RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 FBXO45P0C2W1 286 aa7.16□□□□□ -1.26
GTF3A-208ENST00000493903 SLC19A1P41440 591 aa7.16□□□□□ -1.26
GTF3A-208ENST00000493903 USP17L2Q6R6M4 530 aa7.16□□□□□ -1.26
GTF3A-208ENST00000493903 USP17L1Q7RTZ2 530 aa7.16□□□□□ -1.26
GTF3A-208ENST00000493903 NUDT12Q9BQG2 462 aa7.16□□□□□ -1.26
GTF3A-208ENST00000493903 LZTS3O60299 673 aaPredicted RBP7.15□□□□□ -1.26
GTF3A-208ENST00000493903 CCNYL3P0C7X3 344 aa7.15□□□□□ -1.26
GTF3A-208ENST00000493903 PTPRNQ16849 979 aa7.15□□□□□ -1.26
GTF3A-208ENST00000493903 PHLDB3Q6NSJ2 640 aa7.15□□□□□ -1.26
GTF3A-208ENST00000493903 STK32AQ8WU08 396 aa7.15□□□□□ -1.26
GTF3A-208ENST00000493903 V9GY48 417 aaPredicted RBP7.15□□□□□ -1.26
GTF3A-208ENST00000493903 USP17L5A8MUK1 530 aa7.14□□□□□ -1.27
GTF3A-208ENST00000493903 SSFA2P28290 1259 aa7.14□□□□□ -1.27
GTF3A-208ENST00000493903 MCCD1P59942 119 aaPredicted RBP7.14□□□□□ -1.27
GTF3A-208ENST00000493903 FKBPLQ9UIM3 349 aa7.14□□□□□ -1.27
GTF3A-208ENST00000493903 PIK3CDO00329 1044 aa7.13□□□□□ -1.27
GTF3A-208ENST00000493903 SKIP12755 728 aa7.13□□□□□ -1.27
GTF3A-208ENST00000493903 SPRYD7Q5W111 196 aa7.13□□□□□ -1.27
GTF3A-208ENST00000493903 PTCRAQ6ISU1 281 aaPredicted RBP7.13□□□□□ -1.27
GTF3A-208ENST00000493903 CLP1Q92989 425 aaKnown RBP7.13□□□□□ -1.27
GTF3A-208ENST00000493903 IGSF5Q9NSI5 407 aa7.13□□□□□ -1.27
GTF3A-208ENST00000493903 UNCXA6NJT0 531 aa7.12□□□□□ -1.27
GTF3A-208ENST00000493903 USP17L15C9J2P7 530 aa7.12□□□□□ -1.27
GTF3A-208ENST00000493903 USP17L10C9JJH3 530 aa7.12□□□□□ -1.27
GTF3A-208ENST00000493903 USP17L13C9JLJ4 530 aa7.12□□□□□ -1.27
GTF3A-208ENST00000493903 USP17L12C9JPN9 530 aa7.12□□□□□ -1.27
GTF3A-208ENST00000493903 USP17L11C9JVI0 530 aa7.12□□□□□ -1.27
GTF3A-208ENST00000493903 USP17L21D6R901 530 aa7.12□□□□□ -1.27
GTF3A-208ENST00000493903 USP17L18D6R9N7 530 aa7.12□□□□□ -1.27
GTF3A-208ENST00000493903 USP17L22D6RA61 530 aa7.12□□□□□ -1.27
GTF3A-208ENST00000493903 USP17L17D6RBQ6 530 aa7.12□□□□□ -1.27
GTF3A-208ENST00000493903 USP17L19D6RCP7 530 aa7.12□□□□□ -1.27
GTF3A-208ENST00000493903 USP17L20D6RJB6 530 aa7.12□□□□□ -1.27
GTF3A-208ENST00000493903 ATP5J2-PTCD1G3V325 749 aa7.12□□□□□ -1.27
GTF3A-208ENST00000493903 ZBTB24O43167 697 aaPredicted RBP7.12□□□□□ -1.27
GTF3A-208ENST00000493903 RPIAP49247 311 aa7.12□□□□□ -1.27
GTF3A-208ENST00000493903 USP17L24Q0WX57 530 aa7.12□□□□□ -1.27
GTF3A-208ENST00000493903 LARP1Q6PKG0 1096 aaKnown RBP7.12□□□□□ -1.27
GTF3A-208ENST00000493903 DNAJC14Q6Y2X3 702 aaPredicted RBP7.12□□□□□ -1.27
GTF3A-208ENST00000493903 CDCA7Q9BWT1 371 aaPredicted RBP7.12□□□□□ -1.27
GTF3A-208ENST00000493903 GPSM3Q9Y4H4 160 aa7.12□□□□□ -1.27
GTF3A-208ENST00000493903 PTK7Q13308 1070 aa7.11□□□□□ -1.27
GTF3A-208ENST00000493903 FAM200AQ8TCP9 573 aa7.11□□□□□ -1.27
GTF3A-208ENST00000493903 SIRT1Q96EB6 747 aa7.11□□□□□ -1.27
GTF3A-208ENST00000493903 EVA1BQ9NVM1 165 aa7.11□□□□□ -1.27
GTF3A-208ENST00000493903 MAP10Q9P2G4 905 aa7.11□□□□□ -1.27
GTF3A-208ENST00000493903 MKRN1Q9UHC7 482 aaKnown RBP7.11□□□□□ -1.27
GTF3A-208ENST00000493903 SOWAHDA6NJG2 315 aa7.1□□□□□ -1.27
GTF3A-208ENST00000493903 F12P00748 615 aaPredicted RBP7.1□□□□□ -1.27
GTF3A-208ENST00000493903 CTHP32929 405 aa7.1□□□□□ -1.27
GTF3A-208ENST00000493903 KCNH2Q12809 1159 aa7.1□□□□□ -1.27
GTF3A-208ENST00000493903 TRIM32Q13049 653 aa7.1□□□□□ -1.27
GTF3A-208ENST00000493903 ZNF697Q5TEC3 545 aa7.1□□□□□ -1.27
GTF3A-208ENST00000493903 CD2BP2O95400 341 aaKnown RBP7.09□□□□□ -1.27
GTF3A-208ENST00000493903 RASA1P20936 1047 aa7.09□□□□□ -1.27
GTF3A-208ENST00000493903 FAM69CQ0P6D2 419 aa7.09□□□□□ -1.27
GTF3A-208ENST00000493903 SWI5Q1ZZU3 235 aa7.09□□□□□ -1.27
GTF3A-208ENST00000493903 CRTC2Q53ET0 693 aaPredicted RBP7.09□□□□□ -1.27
GTF3A-208ENST00000493903 ZNF598Q86UK7 904 aaKnown RBP7.09□□□□□ -1.27
GTF3A-208ENST00000493903 C1orf216Q8TAB5 229 aa7.09□□□□□ -1.27
GTF3A-208ENST00000493903 FAM174AQ8TBP5 190 aa7.09□□□□□ -1.27
GTF3A-208ENST00000493903 GPKOWQ92917 476 aaPredicted RBP eCLIP7.09□□□□□ -1.27
GTF3A-208ENST00000493903 UNC93B1Q9H1C4 597 aa7.09□□□□□ -1.27
GTF3A-208ENST00000493903 MAP7D1Q3KQU3 841 aa7.08□□□□□ -1.28
GTF3A-208ENST00000493903 SLFNL1Q499Z3 407 aa7.08□□□□□ -1.28
GTF3A-208ENST00000493903 ANKMY2Q8IV38 441 aa7.08□□□□□ -1.28
GTF3A-208ENST00000493903 CEP126Q9P2H0 1117 aa7.08□□□□□ -1.28
GTF3A-208ENST00000493903 ATP2B4P23634 1241 aa7.07□□□□□ -1.28
GTF3A-208ENST00000493903 TRIM67Q6ZTA4 783 aa7.07□□□□□ -1.28
GTF3A-208ENST00000493903 DEPDC4Q8N2C3 294 aa7.07□□□□□ -1.28
GTF3A-208ENST00000493903 PHTF2Q8N3S3 785 aa7.07□□□□□ -1.28
GTF3A-208ENST00000493903 ARMC2Q8NEN0 867 aa7.07□□□□□ -1.28
GTF3A-208ENST00000493903 SLAIN2Q9P270 581 aa7.07□□□□□ -1.28
GTF3A-208ENST00000493903 CHIC2Q9UKJ5 165 aa7.07□□□□□ -1.28
GTF3A-208ENST00000493903 MARSP56192 900 aaKnown RBP7.06□□□□□ -1.28
GTF3A-208ENST00000493903 SKOR1P84550 965 aa7.06□□□□□ -1.28
GTF3A-208ENST00000493903 PTK2Q05397 1052 aa7.06□□□□□ -1.28
GTF3A-208ENST00000493903 FOXC1Q12948 553 aa7.06□□□□□ -1.28
GTF3A-208ENST00000493903 NCOA4Q13772 614 aa7.06□□□□□ -1.28
GTF3A-208ENST00000493903 PDXDC2PQ6P474 469 aa7.06□□□□□ -1.28
GTF3A-208ENST00000493903 TRIM50Q86XT4 487 aa7.06□□□□□ -1.28
GTF3A-208ENST00000493903 RNF135Q8IUD6 432 aa7.06□□□□□ -1.28
GTF3A-208ENST00000493903 BAP1Q92560 729 aa7.06□□□□□ -1.28
GTF3A-208ENST00000493903 MRRFQ96E11 262 aaKnown RBP7.06□□□□□ -1.28
GTF3A-208ENST00000493903 KIAA1522Q9P206 1035 aaPredicted RBP7.06□□□□□ -1.28
GTF3A-208ENST00000493903 TNFRSF10AO00220 468 aa7.05□□□□□ -1.28
GTF3A-208ENST00000493903 ZNF16P17020 682 aaPredicted RBP7.05□□□□□ -1.28
GTF3A-208ENST00000493903 EML3Q32P44 896 aa7.05□□□□□ -1.28
GTF3A-208ENST00000493903 LINC01559Q495D7 138 aa7.05□□□□□ -1.28
GTF3A-208ENST00000493903 PLPP7Q8NBV4 271 aa7.05□□□□□ -1.28
GTF3A-208ENST00000493903 BCL2L13Q9BXK5 485 aa7.05□□□□□ -1.28
GTF3A-208ENST00000493903 IRX2Q9BZI1 471 aaPredicted RBP7.05□□□□□ -1.28
GTF3A-208ENST00000493903 PKD2L1Q9P0L9 805 aa7.05□□□□□ -1.28
GTF3A-208ENST00000493903 USP35Q9P2H5 1018 aa7.05□□□□□ -1.28
GTF3A-208ENST00000493903 PDZRN3Q9UPQ7 1066 aa7.05□□□□□ -1.28
GTF3A-208ENST00000493903 GDF9O60383 454 aa7.04□□□□□ -1.28
GTF3A-208ENST00000493903 ATP1A2P50993 1020 aa7.04□□□□□ -1.28
GTF3A-208ENST00000493903 SH3BP2P78314 561 aa7.04□□□□□ -1.28
GTF3A-208ENST00000493903 EGFL7Q9UHF1 273 aa7.04□□□□□ -1.28
GTF3A-208ENST00000493903 GFRA3O60609 400 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms