RNA–Protein interactions for RNA: ENST00000494727.1

ACSS2-223, Transcript of acyl-CoA synthetase short chain family member 2, human

TSL 2

Gene ACSS2, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSS2-223	ENST00000494727	PLEKHG3	A1L390	1219 aa		13.99	□□□□□ -0.17
ACSS2-223	ENST00000494727	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.99	□□□□□ -0.17
ACSS2-223	ENST00000494727	TRPC5	Q9UL62	973 aa	Predicted RBP	13.99	□□□□□ -0.17
ACSS2-223	ENST00000494727	BCL9L	Q86UU0	1499 aa		13.99	□□□□□ -0.17
ACSS2-223	ENST00000494727	ATRN	O75882	1429 aa		13.98	□□□□□ -0.17
ACSS2-223	ENST00000494727	RBM6	P78332	1123 aa	Known RBP	13.98	□□□□□ -0.17
ACSS2-223	ENST00000494727	CCDC9	Q9Y3X0	531 aa	Known RBP	13.98	□□□□□ -0.17
ACSS2-223	ENST00000494727	PLCH1	Q4KWH8	1693 aa		13.98	□□□□□ -0.17
ACSS2-223	ENST00000494727	SLIT2	O94813	1529 aa		13.97	□□□□□ -0.17
ACSS2-223	ENST00000494727	ZBTB7C	A1YPR0	619 aa		13.97	□□□□□ -0.17
ACSS2-223	ENST00000494727	ABTB2	Q8N961	1025 aa		13.97	□□□□□ -0.17
ACSS2-223	ENST00000494727	USP6	P35125	1406 aa		13.97	□□□□□ -0.17
ACSS2-223	ENST00000494727	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.97	□□□□□ -0.17
ACSS2-223	ENST00000494727	ATAD2	Q6PL18	1390 aa		13.96	□□□□□ -0.17
ACSS2-223	ENST00000494727	CLSPN	Q9HAW4	1339 aa		13.96	□□□□□ -0.17
ACSS2-223	ENST00000494727	CRYBG1	Q9Y4K1	1723 aa		13.96	□□□□□ -0.17
ACSS2-223	ENST00000494727	ST20-MTHFS	A0A0A6YYL1	179 aa		13.96	□□□□□ -0.17
ACSS2-223	ENST00000494727	PDAP1	Q13442	181 aa	Known RBP	13.96	□□□□□ -0.17
ACSS2-223	ENST00000494727	UNC5CL	Q8IV45	518 aa		13.96	□□□□□ -0.17
ACSS2-223	ENST00000494727	TMC1	Q8TDI8	760 aa		13.96	□□□□□ -0.17
ACSS2-223	ENST00000494727	USP47	Q96K76	1375 aa		13.96	□□□□□ -0.18
ACSS2-223	ENST00000494727	FAM83G	A6ND36	823 aa		13.95	□□□□□ -0.18
ACSS2-223	ENST00000494727	ZC3H6	P61129	1189 aa	Known RBP	13.95	□□□□□ -0.18
ACSS2-223	ENST00000494727	CHRNA2	Q15822	529 aa		13.95	□□□□□ -0.18
ACSS2-223	ENST00000494727	PRDM11	Q9NQV5	511 aa		13.95	□□□□□ -0.18
ACSS2-223	ENST00000494727	KIAA0232	Q92628	1395 aa		13.95	□□□□□ -0.18
ACSS2-223	ENST00000494727	SBNO2	Q9Y2G9	1366 aa		13.95	□□□□□ -0.18
ACSS2-223	ENST00000494727	TIE1	P35590	1138 aa		13.94	□□□□□ -0.18
ACSS2-223	ENST00000494727	NRK	Q7Z2Y5	1582 aa		13.94	□□□□□ -0.18
ACSS2-223	ENST00000494727	BTG4	Q9NY30	223 aa		13.94	□□□□□ -0.18
ACSS2-223	ENST00000494727	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.93	□□□□□ -0.18
ACSS2-223	ENST00000494727	SOX12	O15370	315 aa		13.93	□□□□□ -0.18
ACSS2-223	ENST00000494727	PSEN1	P49768	467 aa		13.93	□□□□□ -0.18
ACSS2-223	ENST00000494727	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.93	□□□□□ -0.18
ACSS2-223	ENST00000494727	GLI3	P10071	1580 aa		13.92	□□□□□ -0.18
ACSS2-223	ENST00000494727		A0A0G2JS52	829 aa		13.92	□□□□□ -0.18
ACSS2-223	ENST00000494727	MYT1	Q01538	1121 aa		13.92	□□□□□ -0.18
ACSS2-223	ENST00000494727	GJD4	Q96KN9	370 aa	Predicted RBP	13.92	□□□□□ -0.18
ACSS2-223	ENST00000494727	TAOK2	Q9UL54	1235 aa		13.92	□□□□□ -0.18
ACSS2-223	ENST00000494727	KTN1	Q86UP2	1357 aa	Known RBP	13.92	□□□□□ -0.18
ACSS2-223	ENST00000494727	COL14A1	Q05707	1796 aa	Known RBP	13.91	□□□□□ -0.18
ACSS2-223	ENST00000494727	NRAP	Q86VF7	1730 aa		13.91	□□□□□ -0.18
ACSS2-223	ENST00000494727	NLRP6	P59044	892 aa		13.91	□□□□□ -0.18
ACSS2-223	ENST00000494727	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
ACSS2-223	ENST00000494727	TESK2	Q96S53	571 aa		13.91	□□□□□ -0.18
ACSS2-223	ENST00000494727	STRN4	Q9NRL3	753 aa		13.91	□□□□□ -0.18
ACSS2-223	ENST00000494727	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.91	□□□□□ -0.18
ACSS2-223	ENST00000494727	PIK3C2A	O00443	1686 aa		13.91	□□□□□ -0.18
ACSS2-223	ENST00000494727	USP19	O94966	1318 aa		13.9	□□□□□ -0.18
ACSS2-223	ENST00000494727	TTC21B	Q7Z4L5	1316 aa		13.9	□□□□□ -0.18
ACSS2-223	ENST00000494727	NLRP13	Q86W25	1043 aa		13.9	□□□□□ -0.18
ACSS2-223	ENST00000494727	DCBLD2	Q96PD2	775 aa		13.9	□□□□□ -0.18
ACSS2-223	ENST00000494727	SLC12A5	Q9H2X9	1139 aa		13.9	□□□□□ -0.18
ACSS2-223	ENST00000494727	AKAP12	Q02952	1782 aa		13.9	□□□□□ -0.18
ACSS2-223	ENST00000494727	NWD2	Q9ULI1	1742 aa		13.9	□□□□□ -0.18
ACSS2-223	ENST00000494727	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.89	□□□□□ -0.19
ACSS2-223	ENST00000494727	VPS72	Q15906	364 aa		13.89	□□□□□ -0.19
ACSS2-223	ENST00000494727	ZFP91	Q96JP5	570 aa	Predicted RBP	13.89	□□□□□ -0.19
ACSS2-223	ENST00000494727	TMEM106C	Q9BVX2	250 aa		13.89	□□□□□ -0.19
ACSS2-223	ENST00000494727	CPSF1	Q10570	1443 aa	Known RBP	13.89	□□□□□ -0.19
ACSS2-223	ENST00000494727	CD163L1	Q9NR16	1453 aa		13.88	□□□□□ -0.19
ACSS2-223	ENST00000494727		A0A1W2PP64	1363 aa		13.88	□□□□□ -0.19
ACSS2-223	ENST00000494727	TTLL13P	A6NNM8	815 aa		13.88	□□□□□ -0.19
ACSS2-223	ENST00000494727	ASTL	Q6HA08	431 aa	Predicted RBP	13.88	□□□□□ -0.19
ACSS2-223	ENST00000494727	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.88	□□□□□ -0.19
ACSS2-223	ENST00000494727	TIMELESS	Q9UNS1	1208 aa		13.88	□□□□□ -0.19
ACSS2-223	ENST00000494727	SSH2	Q76I76	1423 aa		13.88	□□□□□ -0.19
ACSS2-223	ENST00000494727	BRD4	O60885	1362 aa	Predicted RBP	13.87	□□□□□ -0.19
ACSS2-223	ENST00000494727	GC	P02774	474 aa		13.87	□□□□□ -0.19
ACSS2-223	ENST00000494727	POTEI	P0CG38	1075 aa		13.87	□□□□□ -0.19
ACSS2-223	ENST00000494727	TMF1	P82094	1093 aa		13.87	□□□□□ -0.19
ACSS2-223	ENST00000494727	FAM98C	Q17RN3	349 aa	Known RBP	13.87	□□□□□ -0.19
ACSS2-223	ENST00000494727	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
ACSS2-223	ENST00000494727	POLR3GL	Q9BT43	218 aa		13.87	□□□□□ -0.19
ACSS2-223	ENST00000494727	MON2	Q7Z3U7	1717 aa		13.87	□□□□□ -0.19
ACSS2-223	ENST00000494727	SLIT3	O75094	1523 aa		13.86	□□□□□ -0.19
ACSS2-223	ENST00000494727	ATMIN	O43313	823 aa	Predicted RBP	13.86	□□□□□ -0.19
ACSS2-223	ENST00000494727	NME9	Q86XW9	330 aa		13.86	□□□□□ -0.19
ACSS2-223	ENST00000494727	USP35	Q9P2H5	1018 aa		13.86	□□□□□ -0.19
ACSS2-223	ENST00000494727	SEPT12	Q8IYM1	358 aa		13.85	□□□□□ -0.19
ACSS2-223	ENST00000494727	TTC21A	Q8NDW8	1320 aa		13.85	□□□□□ -0.19
ACSS2-223	ENST00000494727	EVA1C	P58658	441 aa		13.84	□□□□□ -0.19
ACSS2-223	ENST00000494727	TERF2IP	Q9NYB0	399 aa		13.84	□□□□□ -0.19
ACSS2-223	ENST00000494727	CPD	O75976	1380 aa		13.83	□□□□□ -0.19
ACSS2-223	ENST00000494727	ATN1	P54259	1190 aa	Predicted RBP	13.83	□□□□□ -0.2
ACSS2-223	ENST00000494727	EDC4	Q6P2E9	1401 aa	Known RBP	13.82	□□□□□ -0.2
ACSS2-223	ENST00000494727	CAMTA1	Q9Y6Y1	1673 aa		13.82	□□□□□ -0.2
ACSS2-223	ENST00000494727	LARP1	Q6PKG0	1096 aa	Known RBP	13.82	□□□□□ -0.2
ACSS2-223	ENST00000494727	SPATA31A5	Q5VU36	1347 aa		13.82	□□□□□ -0.2
ACSS2-223	ENST00000494727	SPATA31A7	Q8IWB4	1347 aa		13.82	□□□□□ -0.2
ACSS2-223	ENST00000494727	LMO7	Q8WWI1	1683 aa		13.82	□□□□□ -0.2
ACSS2-223	ENST00000494727	STK25	O00506	426 aa		13.81	□□□□□ -0.2
ACSS2-223	ENST00000494727	HSPA5	P11021	654 aa	Known RBP	13.81	□□□□□ -0.2
ACSS2-223	ENST00000494727	COL5A2	P05997	1499 aa	Predicted RBP	13.8	□□□□□ -0.2
ACSS2-223	ENST00000494727	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.8	□□□□□ -0.2
ACSS2-223	ENST00000494727	SPATA31A1	Q5TZJ5	1347 aa		13.8	□□□□□ -0.2
ACSS2-223	ENST00000494727	ANKRD36B	Q8N2N9	1353 aa		13.8	□□□□□ -0.2
ACSS2-223	ENST00000494727	NINL	Q9Y2I6	1382 aa		13.8	□□□□□ -0.2
ACSS2-223	ENST00000494727	NFAT5	O94916	1531 aa		13.8	□□□□□ -0.2
ACSS2-223	ENST00000494727	BRWD3	Q6RI45	1802 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms