RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 ADAMTS2O95450 1211 aa6.45□□□□□ -1.38
PTPN12-212ENST00000494248 CELA2BP08218 269 aaPredicted RBP6.45□□□□□ -1.38
PTPN12-212ENST00000494248 FOXD4L6Q3SYB3 417 aaPredicted RBP6.45□□□□□ -1.38
PTPN12-212ENST00000494248 FOXD4L3Q6VB84 417 aaPredicted RBP6.45□□□□□ -1.38
PTPN12-212ENST00000494248 SPIRE2Q8WWL2 714 aa6.45□□□□□ -1.38
PTPN12-212ENST00000494248 ENAMQ9NRM1 1142 aa6.45□□□□□ -1.38
PTPN12-212ENST00000494248 SLC35F4A4IF30 521 aa6.44□□□□□ -1.38
PTPN12-212ENST00000494248 MOXD2PA6NHM9 499 aa6.44□□□□□ -1.38
PTPN12-212ENST00000494248 UPP2O95045 317 aa6.44□□□□□ -1.38
PTPN12-212ENST00000494248 ARTNQ5T4W7 220 aa6.44□□□□□ -1.38
PTPN12-212ENST00000494248 DESI1Q6ICB0 168 aa6.44□□□□□ -1.38
PTPN12-212ENST00000494248 GPCPD1Q9NPB8 672 aa6.44□□□□□ -1.38
PTPN12-212ENST00000494248 MAP10Q9P2G4 905 aa6.44□□□□□ -1.38
PTPN12-212ENST00000494248 SPTLC1O15269 473 aa6.43□□□□□ -1.38
PTPN12-212ENST00000494248 CTHP32929 405 aa6.43□□□□□ -1.38
PTPN12-212ENST00000494248 LYPD8Q6UX82 237 aa6.43□□□□□ -1.38
PTPN12-212ENST00000494248 NBPF11Q86T75 865 aa6.43□□□□□ -1.38
PTPN12-212ENST00000494248 SEMA6BQ9H3T3 888 aa6.43□□□□□ -1.38
PTPN12-212ENST00000494248 F12P00748 615 aaPredicted RBP6.42□□□□□ -1.38
PTPN12-212ENST00000494248 ITGA6P23229 1130 aa6.42□□□□□ -1.38
PTPN12-212ENST00000494248 CCDC102AQ96A19 550 aa6.42□□□□□ -1.38
PTPN12-212ENST00000494248 TSEN34Q9BSV6 310 aaKnown RBP6.42□□□□□ -1.38
PTPN12-212ENST00000494248 FZD5Q13467 585 aa6.41□□□□□ -1.38
PTPN12-212ENST00000494248 CDC14CA4D256 554 aa6.4□□□□□ -1.38
PTPN12-212ENST00000494248 CFAP99D6REC4 459 aa6.4□□□□□ -1.38
PTPN12-212ENST00000494248 FSHRP23945 695 aa6.4□□□□□ -1.38
PTPN12-212ENST00000494248 CLCN1P35523 988 aa6.4□□□□□ -1.38
PTPN12-212ENST00000494248 CBLBQ13191 982 aa6.4□□□□□ -1.38
PTPN12-212ENST00000494248 MTMR2Q13614 643 aa6.4□□□□□ -1.38
PTPN12-212ENST00000494248 MINK1Q8N4C8 1332 aaPredicted RBP6.4□□□□□ -1.39
PTPN12-212ENST00000494248 SENP3-EIF4A1A0A087X0R7 540 aa6.39□□□□□ -1.39
PTPN12-212ENST00000494248 SPINT1O43278 529 aa6.39□□□□□ -1.39
PTPN12-212ENST00000494248 GAS6Q14393 721 aa6.39□□□□□ -1.39
PTPN12-212ENST00000494248 C1QTNF2Q9BXJ5 285 aa6.39□□□□□ -1.39
PTPN12-212ENST00000494248 SV2AQ7L0J3 742 aa6.38□□□□□ -1.39
PTPN12-212ENST00000494248 SH3RF1Q7Z6J0 888 aa6.38□□□□□ -1.39
PTPN12-212ENST00000494248 PER1O15534 1290 aaPredicted RBP6.37□□□□□ -1.39
PTPN12-212ENST00000494248 SRSF11Q05519 484 aaKnown RBP6.37□□□□□ -1.39
PTPN12-212ENST00000494248 AGERQ15109 404 aa6.37□□□□□ -1.39
PTPN12-212ENST00000494248 RTN4Q9NQC3 1192 aaKnown RBP6.37□□□□□ -1.39
PTPN12-212ENST00000494248 CUEDC1Q9NWM3 386 aaPredicted RBP6.37□□□□□ -1.39
PTPN12-212ENST00000494248 PCDHB15Q9Y5E8 787 aa6.37□□□□□ -1.39
PTPN12-212ENST00000494248 SPDYE5A6NIY4 337 aa6.36□□□□□ -1.39
PTPN12-212ENST00000494248 SSTR3P32745 418 aaPredicted RBP6.36□□□□□ -1.39
PTPN12-212ENST00000494248 CTSOP43234 321 aaPredicted RBP6.36□□□□□ -1.39
PTPN12-212ENST00000494248 Q6ZVU0 165 aa6.36□□□□□ -1.39
PTPN12-212ENST00000494248 BPHLQ86WA6 291 aaPredicted RBP6.36□□□□□ -1.39
PTPN12-212ENST00000494248 CCDC116Q8IYX3 515 aa6.35□□□□□ -1.39
PTPN12-212ENST00000494248 MAP4K5Q9Y4K4 846 aa6.35□□□□□ -1.39
PTPN12-212ENST00000494248 EMILIN1Q9Y6C2 1016 aa6.35□□□□□ -1.39
PTPN12-212ENST00000494248 TXKP42681 527 aa6.34□□□□□ -1.39
PTPN12-212ENST00000494248 AMER1Q5JTC6 1135 aaPredicted RBP6.34□□□□□ -1.39
PTPN12-212ENST00000494248 PPP1R26Q5T8A7 1209 aaPredicted RBP6.34□□□□□ -1.39
PTPN12-212ENST00000494248 VASH1Q7L8A9 365 aaPredicted RBP6.34□□□□□ -1.39
PTPN12-212ENST00000494248 ALYREFQ86V81 257 aaKnown RBP6.34□□□□□ -1.39
PTPN12-212ENST00000494248 AGBL1Q96MI9 1066 aa6.34□□□□□ -1.39
PTPN12-212ENST00000494248 TRMT44Q8IYL2 757 aaKnown RBP6.33□□□□□ -1.4
PTPN12-212ENST00000494248 HRCP23327 699 aa6.32□□□□□ -1.4
PTPN12-212ENST00000494248 SH3BP5LQ7L8J4 393 aa6.32□□□□□ -1.4
PTPN12-212ENST00000494248 INSM2Q96T92 566 aaPredicted RBP6.32□□□□□ -1.4
PTPN12-212ENST00000494248 MCTP1Q6DN14 999 aa6.31□□□□□ -1.4
PTPN12-212ENST00000494248 NEDD1Q8NHV4 660 aa6.31□□□□□ -1.4
PTPN12-212ENST00000494248 RNF217Q8TC41 542 aa6.31□□□□□ -1.4
PTPN12-212ENST00000494248 RSBN1LQ6PCB5 846 aaPredicted RBP6.3□□□□□ -1.4
PTPN12-212ENST00000494248 CABLES1Q8TDN4 633 aa6.3□□□□□ -1.4
PTPN12-212ENST00000494248 MAGEB6P1A0A0J9YX57 407 aa6.29□□□□□ -1.4
PTPN12-212ENST00000494248 COL8A1P27658 744 aa6.29□□□□□ -1.4
PTPN12-212ENST00000494248 RELBQ01201 579 aa6.29□□□□□ -1.4
PTPN12-212ENST00000494248 KRI1Q8N9T8 703 aaKnown RBP6.29□□□□□ -1.4
PTPN12-212ENST00000494248 TBC1D2Q9BYX2 928 aa6.28□□□□□ -1.4
PTPN12-212ENST00000494248 GJA5P36382 358 aa6.27□□□□□ -1.41
PTPN12-212ENST00000494248 ERFEQ4G0M1 354 aa6.27□□□□□ -1.41
PTPN12-212ENST00000494248 FOXD4L5Q5VV16 416 aaPredicted RBP6.27□□□□□ -1.41
PTPN12-212ENST00000494248 ACDQ96AP0 544 aa6.27□□□□□ -1.41
PTPN12-212ENST00000494248 FMNL2Q96PY5 1086 aa6.27□□□□□ -1.41
PTPN12-212ENST00000494248 CARD14Q9BXL6 1004 aa6.27□□□□□ -1.41
PTPN12-212ENST00000494248 ZNF395Q9H8N7 513 aaPredicted RBP6.27□□□□□ -1.41
PTPN12-212ENST00000494248 C1QTNF9BB2RNN3 333 aa6.26□□□□□ -1.41
PTPN12-212ENST00000494248 GPR25O00155 361 aa6.26□□□□□ -1.41
PTPN12-212ENST00000494248 PAX4O43316 350 aa6.26□□□□□ -1.41
PTPN12-212ENST00000494248 KDF1Q8NAX2 398 aaPredicted RBP6.26□□□□□ -1.41
PTPN12-212ENST00000494248 BEGAINQ9BUH8 593 aa6.26□□□□□ -1.41
PTPN12-212ENST00000494248 POLMQ9NP87 494 aaPredicted RBP6.26□□□□□ -1.41
PTPN12-212ENST00000494248 PGPEP1Q9NXJ5 209 aa6.26□□□□□ -1.41
PTPN12-212ENST00000494248 IGF1RP08069 1367 aa6.26□□□□□ -1.41
PTPN12-212ENST00000494248 BCRP11274 1271 aa6.25□□□□□ -1.41
PTPN12-212ENST00000494248 SNRPNP63162 240 aaKnown RBP6.25□□□□□ -1.41
PTPN12-212ENST00000494248 DOC2BQ14184 412 aa6.25□□□□□ -1.41
PTPN12-212ENST00000494248 ZNF837Q96EG3 531 aaPredicted RBP6.25□□□□□ -1.41
PTPN12-212ENST00000494248 ZBTB3Q9H5J0 574 aa6.25□□□□□ -1.41
PTPN12-212ENST00000494248 MBIPQ9NS73 344 aa6.25□□□□□ -1.41
PTPN12-212ENST00000494248 DBN1Q16643 649 aa6.23□□□□□ -1.41
PTPN12-212ENST00000494248 GIGYF2Q6Y7W6 1299 aaKnown RBP6.23□□□□□ -1.41
PTPN12-212ENST00000494248 CD163Q86VB7 1156 aa6.23□□□□□ -1.41
PTPN12-212ENST00000494248 KCTD15Q96SI1 283 aaPredicted RBP6.23□□□□□ -1.41
PTPN12-212ENST00000494248 ADD1P35611 737 aaKnown RBP6.22□□□□□ -1.41
PTPN12-212ENST00000494248 QPCTQ16769 361 aa6.22□□□□□ -1.41
PTPN12-212ENST00000494248 CSPP1Q1MSJ5 1256 aa6.22□□□□□ -1.41
PTPN12-212ENST00000494248 INTS6LQ5JSJ4 861 aaKnown RBP6.22□□□□□ -1.41
PTPN12-212ENST00000494248 NBPF14Q5TI25 921 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms