA4-213ENST00000495693 NEFLP07196 543 aa11.7□□□□□ -0.54
EPHA4-213ENST00000495693 WNT2BQ93097 391 aa11.7□□□□□ -0.54
EPHA4-213ENST00000495693 EYA1Q99502 592 aa11.7□□□□□ -0.54
EPHA4-213ENST00000495693 PPRC1Q5VV67 1664 aaKnown RBP11.7□□□□□ -0.54
EPHA4-213ENST00000495693 SCAF11Q99590 1463 aaKnown RBP11.7□□□□□ -0.54
EPHA4-213ENST00000495693 ARHGAP31Q2M1Z3 1444 aa11.69□□□□□ -0.54
EPHA4-213ENST00000495693 RICTORQ6R327 1708 aa11.69□□□□□ -0.54
EPHA4-213ENST00000495693 C11orf95C9JLR9 678 aaPredicted RBP11.69□□□□□ -0.54
EPHA4-213ENST00000495693 FRMPD1Q5SYB0 1578 aa11.69□□□□□ -0.54
EPHA4-213ENST00000495693 REREQ9P2R6 1566 aa11.69□□□□□ -0.54
EPHA4-213ENST00000495693 DIP2CQ9Y2E4 1556 aa11.69□□□□□ -0.54
EPHA4-213ENST00000495693 ANKK1Q8NFD2 765 aa11.68□□□□□ -0.54
EPHA4-213ENST00000495693 KCTD12Q96CX2 325 aaKnown RBP11.68□□□□□ -0.54
EPHA4-213ENST00000495693 IQGAP1P46940 1657 aa11.68□□□□□ -0.54
EPHA4-213ENST00000495693 DIP2BQ9P265 1576 aa11.67□□□□□ -0.54
EPHA4-213ENST00000495693 ABCC3O15438 1527 aa11.67□□□□□ -0.54
EPHA4-213ENST00000495693 ADGRB3O60242 1522 aa11.67□□□□□ -0.54
EPHA4-213ENST00000495693 THSD4Q6ZMP0 1018 aa11.67□□□□□ -0.54
EPHA4-213ENST00000495693 MRS2Q9HD23 443 aa11.67□□□□□ -0.54
EPHA4-213ENST00000495693 CAMSAP1Q5T5Y3 1602 aa11.67□□□□□ -0.54
EPHA4-213ENST00000495693 SETBP1Q9Y6X0 1596 aa11.67□□□□□ -0.54
EPHA4-213ENST00000495693 SMAPO00193 183 aa11.66□□□□□ -0.54
EPHA4-213ENST00000495693 OATP04181 439 aa11.66□□□□□ -0.54
EPHA4-213ENST00000495693 RBM46Q8TBY0 533 aaKnown RBP11.66□□□□□ -0.54
EPHA4-213ENST00000495693 HCSTQ9UBK5 93 aa11.66□□□□□ -0.54
EPHA4-213ENST00000495693 IFT172Q9UG01 1749 aa11.66□□□□□ -0.54
EPHA4-213ENST00000495693 NRXN1Q9ULB1 1477 aa11.65□□□□□ -0.54
EPHA4-213ENST00000495693 SOWAHBA6NEL2 793 aa11.65□□□□□ -0.54
EPHA4-213ENST00000495693 FECHP22830 423 aa11.65□□□□□ -0.54
EPHA4-213ENST00000495693 BRD4O60885 1362 aaPredicted RBP11.65□□□□□ -0.55
EPHA4-213ENST00000495693 MYBBP1AQ9BQG0 1328 aaKnown RBP11.64□□□□□ -0.55
EPHA4-213ENST00000495693 NPATQ14207 1427 aa11.64□□□□□ -0.55
EPHA4-213ENST00000495693 HNRNPUQ00839 825 aaKnown RBP eCLIP11.64□□□□□ -0.55
EPHA4-213ENST00000495693 POLR3GLQ9BT43 218 aa11.64□□□□□ -0.55
EPHA4-213ENST00000495693 ZBED9Q6R2W3 1325 aa11.63□□□□□ -0.55
EPHA4-213ENST00000495693 SYNMO15061 1565 aa11.63□□□□□ -0.55
EPHA4-213ENST00000495693 MAP2K5Q13163 448 aa11.63□□□□□ -0.55
EPHA4-213ENST00000495693 CYB5RLQ6IPT4 315 aa11.63□□□□□ -0.55
EPHA4-213ENST00000495693 AGLP35573 1532 aa11.63□□□□□ -0.55
EPHA4-213ENST00000495693 INSRP06213 1382 aa11.63□□□□□ -0.55
EPHA4-213ENST00000495693 SBNO2Q9Y2G9 1366 aa11.63□□□□□ -0.55
EPHA4-213ENST00000495693 NOS1P29475 1434 aa11.62□□□□□ -0.55
EPHA4-213ENST00000495693 ERICH6BQ5W0A0 696 aa11.62□□□□□ -0.55
EPHA4-213ENST00000495693 PXYLP1Q8TE99 480 aa11.62□□□□□ -0.55
EPHA4-213ENST00000495693 LRCH3Q96II8 777 aa11.62□□□□□ -0.55
EPHA4-213ENST00000495693 SLC52A1Q9NWF4 448 aa11.62□□□□□ -0.55
EPHA4-213ENST00000495693 DNAJB2P25686 324 aa11.61□□□□□ -0.55
EPHA4-213ENST00000495693 NBPF1Q3BBV0 1214 aa11.61□□□□□ -0.55
EPHA4-213ENST00000495693 GGT6Q6P531 493 aa11.61□□□□□ -0.55
EPHA4-213ENST00000495693 METTL3Q86U44 580 aaKnown RBP11.61□□□□□ -0.55
EPHA4-213ENST00000495693 ZC3H15Q8WU90 426 aaKnown RBP11.61□□□□□ -0.55
EPHA4-213ENST00000495693 TESK2Q96S53 571 aa11.61□□□□□ -0.55
EPHA4-213ENST00000495693 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.61□□□□□ -0.55
EPHA4-213ENST00000495693 PIK3C2BO00750 1634 aa11.6□□□□□ -0.55
EPHA4-213ENST00000495693 MYO3AQ8NEV4 1616 aa11.6□□□□□ -0.55
EPHA4-213ENST00000495693 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.6□□□□□ -0.55
EPHA4-213ENST00000495693 ZMYND10O75800 440 aa11.6□□□□□ -0.55
EPHA4-213ENST00000495693 FAM69CQ0P6D2 419 aa11.6□□□□□ -0.55
EPHA4-213ENST00000495693 NLRP13Q86W25 1043 aa11.6□□□□□ -0.55
EPHA4-213ENST00000495693 TMC1Q8TDI8 760 aa11.6□□□□□ -0.55
EPHA4-213ENST00000495693 MINK1Q8N4C8 1332 aaPredicted RBP11.6□□□□□ -0.55
EPHA4-213ENST00000495693 KDM5AP29375 1690 aaKnown RBP11.59□□□□□ -0.55
EPHA4-213ENST00000495693 PARD3Q8TEW0 1356 aa11.59□□□□□ -0.55
EPHA4-213ENST00000495693 HDGFP51858 240 aaKnown RBP11.59□□□□□ -0.55
EPHA4-213ENST00000495693 SAMD7Q7Z3H4 446 aa11.59□□□□□ -0.55
EPHA4-213ENST00000495693 TMEM134Q9H6X4 195 aa11.59□□□□□ -0.55
EPHA4-213ENST00000495693 ZFYVE9O95405 1425 aa11.59□□□□□ -0.55
EPHA4-213ENST00000495693 PPLO60437 1756 aa11.59□□□□□ -0.55
EPHA4-213ENST00000495693 RAPGEF3O95398 923 aa11.58□□□□□ -0.56
EPHA4-213ENST00000495693 BCAMP50895 628 aa11.58□□□□□ -0.56
EPHA4-213ENST00000495693 FAM161AQ3B820 660 aa11.58□□□□□ -0.56
EPHA4-213ENST00000495693 BARGINQ6ZT62 677 aa11.58□□□□□ -0.56
EPHA4-213ENST00000495693 NYAP1Q6ZVC0 841 aa11.58□□□□□ -0.56
EPHA4-213ENST00000495693 MROH2AA6NES4 1674 aa11.58□□□□□ -0.56
EPHA4-213ENST00000495693 NPC1L1Q9UHC9 1359 aa11.57□□□□□ -0.56
EPHA4-213ENST00000495693 RCCD1A6NED2 376 aa11.57□□□□□ -0.56
EPHA4-213ENST00000495693 IRF6O14896 467 aa11.57□□□□□ -0.56
EPHA4-213ENST00000495693 TSR3Q9UJK0 312 aaKnown RBP11.57□□□□□ -0.56
EPHA4-213ENST00000495693 SUPT16HQ9Y5B9 1047 aaKnown RBP11.57□□□□□ -0.56
EPHA4-213ENST00000495693 PIK3C2GO75747 1445 aa11.57□□□□□ -0.56
EPHA4-213ENST00000495693 FAM9BQ8IZU0 186 aa11.56□□□□□ -0.56
EPHA4-213ENST00000495693 NECTIN2Q92692 538 aa11.56□□□□□ -0.56
EPHA4-213ENST00000495693 PUS7Q96PZ0 661 aaKnown RBP11.56□□□□□ -0.56
EPHA4-213ENST00000495693 DISP3Q9P2K9 1392 aa11.55□□□□□ -0.56
EPHA4-213ENST00000495693 UGGT1Q9NYU2 1555 aa11.55□□□□□ -0.56
EPHA4-213ENST00000495693 SWT1Q5T5J6 900 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms