RNA–Protein interactions for RNA: ENST00000495658.2

HMGN2P46-205, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

TSL 1 (best)

Gene HMGN2P46, Length 922 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-205ENST00000495658 NR1H3Q13133 447 aa8.35□□□□□ -1.07
HMGN2P46-205ENST00000495658 ARID5BQ14865 1188 aa8.35□□□□□ -1.07
HMGN2P46-205ENST00000495658 PCDHB9Q9Y5E1 797 aa8.35□□□□□ -1.07
HMGN2P46-205ENST00000495658 SMPD1P17405 629 aa8.34□□□□□ -1.07
HMGN2P46-205ENST00000495658 C1QTNF2Q9BXJ5 285 aa8.34□□□□□ -1.07
HMGN2P46-205ENST00000495658 SIAH2O43255 324 aa8.33□□□□□ -1.08
HMGN2P46-205ENST00000495658 VARSP26640 1264 aaKnown RBP8.33□□□□□ -1.08
HMGN2P46-205ENST00000495658 FNBP4Q8N3X1 1017 aaPredicted RBP8.33□□□□□ -1.08
HMGN2P46-205ENST00000495658 FAM174AQ8TBP5 190 aa8.33□□□□□ -1.08
HMGN2P46-205ENST00000495658 ZMYND15Q9H091 742 aa8.33□□□□□ -1.08
HMGN2P46-205ENST00000495658 CCDC180Q9P1Z9 1646 aa8.32□□□□□ -1.08
HMGN2P46-205ENST00000495658 A6NJR5 290 aa8.32□□□□□ -1.08
HMGN2P46-205ENST00000495658 C11orf95C9JLR9 678 aaPredicted RBP8.32□□□□□ -1.08
HMGN2P46-205ENST00000495658 J3QL48 77 aa8.32□□□□□ -1.08
HMGN2P46-205ENST00000495658 CTC1Q2NKJ3 1217 aa8.32□□□□□ -1.08
HMGN2P46-205ENST00000495658 ZNF330Q9Y3S2 320 aaPredicted RBP8.32□□□□□ -1.08
HMGN2P46-205ENST00000495658 GPSM3Q9Y4H4 160 aa8.32□□□□□ -1.08
HMGN2P46-205ENST00000495658 TTC24A2A3L6 582 aaPredicted RBP8.31□□□□□ -1.08
HMGN2P46-205ENST00000495658 ALDH1A1P00352 501 aa8.31□□□□□ -1.08
HMGN2P46-205ENST00000495658 RAB15P59190 212 aa8.31□□□□□ -1.08
HMGN2P46-205ENST00000495658 LCE2CQ5TA81 110 aa8.31□□□□□ -1.08
HMGN2P46-205ENST00000495658 ADAMTS19Q8TE59 1207 aa8.31□□□□□ -1.08
HMGN2P46-205ENST00000495658 SLC10A4Q96EP9 437 aa8.31□□□□□ -1.08
HMGN2P46-205ENST00000495658 ZNF777Q9ULD5 760 aaPredicted RBP8.31□□□□□ -1.08
HMGN2P46-205ENST00000495658 ARID3CA6NKF2 412 aa8.3□□□□□ -1.08
HMGN2P46-205ENST00000495658 TRAK2O60296 914 aa8.3□□□□□ -1.08
HMGN2P46-205ENST00000495658 DZIP3Q86Y13 1208 aaKnown RBP8.3□□□□□ -1.08
HMGN2P46-205ENST00000495658 SNIP1Q8TAD8 396 aaKnown RBP8.3□□□□□ -1.08
HMGN2P46-205ENST00000495658 VASH1Q7L8A9 365 aaPredicted RBP8.29□□□□□ -1.08
HMGN2P46-205ENST00000495658 SNRPBP14678 240 aaKnown RBP8.28□□□□□ -1.08
HMGN2P46-205ENST00000495658 FSHRP23945 695 aa8.28□□□□□ -1.08
HMGN2P46-205ENST00000495658 WASHC4Q2M389 1173 aa8.28□□□□□ -1.08
HMGN2P46-205ENST00000495658 WWC1Q8IX03 1113 aa8.28□□□□□ -1.08
HMGN2P46-205ENST00000495658 TRMT44Q8IYL2 757 aaKnown RBP8.28□□□□□ -1.08
HMGN2P46-205ENST00000495658 GIGYF1O75420 1035 aaPredicted RBP8.27□□□□□ -1.09
HMGN2P46-205ENST00000495658 ATP13A2Q9NQ11 1180 aa8.27□□□□□ -1.09
HMGN2P46-205ENST00000495658 SUPT5HO00267 1087 aaKnown RBP8.26□□□□□ -1.09
HMGN2P46-205ENST00000495658 NR3C2P08235 984 aa8.26□□□□□ -1.09
HMGN2P46-205ENST00000495658 GRM5P41594 1212 aa8.26□□□□□ -1.09
HMGN2P46-205ENST00000495658 EIF4G2P78344 907 aaKnown RBP eCLIP8.26□□□□□ -1.09
HMGN2P46-205ENST00000495658 HPS1Q92902 700 aa8.26□□□□□ -1.09
HMGN2P46-205ENST00000495658 KCTD15Q96SI1 283 aaPredicted RBP8.26□□□□□ -1.09
HMGN2P46-205ENST00000495658 PIK3CDO00329 1044 aa8.25□□□□□ -1.09
HMGN2P46-205ENST00000495658 ADH1CP00326 375 aa8.25□□□□□ -1.09
HMGN2P46-205ENST00000495658 SEMA3FQ13275 785 aa8.25□□□□□ -1.09
HMGN2P46-205ENST00000495658 HDGFL1Q5TGJ6 251 aa8.25□□□□□ -1.09
HMGN2P46-205ENST00000495658 GLMNQ92990 594 aa8.25□□□□□ -1.09
HMGN2P46-205ENST00000495658 CDK15Q96Q40 435 aa8.25□□□□□ -1.09
HMGN2P46-205ENST00000495658 WASF2Q9Y6W5 498 aa8.25□□□□□ -1.09
HMGN2P46-205ENST00000495658 NNTQ13423 1086 aa8.24□□□□□ -1.09
HMGN2P46-205ENST00000495658 INTS6LQ5JSJ4 861 aaKnown RBP8.24□□□□□ -1.09
HMGN2P46-205ENST00000495658 ALG2Q9H553 416 aa8.24□□□□□ -1.09
HMGN2P46-205ENST00000495658 C1orf115Q9H7X2 142 aa8.23□□□□□ -1.09
HMGN2P46-205ENST00000495658 CEP126Q9P2H0 1117 aa8.23□□□□□ -1.09
HMGN2P46-205ENST00000495658 MAP4K5Q9Y4K4 846 aa8.23□□□□□ -1.09
HMGN2P46-205ENST00000495658 NBPF20Q3BBV1 942 aa8.22□□□□□ -1.09
HMGN2P46-205ENST00000495658 TSGA10IPQ3SY00 556 aa8.22□□□□□ -1.09
HMGN2P46-205ENST00000495658 TMPRSS4Q9NRS4 437 aa8.22□□□□□ -1.09
HMGN2P46-205ENST00000495658 TERTO14746 1132 aaKnown RBP8.21□□□□□ -1.1
HMGN2P46-205ENST00000495658 CALR3Q96L12 384 aaKnown RBP8.21□□□□□ -1.1
HMGN2P46-205ENST00000495658 TRIM47Q96LD4 638 aa8.21□□□□□ -1.1
HMGN2P46-205ENST00000495658 UCN2Q96RP3 112 aa8.21□□□□□ -1.1
HMGN2P46-205ENST00000495658 ESPNB1AK53 854 aa8.2□□□□□ -1.1
HMGN2P46-205ENST00000495658 ERVH48-1M5A8F1 160 aa8.2□□□□□ -1.1
HMGN2P46-205ENST00000495658 MPNDQ8N594 471 aa8.2□□□□□ -1.1
HMGN2P46-205ENST00000495658 CCDC85AQ96PX6 553 aaPredicted RBP8.2□□□□□ -1.1
HMGN2P46-205ENST00000495658 ZFAND3Q9H8U3 227 aa8.2□□□□□ -1.1
HMGN2P46-205ENST00000495658 PPP1R26Q5T8A7 1209 aaPredicted RBP8.19□□□□□ -1.1
HMGN2P46-205ENST00000495658 RNF135Q8IUD6 432 aa8.19□□□□□ -1.1
HMGN2P46-205ENST00000495658 CCDC116Q8IYX3 515 aa8.19□□□□□ -1.1
HMGN2P46-205ENST00000495658 ITPKCQ96DU7 683 aa8.19□□□□□ -1.1
HMGN2P46-205ENST00000495658 CDCA7Q9BWT1 371 aaPredicted RBP8.19□□□□□ -1.1
HMGN2P46-205ENST00000495658 SOX11P35716 441 aa8.18□□□□□ -1.1
HMGN2P46-205ENST00000495658 WDR4P57081 412 aaKnown RBP8.18□□□□□ -1.1
HMGN2P46-205ENST00000495658 NR5A1Q13285 461 aa8.18□□□□□ -1.1
HMGN2P46-205ENST00000495658 SLFNL1Q499Z3 407 aa8.18□□□□□ -1.1
HMGN2P46-205ENST00000495658 CYLDQ9NQC7 956 aa8.18□□□□□ -1.1
HMGN2P46-205ENST00000495658 CDV3Q9UKY7 258 aaKnown RBP8.18□□□□□ -1.1
HMGN2P46-205ENST00000495658 PCDHB11Q9Y5F2 797 aa8.18□□□□□ -1.1
HMGN2P46-205ENST00000495658 TBC1D9Q6ZT07 1266 aa8.17□□□□□ -1.1
HMGN2P46-205ENST00000495658 DEPDC4Q8N2C3 294 aa8.17□□□□□ -1.1
HMGN2P46-205ENST00000495658 PHTF2Q8N3S3 785 aa8.17□□□□□ -1.1
HMGN2P46-205ENST00000495658 ZNF784Q8NCA9 323 aaPredicted RBP8.17□□□□□ -1.1
HMGN2P46-205ENST00000495658 ABCC9O60706 1549 aa8.17□□□□□ -1.1
HMGN2P46-205ENST00000495658 ZIC2O95409 532 aaPredicted RBP8.16□□□□□ -1.1
HMGN2P46-205ENST00000495658 SKIP12755 728 aa8.16□□□□□ -1.1
HMGN2P46-205ENST00000495658 TIMP2P16035 220 aa8.16□□□□□ -1.1
HMGN2P46-205ENST00000495658 SCTRP47872 440 aa8.16□□□□□ -1.1
HMGN2P46-205ENST00000495658 CBLBQ13191 982 aa8.16□□□□□ -1.1
HMGN2P46-205ENST00000495658 ZSCAN1Q8NBB4 408 aa8.16□□□□□ -1.1
HMGN2P46-205ENST00000495658 KLF16Q9BXK1 252 aaPredicted RBP8.16□□□□□ -1.1
HMGN2P46-205ENST00000495658 BCL11AQ9H165 835 aa8.16□□□□□ -1.1
HMGN2P46-205ENST00000495658 SENP2Q9HC62 589 aa8.16□□□□□ -1.1
HMGN2P46-205ENST00000495658 OXLD1Q5BKU9 147 aa8.15□□□□□ -1.1
HMGN2P46-205ENST00000495658 MCCD1P59942 119 aaPredicted RBP8.14□□□□□ -1.11
HMGN2P46-205ENST00000495658 PLPP7Q8NBV4 271 aa8.14□□□□□ -1.11
HMGN2P46-205ENST00000495658 DOLKQ9UPQ8 538 aa8.14□□□□□ -1.11
HMGN2P46-205ENST00000495658 BMP1P13497 986 aa8.13□□□□□ -1.11
HMGN2P46-205ENST00000495658 TRIM46Q7Z4K8 759 aa8.13□□□□□ -1.11
HMGN2P46-205ENST00000495658 SEPT12Q8IYM1 358 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms