RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 ZNF592Q92610 1267 aa7.06□□□□□ -1.28
CLHC1-213ENST00000494539 FAM181BA6NEQ2 426 aa7.05□□□□□ -1.28
CLHC1-213ENST00000494539 ZBBXA8MT70 800 aa7.05□□□□□ -1.28
CLHC1-213ENST00000494539 SNRPBP14678 240 aaKnown RBP7.05□□□□□ -1.28
CLHC1-213ENST00000494539 NBPF20Q3BBV1 942 aa7.05□□□□□ -1.28
CLHC1-213ENST00000494539 GRM5P41594 1212 aa7.04□□□□□ -1.28
CLHC1-213ENST00000494539 WDR4P57081 412 aaKnown RBP7.04□□□□□ -1.28
CLHC1-213ENST00000494539 TRIM47Q96LD4 638 aa7.04□□□□□ -1.28
CLHC1-213ENST00000494539 SNRKQ9NRH2 765 aa7.04□□□□□ -1.28
CLHC1-213ENST00000494539 NR3C2P08235 984 aa7.03□□□□□ -1.28
CLHC1-213ENST00000494539 TIMP2P16035 220 aa7.03□□□□□ -1.28
CLHC1-213ENST00000494539 DZIP3Q86Y13 1208 aaKnown RBP7.03□□□□□ -1.28
CLHC1-213ENST00000494539 CCDC116Q8IYX3 515 aa7.03□□□□□ -1.28
CLHC1-213ENST00000494539 KIFC2Q96AC6 838 aa7.03□□□□□ -1.28
CLHC1-213ENST00000494539 KCTD15Q96SI1 283 aaPredicted RBP7.03□□□□□ -1.28
CLHC1-213ENST00000494539 OCSTAMPQ9BR26 566 aa7.03□□□□□ -1.28
CLHC1-213ENST00000494539 ZNF330Q9Y3S2 320 aaPredicted RBP7.03□□□□□ -1.28
CLHC1-213ENST00000494539 EMILIN1Q9Y6C2 1016 aa7.03□□□□□ -1.28
CLHC1-213ENST00000494539 ZIC2O95409 532 aaPredicted RBP7.02□□□□□ -1.29
CLHC1-213ENST00000494539 DHX9Q08211 1270 aaKnown RBP7.02□□□□□ -1.29
CLHC1-213ENST00000494539 TMEM132AQ24JP5 1023 aa7.02□□□□□ -1.29
CLHC1-213ENST00000494539 SLC16A10Q8TF71 515 aa7.02□□□□□ -1.29
CLHC1-213ENST00000494539 PGPEP1Q9NXJ5 209 aa7.02□□□□□ -1.29
CLHC1-213ENST00000494539 FBXO45P0C2W1 286 aa7.01□□□□□ -1.29
CLHC1-213ENST00000494539 MCCD1P59942 119 aaPredicted RBP7.01□□□□□ -1.29
CLHC1-213ENST00000494539 NR1H3Q13133 447 aa7.01□□□□□ -1.29
CLHC1-213ENST00000494539 TRIM52Q96A61 297 aa7.01□□□□□ -1.29
CLHC1-213ENST00000494539 KLF16Q9BXK1 252 aaPredicted RBP7.01□□□□□ -1.29
CLHC1-213ENST00000494539 SCARF1Q14162 830 aa7□□□□□ -1.29
CLHC1-213ENST00000494539 ITPKCQ96DU7 683 aa7□□□□□ -1.29
CLHC1-213ENST00000494539 PCDHB9Q9Y5E1 797 aa7□□□□□ -1.29
CLHC1-213ENST00000494539 BMP1P13497 986 aa6.99□□□□□ -1.29
CLHC1-213ENST00000494539 MCM6Q14566 821 aa6.99□□□□□ -1.29
CLHC1-213ENST00000494539 INTS6LQ5JSJ4 861 aaKnown RBP6.99□□□□□ -1.29
CLHC1-213ENST00000494539 SEPT12Q8IYM1 358 aa6.99□□□□□ -1.29
CLHC1-213ENST00000494539 ZFAND3Q9H8U3 227 aa6.99□□□□□ -1.29
CLHC1-213ENST00000494539 GPR37L1O60883 481 aa6.98□□□□□ -1.29
CLHC1-213ENST00000494539 UPP2O95045 317 aa6.98□□□□□ -1.29
CLHC1-213ENST00000494539 PPP1R26Q5T8A7 1209 aaPredicted RBP6.98□□□□□ -1.29
CLHC1-213ENST00000494539 MRPL14Q6P1L8 145 aaKnown RBP6.98□□□□□ -1.29
CLHC1-213ENST00000494539 TRIM46Q7Z4K8 759 aa6.98□□□□□ -1.29
CLHC1-213ENST00000494539 CCDC125Q86Z20 511 aa6.98□□□□□ -1.29
CLHC1-213ENST00000494539 TBC1D2BQ9UPU7 963 aa6.98□□□□□ -1.29
CLHC1-213ENST00000494539 ESPNB1AK53 854 aa6.97□□□□□ -1.29
CLHC1-213ENST00000494539 LCE2CQ5TA81 110 aa6.97□□□□□ -1.29
CLHC1-213ENST00000494539 MEIOBQ8N635 442 aa6.97□□□□□ -1.29
CLHC1-213ENST00000494539 FLIIQ13045 1269 aa6.96□□□□□ -1.3
CLHC1-213ENST00000494539 RAB15P59190 212 aa6.95□□□□□ -1.3
CLHC1-213ENST00000494539 RNF20Q5VTR2 975 aa6.95□□□□□ -1.3
CLHC1-213ENST00000494539 NXF1Q9UBU9 619 aaKnown RBP6.95□□□□□ -1.3
CLHC1-213ENST00000494539 ABL2P42684 1182 aa6.94□□□□□ -1.3
CLHC1-213ENST00000494539 EIF4G2P78344 907 aaKnown RBP eCLIP6.94□□□□□ -1.3
CLHC1-213ENST00000494539 WASHC4Q2M389 1173 aa6.94□□□□□ -1.3
CLHC1-213ENST00000494539 LINC00528Q8N1L1 170 aa6.94□□□□□ -1.3
CLHC1-213ENST00000494539 ZSCAN1Q8NBB4 408 aa6.94□□□□□ -1.3
CLHC1-213ENST00000494539 IRF7Q92985 503 aa6.94□□□□□ -1.3
CLHC1-213ENST00000494539 ZFP42Q96MM3 310 aa6.94□□□□□ -1.3
CLHC1-213ENST00000494539 TSEN34Q9BSV6 310 aaKnown RBP6.94□□□□□ -1.3
CLHC1-213ENST00000494539 GDPD2Q9HCC8 539 aa6.94□□□□□ -1.3
CLHC1-213ENST00000494539 ERVH48-1M5A8F1 160 aa6.93□□□□□ -1.3
CLHC1-213ENST00000494539 Q6ZVU0 165 aa6.93□□□□□ -1.3
CLHC1-213ENST00000494539 WWC1Q8IX03 1113 aa6.93□□□□□ -1.3
CLHC1-213ENST00000494539 PURBQ96QR8 312 aaKnown RBP6.93□□□□□ -1.3
CLHC1-213ENST00000494539 RAD21O60216 631 aa6.92□□□□□ -1.3
CLHC1-213ENST00000494539 BMP2P12643 396 aa6.92□□□□□ -1.3
CLHC1-213ENST00000494539 GMPRP36959 345 aa6.92□□□□□ -1.3
CLHC1-213ENST00000494539 C6orf118Q5T5N4 469 aa6.92□□□□□ -1.3
CLHC1-213ENST00000494539 GIGYF1O75420 1035 aaPredicted RBP6.91□□□□□ -1.3
CLHC1-213ENST00000494539 IRF5Q13568 498 aa6.91□□□□□ -1.3
CLHC1-213ENST00000494539 NPAS3Q8IXF0 933 aa6.91□□□□□ -1.3
CLHC1-213ENST00000494539 ZNF784Q8NCA9 323 aaPredicted RBP6.91□□□□□ -1.3
CLHC1-213ENST00000494539 UBTFP17480 764 aaKnown RBP6.9□□□□□ -1.3
CLHC1-213ENST00000494539 SOX11P35716 441 aa6.9□□□□□ -1.3
CLHC1-213ENST00000494539 CBLBQ13191 982 aa6.9□□□□□ -1.3
CLHC1-213ENST00000494539 TMPRSS4Q9NRS4 437 aa6.9□□□□□ -1.3
CLHC1-213ENST00000494539 COG6Q9Y2V7 657 aa6.9□□□□□ -1.3
CLHC1-213ENST00000494539 MAN1A2O60476 641 aa6.89□□□□□ -1.31
CLHC1-213ENST00000494539 ADH1AP07327 375 aa6.89□□□□□ -1.31
CLHC1-213ENST00000494539 SPINT1O43278 529 aa6.88□□□□□ -1.31
CLHC1-213ENST00000494539 LILRA1O75019 489 aa6.88□□□□□ -1.31
CLHC1-213ENST00000494539 ESF1Q9H501 851 aaKnown RBP6.88□□□□□ -1.31
CLHC1-213ENST00000494539 CYLDQ9NQC7 956 aa6.88□□□□□ -1.31
CLHC1-213ENST00000494539 CEP126Q9P2H0 1117 aa6.88□□□□□ -1.31
CLHC1-213ENST00000494539 PCDHB11Q9Y5F2 797 aa6.88□□□□□ -1.31
CLHC1-213ENST00000494539 SOS2Q07890 1332 aaPredicted RBP6.87□□□□□ -1.31
CLHC1-213ENST00000494539 TTLL8A6PVC2 850 aa6.87□□□□□ -1.31
CLHC1-213ENST00000494539 VEGFBP49765 207 aa6.87□□□□□ -1.31
CLHC1-213ENST00000494539 ERVK-9P63128 1117 aa6.87□□□□□ -1.31
CLHC1-213ENST00000494539 RELBQ01201 579 aa6.87□□□□□ -1.31
CLHC1-213ENST00000494539 VAC14Q08AM6 782 aa6.87□□□□□ -1.31
CLHC1-213ENST00000494539 CC2D2BQ6DHV5 1058 aa6.87□□□□□ -1.31
CLHC1-213ENST00000494539 SEMA3FQ13275 785 aa6.86□□□□□ -1.31
CLHC1-213ENST00000494539 SLFNL1Q499Z3 407 aa6.86□□□□□ -1.31
CLHC1-213ENST00000494539 AGBL1Q96MI9 1066 aa6.86□□□□□ -1.31
CLHC1-213ENST00000494539 H3BM21 787 aa6.85□□□□□ -1.31
CLHC1-213ENST00000494539 MYCP01106 439 aaPredicted RBP6.85□□□□□ -1.31
CLHC1-213ENST00000494539 PTGIRP43119 386 aa6.85□□□□□ -1.31
CLHC1-213ENST00000494539 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.85□□□□□ -1.31
CLHC1-213ENST00000494539 CYP2U1Q7Z449 544 aa6.85□□□□□ -1.31
CLHC1-213ENST00000494539 RNF135Q8IUD6 432 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms