RNA–Protein interactions for RNA: ENST00000494227.3

RN7SL538P-201, Transcript of RNA, 7SL, cytoplasmic 538, pseudogene, humanhuman

BASIC

Gene RN7SL538P, Length 304 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL538P-201ENST00000494227 ANKRD36BQ8N2N9 1353 aa12.21□□□□□ -0.45
RN7SL538P-201ENST00000494227 A0A0G2JS52 829 aa12.21□□□□□ -0.45
RN7SL538P-201ENST00000494227 MYT1Q01538 1121 aa12.21□□□□□ -0.45
RN7SL538P-201ENST00000494227 SF3B2Q13435 895 aaKnown RBP12.21□□□□□ -0.45
RN7SL538P-201ENST00000494227 TERF2IPQ9NYB0 399 aa12.21□□□□□ -0.45
RN7SL538P-201ENST00000494227 NPC1L1Q9UHC9 1359 aa12.2□□□□□ -0.46
RN7SL538P-201ENST00000494227 FAM83GA6ND36 823 aa12.2□□□□□ -0.46
RN7SL538P-201ENST00000494227 ONECUT3O60422 494 aaPredicted RBP12.2□□□□□ -0.46
RN7SL538P-201ENST00000494227 HAP1P54257 671 aaPredicted RBP12.2□□□□□ -0.46
RN7SL538P-201ENST00000494227 EN1Q05925 392 aaPredicted RBP12.2□□□□□ -0.46
RN7SL538P-201ENST00000494227 MRS2Q9HD23 443 aa12.2□□□□□ -0.46
RN7SL538P-201ENST00000494227 PHF8Q9UPP1 1060 aa12.2□□□□□ -0.46
RN7SL538P-201ENST00000494227 CAMTA1Q9Y6Y1 1673 aa12.19□□□□□ -0.46
RN7SL538P-201ENST00000494227 ARHGEF10O15013 1369 aa12.19□□□□□ -0.46
RN7SL538P-201ENST00000494227 NINLQ9Y2I6 1382 aa12.19□□□□□ -0.46
RN7SL538P-201ENST00000494227 MYBBP1AQ9BQG0 1328 aaKnown RBP12.19□□□□□ -0.46
RN7SL538P-201ENST00000494227 PLEKHG3A1L390 1219 aa12.19□□□□□ -0.46
RN7SL538P-201ENST00000494227 PPP2R1AP30153 589 aa12.19□□□□□ -0.46
RN7SL538P-201ENST00000494227 R3HDM1Q15032 1099 aaKnown RBP12.19□□□□□ -0.46
RN7SL538P-201ENST00000494227 LMOD2Q6P5Q4 547 aa12.19□□□□□ -0.46
RN7SL538P-201ENST00000494227 HDGFL2Q7Z4V5 671 aaPredicted RBP12.19□□□□□ -0.46
RN7SL538P-201ENST00000494227 PPIP5K1Q6PFW1 1433 aa12.19□□□□□ -0.46
RN7SL538P-201ENST00000494227 PMFBP1Q8TBY8 1022 aa12.18□□□□□ -0.46
RN7SL538P-201ENST00000494227 ATP7BP35670 1465 aa12.18□□□□□ -0.46
RN7SL538P-201ENST00000494227 CPSF1Q10570 1443 aaKnown RBP12.18□□□□□ -0.46
RN7SL538P-201ENST00000494227 NRKQ7Z2Y5 1582 aa12.18□□□□□ -0.46
RN7SL538P-201ENST00000494227 CEP350Q5VT06 3117 aa12.17□□□□□ -0.46
RN7SL538P-201ENST00000494227 FYB1O15117 783 aa12.17□□□□□ -0.46
RN7SL538P-201ENST00000494227 BAG6P46379 1132 aa12.17□□□□□ -0.46
RN7SL538P-201ENST00000494227 BTG4Q9NY30 223 aa12.17□□□□□ -0.46
RN7SL538P-201ENST00000494227 ANKARQ7Z5J8 1434 aa12.17□□□□□ -0.46
RN7SL538P-201ENST00000494227 TOPAZ1Q8N9V7 1692 aa12.16□□□□□ -0.46
RN7SL538P-201ENST00000494227 ACEP12821 1306 aa12.16□□□□□ -0.46
RN7SL538P-201ENST00000494227 MORC1Q86VD1 984 aa12.16□□□□□ -0.46
RN7SL538P-201ENST00000494227 NLRP13Q86W25 1043 aa12.16□□□□□ -0.46
RN7SL538P-201ENST00000494227 PNISRQ8TF01 805 aaKnown RBP12.16□□□□□ -0.46
RN7SL538P-201ENST00000494227 GGNBP2Q9H3C7 697 aa12.16□□□□□ -0.46
RN7SL538P-201ENST00000494227 CGNL1Q0VF96 1302 aa12.15□□□□□ -0.46
RN7SL538P-201ENST00000494227 ITSN1Q15811 1721 aa12.15□□□□□ -0.46
RN7SL538P-201ENST00000494227 EZH2Q15910 746 aaKnown RBP12.15□□□□□ -0.46
RN7SL538P-201ENST00000494227 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.15□□□□□ -0.46
RN7SL538P-201ENST00000494227 FAM9BQ8IZU0 186 aa12.15□□□□□ -0.46
RN7SL538P-201ENST00000494227 SPATA31A5Q5VU36 1347 aa12.14□□□□□ -0.47
RN7SL538P-201ENST00000494227 SPATA31A7Q8IWB4 1347 aa12.14□□□□□ -0.47
RN7SL538P-201ENST00000494227 LMO7Q8WWI1 1683 aa12.14□□□□□ -0.47
RN7SL538P-201ENST00000494227 TNNT2P45379 298 aaPredicted RBP12.14□□□□□ -0.47
RN7SL538P-201ENST00000494227 BRD4O60885 1362 aaPredicted RBP12.14□□□□□ -0.47
RN7SL538P-201ENST00000494227 NME9Q86XW9 330 aa12.13□□□□□ -0.47
RN7SL538P-201ENST00000494227 ZNF692Q9BU19 519 aaPredicted RBP12.13□□□□□ -0.47
RN7SL538P-201ENST00000494227 ZBTB12Q9Y330 459 aaPredicted RBP12.12□□□□□ -0.47
RN7SL538P-201ENST00000494227 KIAA0232Q92628 1395 aa12.12□□□□□ -0.47
RN7SL538P-201ENST00000494227 CASZ1Q86V15 1759 aa12.12□□□□□ -0.47
RN7SL538P-201ENST00000494227 TTC21BQ7Z4L5 1316 aa12.11□□□□□ -0.47
RN7SL538P-201ENST00000494227 LRRC37A3O60309 1634 aa12.11□□□□□ -0.47
RN7SL538P-201ENST00000494227 PEAK1Q9H792 1746 aa12.11□□□□□ -0.47
RN7SL538P-201ENST00000494227 FBLN1P23142 703 aa12.11□□□□□ -0.47
RN7SL538P-201ENST00000494227 PSME1Q06323 249 aa12.11□□□□□ -0.47
RN7SL538P-201ENST00000494227 NGDNQ8NEJ9 315 aaKnown RBP12.11□□□□□ -0.47
RN7SL538P-201ENST00000494227 WNK3Q9BYP7 1800 aa12.11□□□□□ -0.47
RN7SL538P-201ENST00000494227 PARP4Q9UKK3 1724 aaKnown RBP12.11□□□□□ -0.47
RN7SL538P-201ENST00000494227 POLR3AO14802 1390 aaPredicted RBP12.1□□□□□ -0.47
RN7SL538P-201ENST00000494227 NSD2O96028 1365 aa12.1□□□□□ -0.47
RN7SL538P-201ENST00000494227 TRIM37O94972 964 aa12.1□□□□□ -0.47
RN7SL538P-201ENST00000494227 CAMKK2Q96RR4 588 aa12.1□□□□□ -0.47
RN7SL538P-201ENST00000494227 EDC4Q6P2E9 1401 aaKnown RBP12.1□□□□□ -0.47
RN7SL538P-201ENST00000494227 SSH2Q76I76 1423 aa12.1□□□□□ -0.47
RN7SL538P-201ENST00000494227 CHRNA2Q15822 529 aa12.09□□□□□ -0.47
RN7SL538P-201ENST00000494227 SBF2Q86WG5 1849 aa12.09□□□□□ -0.47
RN7SL538P-201ENST00000494227 SPATA31A1Q5TZJ5 1347 aa12.09□□□□□ -0.47
RN7SL538P-201ENST00000494227 RGPD3A6NKT7 1758 aaPredicted RBP12.08□□□□□ -0.48
RN7SL538P-201ENST00000494227 RGPD4Q7Z3J3 1758 aa12.08□□□□□ -0.48
RN7SL538P-201ENST00000494227 MTHFSP49914 203 aa12.08□□□□□ -0.48
RN7SL538P-201ENST00000494227 PRDM11Q9NQV5 511 aa12.08□□□□□ -0.48
RN7SL538P-201ENST00000494227 USP6P35125 1406 aa12.08□□□□□ -0.48
RN7SL538P-201ENST00000494227 SENP3-EIF4A1A0A087X0R7 540 aa12.06□□□□□ -0.48
RN7SL538P-201ENST00000494227 STRN4Q9NRL3 753 aa12.06□□□□□ -0.48
RN7SL538P-201ENST00000494227 YY1P25490 414 aa12.05□□□□□ -0.48
RN7SL538P-201ENST00000494227 HNRNPUQ00839 825 aaKnown RBP eCLIP12.05□□□□□ -0.48
RN7SL538P-201ENST00000494227 NUTM2GQ5VZR2 741 aa12.05□□□□□ -0.48
RN7SL538P-201ENST00000494227 USP35Q9P2H5 1018 aa12.05□□□□□ -0.48
RN7SL538P-201ENST00000494227 ADAMTS8Q9UP79 889 aa12.05□□□□□ -0.48
RN7SL538P-201ENST00000494227 COG3Q96JB2 828 aa12.04□□□□□ -0.48
RN7SL538P-201ENST00000494227 POLKQ9UBT6 870 aa12.04□□□□□ -0.48
RN7SL538P-201ENST00000494227 PAK3O75914 559 aaPredicted RBP12.03□□□□□ -0.48
RN7SL538P-201ENST00000494227 APBA3O96018 575 aa12.03□□□□□ -0.48
RN7SL538P-201ENST00000494227 ANO8Q9HCE9 1232 aaPredicted RBP12.03□□□□□ -0.48
RN7SL538P-201ENST00000494227 TTC21AQ8NDW8 1320 aa12.03□□□□□ -0.48
RN7SL538P-201ENST00000494227 COL5A2P05997 1499 aaPredicted RBP12.02□□□□□ -0.48
RN7SL538P-201ENST00000494227 ZC3H6P61129 1189 aaKnown RBP12.02□□□□□ -0.49
RN7SL538P-201ENST00000494227 LARP1Q6PKG0 1096 aaKnown RBP12.02□□□□□ -0.49
RN7SL538P-201ENST00000494227 EMILIN1Q9Y6C2 1016 aa12.02□□□□□ -0.49
RN7SL538P-201ENST00000494227 USP31Q70CQ4 1352 aa12.02□□□□□ -0.49
RN7SL538P-201ENST00000494227 AKAP12Q02952 1782 aa12.02□□□□□ -0.49
RN7SL538P-201ENST00000494227 CENPBP07199 599 aaPredicted RBP12.01□□□□□ -0.49
RN7SL538P-201ENST00000494227 NLRP6P59044 892 aa12.01□□□□□ -0.49
RN7SL538P-201ENST00000494227 RRS1Q15050 365 aaKnown RBP12.01□□□□□ -0.49
RN7SL538P-201ENST00000494227 PDGFDQ9GZP0 370 aaPredicted RBP12.01□□□□□ -0.49
RN7SL538P-201ENST00000494227 PIK3C2AO00443 1686 aa12□□□□□ -0.49
RN7SL538P-201ENST00000494227 FAM196AQ6ZSG2 479 aa12□□□□□ -0.49
RN7SL538P-201ENST00000494227 PTF1AQ7RTS3 328 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms