RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 PPP6R1Q9UPN7 881 aa23.81■■□□□ 1.4
RNF40-203ENST00000493683 SLC4A2P04920 1241 aa23.81■■□□□ 1.4
RNF40-203ENST00000493683 HDGFL1Q5TGJ6 251 aa23.81■■□□□ 1.4
RNF40-203ENST00000493683 TSPYL1Q9H0U9 437 aa23.81■■□□□ 1.4
RNF40-203ENST00000493683 NOL7Q9UMY1 257 aaKnown RBP23.81■■□□□ 1.4
RNF40-203ENST00000493683 KRT18P05783 430 aaKnown RBP23.8■■□□□ 1.4
RNF40-203ENST00000493683 TMEM132EQ6IEE7 984 aa23.8■■□□□ 1.4
RNF40-203ENST00000493683 CFAP70Q5T0N1 1121 aa23.8■■□□□ 1.4
RNF40-203ENST00000493683 CEP57L1Q8IYX8 460 aa23.8■■□□□ 1.4
RNF40-203ENST00000493683 ME1P48163 572 aa23.8■■□□□ 1.4
RNF40-203ENST00000493683 GOLGA6L7A0A1B0GV03 622 aa23.79■■□□□ 1.4
RNF40-203ENST00000493683 BRPF3Q9ULD4 1205 aa23.79■■□□□ 1.4
RNF40-203ENST00000493683 LARP1BQ659C4 914 aaKnown RBP23.79■■□□□ 1.4
RNF40-203ENST00000493683 IKQ13123 557 aaPredicted RBP23.79■■□□□ 1.4
RNF40-203ENST00000493683 CTNNA3Q9UI47 895 aa23.79■■□□□ 1.4
RNF40-203ENST00000493683 RPAP2Q8IXW5 612 aaPredicted RBP23.79■■□□□ 1.4
RNF40-203ENST00000493683 PRDM2Q13029 1718 aa23.79■■□□□ 1.4
RNF40-203ENST00000493683 ATP2B1P20020 1258 aa23.79■■□□□ 1.4
RNF40-203ENST00000493683 ANKRD18AQ8IVF6 992 aa23.78■■□□□ 1.4
RNF40-203ENST00000493683 KIAA0754O94854 1291 aa23.78■■□□□ 1.4
RNF40-203ENST00000493683 PDCL2Q8N4E4 241 aa23.78■■□□□ 1.4
RNF40-203ENST00000493683 SPC24Q8NBT2 197 aa23.78■■□□□ 1.4
RNF40-203ENST00000493683 CCDC181Q5TID7 509 aa23.77■■□□□ 1.4
RNF40-203ENST00000493683 EHBP1L1Q8N3D4 1523 aa23.77■■□□□ 1.4
RNF40-203ENST00000493683 BRPF1P55201 1214 aaPredicted RBP23.77■■□□□ 1.4
RNF40-203ENST00000493683 BLOC1S2Q6QNY1 142 aa23.77■■□□□ 1.4
RNF40-203ENST00000493683 ABTB2Q8N961 1025 aa23.77■■□□□ 1.4
RNF40-203ENST00000493683 SMTNL1A8MU46 457 aa23.77■■□□□ 1.4
RNF40-203ENST00000493683 KIF2AO00139 706 aaPredicted RBP23.77■■□□□ 1.4
RNF40-203ENST00000493683 MCM4P33991 863 aa23.77■■□□□ 1.4
RNF40-203ENST00000493683 EFCAB5A4FU69 1503 aa23.77■■□□□ 1.39
RNF40-203ENST00000493683 SYNJ2O15056 1496 aa23.76■■□□□ 1.39
RNF40-203ENST00000493683 BCAR3O75815 825 aa23.76■■□□□ 1.39
RNF40-203ENST00000493683 C1orf115Q9H7X2 142 aa23.76■■□□□ 1.39
RNF40-203ENST00000493683 TATP17735 454 aaPredicted RBP23.76■■□□□ 1.39
RNF40-203ENST00000493683 CNNM1Q9NRU3 951 aa23.76■■□□□ 1.39
RNF40-203ENST00000493683 CCDC69A6NI79 296 aa23.76■■□□□ 1.39
RNF40-203ENST00000493683 DEF6Q9H4E7 631 aa23.75■■□□□ 1.39
RNF40-203ENST00000493683 SPATA32Q96LK8 384 aa23.75■■□□□ 1.39
RNF40-203ENST00000493683 NUP62CLQ9H1M0 184 aa23.75■■□□□ 1.39
RNF40-203ENST00000493683 WWC2Q6AWC2 1192 aa23.75■■□□□ 1.39
RNF40-203ENST00000493683 AKNAQ7Z591 1439 aa23.75■■□□□ 1.39
RNF40-203ENST00000493683 CCDC57Q2TAC2 916 aa23.75■■□□□ 1.39
RNF40-203ENST00000493683 WASF1Q92558 559 aa23.75■■□□□ 1.39
RNF40-203ENST00000493683 ERBINQ96RT1 1412 aa23.74■■□□□ 1.39
RNF40-203ENST00000493683 PDRG1Q9NUG6 133 aa23.74■■□□□ 1.39
RNF40-203ENST00000493683 USP8P40818 1118 aa23.73■■□□□ 1.39
RNF40-203ENST00000493683 CEBPZQ03701 1054 aaKnown RBP23.73■■□□□ 1.39
RNF40-203ENST00000493683 TSR2Q969E8 191 aaKnown RBP23.73■■□□□ 1.39
RNF40-203ENST00000493683 RPGRIP1LQ68CZ1 1315 aa23.72■■□□□ 1.39
RNF40-203ENST00000493683 ESPNB1AK53 854 aa23.72■■□□□ 1.39
RNF40-203ENST00000493683 RAD54L2Q9Y4B4 1467 aa23.72■■□□□ 1.39
RNF40-203ENST00000493683 ATAD2Q6PL18 1390 aa23.71■■□□□ 1.39
RNF40-203ENST00000493683 RRP9O43818 475 aaKnown RBP23.71■■□□□ 1.39
RNF40-203ENST00000493683 SOGA3Q5TF21 947 aa23.71■■□□□ 1.39
RNF40-203ENST00000493683 PRAM1Q96QH2 718 aa23.71■■□□□ 1.39
RNF40-203ENST00000493683 FCHSD2O94868 740 aa23.7■■□□□ 1.38
RNF40-203ENST00000493683 UQCRHLA0A096LP55 91 aa23.7■■□□□ 1.38
RNF40-203ENST00000493683 UQCRHP07919 91 aa23.7■■□□□ 1.38
RNF40-203ENST00000493683 SAMD1Q6SPF0 538 aaPredicted RBP23.69■■□□□ 1.38
RNF40-203ENST00000493683 UPF3BQ9BZI7 483 aaKnown RBP23.69■■□□□ 1.38
RNF40-203ENST00000493683 C9orf84Q5VXU9 1444 aa23.69■■□□□ 1.38
RNF40-203ENST00000493683 SULT6B1Q6IMI4 303 aa23.69■■□□□ 1.38
RNF40-203ENST00000493683 BMP2KQ9NSY1 1161 aaPredicted RBP23.69■■□□□ 1.38
RNF40-203ENST00000493683 MTMR7Q9Y216 660 aa23.69■■□□□ 1.38
RNF40-203ENST00000493683 GBP3Q9H0R5 595 aa23.69■■□□□ 1.38
RNF40-203ENST00000493683 ANKRD30BQ9BXX2 1392 aa23.69■■□□□ 1.38
RNF40-203ENST00000493683 NUTM2GQ5VZR2 741 aa23.68■■□□□ 1.38
RNF40-203ENST00000493683 SPG7Q9UQ90 795 aa23.68■■□□□ 1.38
RNF40-203ENST00000493683 SLC52A1Q9NWF4 448 aa23.68■■□□□ 1.38
RNF40-203ENST00000493683 ZSCAN30Q86W11 494 aa23.67■■□□□ 1.38
RNF40-203ENST00000493683 CEP131Q9UPN4 1083 aa23.67■■□□□ 1.38
RNF40-203ENST00000493683 PLEKHH1Q9ULM0 1364 aa23.67■■□□□ 1.38
RNF40-203ENST00000493683 STK3Q13188 491 aa23.67■■□□□ 1.38
RNF40-203ENST00000493683 SEPT7Q16181 437 aaKnown RBP23.67■■□□□ 1.38
RNF40-203ENST00000493683 NEFHP12036 1026 aa23.67■■□□□ 1.38
RNF40-203ENST00000493683 RBM10P98175 930 aaKnown RBP23.67■■□□□ 1.38
RNF40-203ENST00000493683 TAF3Q5VWG9 929 aa23.67■■□□□ 1.38
RNF40-203ENST00000493683 MAP3K11Q16584 847 aa23.66■■□□□ 1.38
RNF40-203ENST00000493683 TXNDC2Q86VQ3 553 aa23.66■■□□□ 1.38
RNF40-203ENST00000493683 KRI1Q8N9T8 703 aaKnown RBP23.66■■□□□ 1.38
RNF40-203ENST00000493683 BCL11BQ9C0K0 894 aaPredicted RBP23.66■■□□□ 1.38
RNF40-203ENST00000493683 TMEM132AQ24JP5 1023 aa23.66■■□□□ 1.38
RNF40-203ENST00000493683 GRIN2BQ13224 1484 aa23.66■■□□□ 1.38
RNF40-203ENST00000493683 KDM4AO75164 1064 aa23.66■■□□□ 1.38
RNF40-203ENST00000493683 PDCL3Q9H2J4 239 aa23.66■■□□□ 1.38
RNF40-203ENST00000493683 POLA1P09884 1462 aaPredicted RBP23.66■■□□□ 1.38
RNF40-203ENST00000493683 AACSQ86V21 672 aa23.65■■□□□ 1.38
RNF40-203ENST00000493683 JAKMIP1Q96N16 626 aaKnown RBP23.65■■□□□ 1.38
RNF40-203ENST00000493683 CDK19Q9BWU1 502 aa23.65■■□□□ 1.38
RNF40-203ENST00000493683 CFTRP13569 1480 aa23.65■■□□□ 1.38
RNF40-203ENST00000493683 NBPF1Q3BBV0 1214 aa23.65■■□□□ 1.38
RNF40-203ENST00000493683 TANGO6Q9C0B7 1094 aa23.65■■□□□ 1.38
RNF40-203ENST00000493683 SLC12A5Q9H2X9 1139 aa23.65■■□□□ 1.38
RNF40-203ENST00000493683 CABP4P57796 275 aa23.64■■□□□ 1.37
RNF40-203ENST00000493683 ZNF530Q6P9A1 599 aaPredicted RBP23.64■■□□□ 1.37
RNF40-203ENST00000493683 SRGAP3O43295 1099 aa23.63■■□□□ 1.37
RNF40-203ENST00000493683 ESCO1Q5FWF5 840 aa23.63■■□□□ 1.37
RNF40-203ENST00000493683 PROSER2Q86WR7 435 aaPredicted RBP23.63■■□□□ 1.37
RNF40-203ENST00000493683 SLFN5Q08AF3 891 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms