RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 LRP5O75197 1615 aa18.9■□□□□ 0.62
SNED1-212ENST00000493358 EN1Q05925 392 aaPredicted RBP18.9■□□□□ 0.62
SNED1-212ENST00000493358 RREB1Q92766 1687 aa18.89■□□□□ 0.61
SNED1-212ENST00000493358 C11orf95C9JLR9 678 aaPredicted RBP18.89■□□□□ 0.61
SNED1-212ENST00000493358 TRIM37O94972 964 aa18.89■□□□□ 0.61
SNED1-212ENST00000493358 KAT6BQ8WYB5 2073 aa18.89■□□□□ 0.61
SNED1-212ENST00000493358 SLC24A1O60721 1099 aa18.88■□□□□ 0.61
SNED1-212ENST00000493358 CSB-PGBD3P0DP91 1061 aa18.88■□□□□ 0.61
SNED1-212ENST00000493358 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.88■□□□□ 0.61
SNED1-212ENST00000493358 TERF2IPQ9NYB0 399 aa18.88■□□□□ 0.61
SNED1-212ENST00000493358 WDR17Q8IZU2 1322 aa18.88■□□□□ 0.61
SNED1-212ENST00000493358 OVOS2A0A0G2JMS6 1433 aa18.87■□□□□ 0.61
SNED1-212ENST00000493358 OVOS2A0A0J9YW53 1432 aa18.87■□□□□ 0.61
SNED1-212ENST00000493358 OVOS2Q6IE36 1432 aa18.87■□□□□ 0.61
SNED1-212ENST00000493358 EDC4Q6P2E9 1401 aaKnown RBP18.87■□□□□ 0.61
SNED1-212ENST00000493358 ARHGEF25Q86VW2 580 aa18.87■□□□□ 0.61
SNED1-212ENST00000493358 PARD3Q8TEW0 1356 aa18.87■□□□□ 0.61
SNED1-212ENST00000493358 NUP188Q5SRE5 1749 aa18.86■□□□□ 0.61
SNED1-212ENST00000493358 NINLQ9Y2I6 1382 aa18.86■□□□□ 0.61
SNED1-212ENST00000493358 RGPD3A6NKT7 1758 aaPredicted RBP18.86■□□□□ 0.61
SNED1-212ENST00000493358 RGPD4Q7Z3J3 1758 aa18.86■□□□□ 0.61
SNED1-212ENST00000493358 PEAK1Q9H792 1746 aa18.86■□□□□ 0.61
SNED1-212ENST00000493358 CD163L1Q9NR16 1453 aa18.85■□□□□ 0.61
SNED1-212ENST00000493358 APBA3O96018 575 aa18.85■□□□□ 0.61
SNED1-212ENST00000493358 DDB1Q16531 1140 aa18.85■□□□□ 0.61
SNED1-212ENST00000493358 PUS7Q96PZ0 661 aaKnown RBP18.85■□□□□ 0.61
SNED1-212ENST00000493358 CDCA7Q9BWT1 371 aaPredicted RBP18.85■□□□□ 0.61
SNED1-212ENST00000493358 USP31Q70CQ4 1352 aa18.84■□□□□ 0.61
SNED1-212ENST00000493358 PSDA5PKW4 1024 aaPredicted RBP18.84■□□□□ 0.61
SNED1-212ENST00000493358 A0A1W2PP64 1363 aa18.83■□□□□ 0.61
SNED1-212ENST00000493358 FAM208AQ9UK61 1670 aaKnown RBP18.83■□□□□ 0.61
SNED1-212ENST00000493358 EZH2Q15910 746 aaKnown RBP18.82■□□□□ 0.6
SNED1-212ENST00000493358 NME9Q86XW9 330 aa18.82■□□□□ 0.6
SNED1-212ENST00000493358 SLC12A5Q9H2X9 1139 aa18.82■□□□□ 0.6
SNED1-212ENST00000493358 AXIN2Q9Y2T1 843 aa18.82■□□□□ 0.6
SNED1-212ENST00000493358 CCDC7Q96M83 1385 aa18.81■□□□□ 0.6
SNED1-212ENST00000493358 ST20-MTHFSA0A0A6YYL1 179 aa18.81■□□□□ 0.6
SNED1-212ENST00000493358 KIF20BQ96Q89 1820 aa18.8■□□□□ 0.6
SNED1-212ENST00000493358 CARD10Q9BWT7 1032 aa18.8■□□□□ 0.6
SNED1-212ENST00000493358 CAMKK2Q96RR4 588 aa18.79■□□□□ 0.6
SNED1-212ENST00000493358 USP47Q96K76 1375 aa18.79■□□□□ 0.6
SNED1-212ENST00000493358 R3HDM1Q15032 1099 aaKnown RBP18.78■□□□□ 0.6
SNED1-212ENST00000493358 NBPF14Q5TI25 921 aa18.77■□□□□ 0.6
SNED1-212ENST00000493358 TESK2Q96S53 571 aa18.77■□□□□ 0.6
SNED1-212ENST00000493358 TMF1P82094 1093 aa18.76■□□□□ 0.59
SNED1-212ENST00000493358 TNS2Q63HR2 1409 aa18.75■□□□□ 0.59
SNED1-212ENST00000493358 EXOC5O00471 708 aa18.75■□□□□ 0.59
SNED1-212ENST00000493358 NLRP2Q9NX02 1062 aa18.75■□□□□ 0.59
SNED1-212ENST00000493358 ERBB3P21860 1342 aa18.74■□□□□ 0.59
SNED1-212ENST00000493358 CDCA8Q53HL2 280 aa18.74■□□□□ 0.59
SNED1-212ENST00000493358 COG3Q96JB2 828 aa18.74■□□□□ 0.59
SNED1-212ENST00000493358 ANKRD36BQ8N2N9 1353 aa18.73■□□□□ 0.59
SNED1-212ENST00000493358 NHSQ6T4R5 1651 aa18.73■□□□□ 0.59
SNED1-212ENST00000493358 ANKRD24Q8TF21 1146 aa18.72■□□□□ 0.59
SNED1-212ENST00000493358 RGPD2P0DJD1 1756 aa18.72■□□□□ 0.59
SNED1-212ENST00000493358 BCL9O00512 1426 aa18.72■□□□□ 0.59
SNED1-212ENST00000493358 CLSPNQ9HAW4 1339 aa18.72■□□□□ 0.59
SNED1-212ENST00000493358 MARCH10Q8NA82 808 aaPredicted RBP18.71■□□□□ 0.59
SNED1-212ENST00000493358 PCGF6Q9BYE7 350 aa18.71■□□□□ 0.59
SNED1-212ENST00000493358 BCL11BQ9C0K0 894 aaPredicted RBP18.71■□□□□ 0.59
SNED1-212ENST00000493358 TIMELESSQ9UNS1 1208 aa18.71■□□□□ 0.59
SNED1-212ENST00000493358 MYOM1P52179 1685 aa18.69■□□□□ 0.58
SNED1-212ENST00000493358 IL2RBP14784 551 aa18.69■□□□□ 0.58
SNED1-212ENST00000493358 BTAF1O14981 1849 aa18.69■□□□□ 0.58
SNED1-212ENST00000493358 PLSCR1O15162 318 aa18.68■□□□□ 0.58
SNED1-212ENST00000493358 AMPHP49418 695 aa18.67■□□□□ 0.58
SNED1-212ENST00000493358 IP6K1Q92551 441 aa18.67■□□□□ 0.58
SNED1-212ENST00000493358 LTV1Q96GA3 475 aaPredicted RBP18.66■□□□□ 0.58
SNED1-212ENST00000493358 RTL1A6NKG5 1358 aa18.65■□□□□ 0.58
SNED1-212ENST00000493358 MAP3K19Q56UN5 1328 aa18.64■□□□□ 0.57
SNED1-212ENST00000493358 SMG6Q86US8 1419 aaKnown RBP18.64■□□□□ 0.57
SNED1-212ENST00000493358 DOT1LQ8TEK3 1739 aa18.62■□□□□ 0.57
SNED1-212ENST00000493358 CASZ1Q86V15 1759 aa18.62■□□□□ 0.57
SNED1-212ENST00000493358 MAP2P11137 1827 aaKnown RBP18.62■□□□□ 0.57
SNED1-212ENST00000493358 HOXC9P31274 260 aa18.61■□□□□ 0.57
SNED1-212ENST00000493358 GGNBP2Q9H3C7 697 aa18.61■□□□□ 0.57
SNED1-212ENST00000493358 SHANK3Q9BYB0 1731 aa18.6■□□□□ 0.57
SNED1-212ENST00000493358 PTF1AQ7RTS3 328 aa18.6■□□□□ 0.57
SNED1-212ENST00000493358 ACSBG1Q96GR2 724 aa18.6■□□□□ 0.57
SNED1-212ENST00000493358 PPP1R1BQ9UD71 204 aaPredicted RBP18.6■□□□□ 0.57
SNED1-212ENST00000493358 ANKRD26Q9UPS8 1709 aa18.6■□□□□ 0.57
SNED1-212ENST00000493358 FYB1O15117 783 aa18.59■□□□□ 0.57
SNED1-212ENST00000493358 SPON1Q9HCB6 807 aa18.59■□□□□ 0.57
SNED1-212ENST00000493358 NSD3Q9BZ95 1437 aa18.58■□□□□ 0.57
SNED1-212ENST00000493358 STK32BQ9NY57 414 aa18.58■□□□□ 0.56
SNED1-212ENST00000493358 RRS1Q15050 365 aaKnown RBP18.57■□□□□ 0.56
SNED1-212ENST00000493358 TXNRD1Q16881 649 aa18.57■□□□□ 0.56
SNED1-212ENST00000493358 KCNQ2O43526 872 aa18.56■□□□□ 0.56
SNED1-212ENST00000493358 FBLN1P23142 703 aa18.56■□□□□ 0.56
SNED1-212ENST00000493358 CCER1Q8TC90 406 aaPredicted RBP18.56■□□□□ 0.56
SNED1-212ENST00000493358 DDX54Q8TDD1 881 aaKnown RBP18.56■□□□□ 0.56
SNED1-212ENST00000493358 FLT4P35916 1363 aa18.55■□□□□ 0.56
SNED1-212ENST00000493358 POLR3GLQ9BT43 218 aa18.55■□□□□ 0.56
SNED1-212ENST00000493358 ANO8Q9HCE9 1232 aaPredicted RBP18.55■□□□□ 0.56
SNED1-212ENST00000493358 KIF24Q5T7B8 1368 aa18.55■□□□□ 0.56
SNED1-212ENST00000493358 QSER1Q2KHR3 1735 aa18.54■□□□□ 0.56
SNED1-212ENST00000493358 LY75O60449 1722 aa18.53■□□□□ 0.56
SNED1-212ENST00000493358 PROM2Q8N271 834 aa18.53■□□□□ 0.56
SNED1-212ENST00000493358 RAPGEF4Q8WZA2 1011 aa18.53■□□□□ 0.56
SNED1-212ENST00000493358 MEGF6O75095 1541 aa18.53■□□□□ 0.56
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