RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 PLA2R1Q13018 1463 aa14.78□□□□□ -0.04
RAB11FIP3-211ENST00000495663 A0A0G2JS52 829 aa14.78□□□□□ -0.04
RAB11FIP3-211ENST00000495663 NBPF26B4DH59 902 aa14.78□□□□□ -0.04
RAB11FIP3-211ENST00000495663 SAMD7Q7Z3H4 446 aa14.78□□□□□ -0.04
RAB11FIP3-211ENST00000495663 ARHGEF1Q92888 912 aaKnown RBP14.78□□□□□ -0.04
RAB11FIP3-211ENST00000495663 TATDN2Q93075 761 aa14.78□□□□□ -0.04
RAB11FIP3-211ENST00000495663 UBR1Q8IWV7 1749 aa14.78□□□□□ -0.04
RAB11FIP3-211ENST00000495663 CCDC144AA2RUR9 1427 aa14.76□□□□□ -0.05
RAB11FIP3-211ENST00000495663 MYO5BQ9ULV0 1848 aa14.76□□□□□ -0.05
RAB11FIP3-211ENST00000495663 IDI1Q13907 227 aa14.76□□□□□ -0.05
RAB11FIP3-211ENST00000495663 NUDT18Q6ZVK8 323 aa14.76□□□□□ -0.05
RAB11FIP3-211ENST00000495663 ADGRB3O60242 1522 aa14.76□□□□□ -0.05
RAB11FIP3-211ENST00000495663 ANKRD30BQ9BXX2 1392 aa14.75□□□□□ -0.05
RAB11FIP3-211ENST00000495663 ITGBL1O95965 494 aaPredicted RBP14.75□□□□□ -0.05
RAB11FIP3-211ENST00000495663 NYAP1Q6ZVC0 841 aa14.75□□□□□ -0.05
RAB11FIP3-211ENST00000495663 LMTK3Q96Q04 1460 aa14.75□□□□□ -0.05
RAB11FIP3-211ENST00000495663 TMEM131LA2VDJ0 1609 aa14.74□□□□□ -0.05
RAB11FIP3-211ENST00000495663 PADI6Q6TGC4 694 aa14.74□□□□□ -0.05
RAB11FIP3-211ENST00000495663 NPDC1Q9NQX5 325 aaPredicted RBP14.74□□□□□ -0.05
RAB11FIP3-211ENST00000495663 RNF40O75150 1001 aa14.71□□□□□ -0.05
RAB11FIP3-211ENST00000495663 PPP4CP60510 307 aa14.71□□□□□ -0.05
RAB11FIP3-211ENST00000495663 THEMISQ8N1K5 641 aaPredicted RBP14.7□□□□□ -0.06
RAB11FIP3-211ENST00000495663 RBM27Q9P2N5 1060 aaKnown RBP14.7□□□□□ -0.06
RAB11FIP3-211ENST00000495663 NEURL4Q96JN8 1562 aa14.69□□□□□ -0.06
RAB11FIP3-211ENST00000495663 POLR1AO95602 1720 aaPredicted RBP14.69□□□□□ -0.06
RAB11FIP3-211ENST00000495663 SLIT1O75093 1534 aa14.67□□□□□ -0.06
RAB11FIP3-211ENST00000495663 KCNC4Q03721 635 aa14.67□□□□□ -0.06
RAB11FIP3-211ENST00000495663 HSPA2P54652 639 aa14.66□□□□□ -0.06
RAB11FIP3-211ENST00000495663 TTC13Q8NBP0 860 aa14.66□□□□□ -0.06
RAB11FIP3-211ENST00000495663 CCER1Q8TC90 406 aaPredicted RBP14.66□□□□□ -0.06
RAB11FIP3-211ENST00000495663 SPATA31E1Q6ZUB1 1445 aa14.66□□□□□ -0.06
RAB11FIP3-211ENST00000495663 CLSPNQ9HAW4 1339 aa14.66□□□□□ -0.06
RAB11FIP3-211ENST00000495663 PPLO60437 1756 aa14.65□□□□□ -0.06
RAB11FIP3-211ENST00000495663 ARHGAP23Q9P227 1491 aa14.65□□□□□ -0.06
RAB11FIP3-211ENST00000495663 TMEM2Q9UHN6 1383 aa14.65□□□□□ -0.06
RAB11FIP3-211ENST00000495663 ZNF326Q5BKZ1 582 aaKnown RBP14.65□□□□□ -0.06
RAB11FIP3-211ENST00000495663 IFT172Q9UG01 1749 aa14.65□□□□□ -0.06
RAB11FIP3-211ENST00000495663 STRCQ7RTU9 1775 aa14.63□□□□□ -0.07
RAB11FIP3-211ENST00000495663 NEXMIFQ5QGS0 1516 aa14.63□□□□□ -0.07
RAB11FIP3-211ENST00000495663 HDGFP51858 240 aaKnown RBP14.63□□□□□ -0.07
RAB11FIP3-211ENST00000495663 PLCB2Q00722 1185 aa14.63□□□□□ -0.07
RAB11FIP3-211ENST00000495663 SIN3AQ96ST3 1273 aa14.63□□□□□ -0.07
RAB11FIP3-211ENST00000495663 RIMS2Q9UQ26 1411 aa14.63□□□□□ -0.07
RAB11FIP3-211ENST00000495663 ZFYVE9O95405 1425 aa14.62□□□□□ -0.07
RAB11FIP3-211ENST00000495663 NEUROD1Q13562 356 aa14.62□□□□□ -0.07
RAB11FIP3-211ENST00000495663 RGL3Q3MIN7 710 aa14.62□□□□□ -0.07
RAB11FIP3-211ENST00000495663 ANKLE2Q86XL3 938 aa14.62□□□□□ -0.07
RAB11FIP3-211ENST00000495663 EID1Q9Y6B2 187 aa14.62□□□□□ -0.07
RAB11FIP3-211ENST00000495663 SCAF11Q99590 1463 aaKnown RBP14.62□□□□□ -0.07
RAB11FIP3-211ENST00000495663 RPGRIP1LQ68CZ1 1315 aa14.62□□□□□ -0.07
RAB11FIP3-211ENST00000495663 SEMA3EO15041 775 aa14.61□□□□□ -0.07
RAB11FIP3-211ENST00000495663 RGS20O76081 388 aa14.61□□□□□ -0.07
RAB11FIP3-211ENST00000495663 SWT1Q5T5J6 900 aaKnown RBP14.61□□□□□ -0.07
RAB11FIP3-211ENST00000495663 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.61□□□□□ -0.07
RAB11FIP3-211ENST00000495663 NUTM2FA1L443 756 aa14.6□□□□□ -0.07
RAB11FIP3-211ENST00000495663 TXNDC2Q86VQ3 553 aa14.6□□□□□ -0.07
RAB11FIP3-211ENST00000495663 IQGAP1P46940 1657 aa14.59□□□□□ -0.07
RAB11FIP3-211ENST00000495663 PPP1R15AO75807 674 aaPredicted RBP14.59□□□□□ -0.07
RAB11FIP3-211ENST00000495663 LTKP29376 864 aa14.58□□□□□ -0.08
RAB11FIP3-211ENST00000495663 PTGDRQ13258 359 aa14.58□□□□□ -0.08
RAB11FIP3-211ENST00000495663 MED14O60244 1454 aa14.57□□□□□ -0.08
RAB11FIP3-211ENST00000495663 APLP1P51693 650 aa14.56□□□□□ -0.08
RAB11FIP3-211ENST00000495663 TJAP1Q5JTD0 557 aa14.56□□□□□ -0.08
RAB11FIP3-211ENST00000495663 NUTM2DQ5VT03 806 aaPredicted RBP14.56□□□□□ -0.08
RAB11FIP3-211ENST00000495663 TONSLQ96HA7 1378 aa14.56□□□□□ -0.08
RAB11FIP3-211ENST00000495663 NPHP4O75161 1426 aaPredicted RBP14.56□□□□□ -0.08
RAB11FIP3-211ENST00000495663 MYOM2P54296 1465 aa14.56□□□□□ -0.08
RAB11FIP3-211ENST00000495663 DCAF11Q8TEB1 546 aa14.55□□□□□ -0.08
RAB11FIP3-211ENST00000495663 EYA1Q99502 592 aa14.55□□□□□ -0.08
RAB11FIP3-211ENST00000495663 MTRQ99707 1265 aa14.55□□□□□ -0.08
RAB11FIP3-211ENST00000495663 PLEKHG1Q9ULL1 1385 aa14.55□□□□□ -0.08
RAB11FIP3-211ENST00000495663 FAM161AQ3B820 660 aa14.54□□□□□ -0.08
RAB11FIP3-211ENST00000495663 SETBP1Q9Y6X0 1596 aa14.54□□□□□ -0.08
RAB11FIP3-211ENST00000495663 BCANQ96GW7 911 aa14.53□□□□□ -0.08
RAB11FIP3-211ENST00000495663 NRXN3Q9Y4C0 1643 aa14.52□□□□□ -0.08
RAB11FIP3-211ENST00000495663 DIP2AQ14689 1571 aa14.52□□□□□ -0.08
RAB11FIP3-211ENST00000495663 L3MBTL2Q969R5 705 aa14.52□□□□□ -0.09
RAB11FIP3-211ENST00000495663 IRX2Q9BZI1 471 aaPredicted RBP14.52□□□□□ -0.09
RAB11FIP3-211ENST00000495663 KDM2AQ9Y2K7 1162 aa14.52□□□□□ -0.09
RAB11FIP3-211ENST00000495663 LAMC1P11047 1609 aa14.52□□□□□ -0.09
RAB11FIP3-211ENST00000495663 NRXN1Q9ULB1 1477 aa14.51□□□□□ -0.09
RAB11FIP3-211ENST00000495663 ADGRF5Q8IZF2 1346 aa14.51□□□□□ -0.09
RAB11FIP3-211ENST00000495663 PIK3C2GO75747 1445 aa14.5□□□□□ -0.09
RAB11FIP3-211ENST00000495663 SLF2Q8IX21 1173 aa14.5□□□□□ -0.09
RAB11FIP3-211ENST00000495663 ZNF516Q92618 1163 aa14.5□□□□□ -0.09
RAB11FIP3-211ENST00000495663 TIMELESSQ9UNS1 1208 aa14.5□□□□□ -0.09
RAB11FIP3-211ENST00000495663 SETD1AO15047 1707 aaKnown RBP14.49□□□□□ -0.09
RAB11FIP3-211ENST00000495663 HAP1P54257 671 aaPredicted RBP14.49□□□□□ -0.09
RAB11FIP3-211ENST00000495663 IL21Q9HBE4 155 aa14.49□□□□□ -0.09
RAB11FIP3-211ENST00000495663 ADAMTS13Q76LX8 1427 aa14.49□□□□□ -0.09
RAB11FIP3-211ENST00000495663 ALKQ9UM73 1620 aa14.48□□□□□ -0.09
RAB11FIP3-211ENST00000495663 ADGRG1Q9Y653 693 aa14.48□□□□□ -0.09
RAB11FIP3-211ENST00000495663 KIAA1210Q9ULL0 1709 aa14.48□□□□□ -0.09
RAB11FIP3-211ENST00000495663 SLC26A8Q96RN1 970 aa14.47□□□□□ -0.09
RAB11FIP3-211ENST00000495663 CHD2O14647 1828 aaKnown RBP14.46□□□□□ -0.09
RAB11FIP3-211ENST00000495663 COPS2P61201 443 aa14.46□□□□□ -0.09
RAB11FIP3-211ENST00000495663 TBX22Q9Y458 520 aa14.46□□□□□ -0.09
RAB11FIP3-211ENST00000495663 PRAG1Q86YV5 1406 aa14.46□□□□□ -0.09
RAB11FIP3-211ENST00000495663 FCHSD2O94868 740 aa14.45□□□□□ -0.1
RAB11FIP3-211ENST00000495663 RBM46Q8TBY0 533 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms