RNA–Protein interactions for RNA: ENST00000492932.5

PDCD4-210, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-210ENST00000492932 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.41■□□□□ 0.22
PDCD4-210ENST00000492932 PARP4Q9UKK3 1724 aaKnown RBP16.41■□□□□ 0.22
PDCD4-210ENST00000492932 SLC24A1O60721 1099 aa16.4■□□□□ 0.22
PDCD4-210ENST00000492932 ARHGEF25Q86VW2 580 aa16.4■□□□□ 0.22
PDCD4-210ENST00000492932 CAMKK2Q96RR4 588 aa16.4■□□□□ 0.22
PDCD4-210ENST00000492932 TERF2IPQ9NYB0 399 aa16.4■□□□□ 0.22
PDCD4-210ENST00000492932 OVOS2A0A0G2JMS6 1433 aa16.39■□□□□ 0.21
PDCD4-210ENST00000492932 OVOS2A0A0J9YW53 1432 aa16.39■□□□□ 0.21
PDCD4-210ENST00000492932 OVOS2Q6IE36 1432 aa16.39■□□□□ 0.21
PDCD4-210ENST00000492932 LRP5O75197 1615 aa16.39■□□□□ 0.21
PDCD4-210ENST00000492932 TRIM26Q12899 539 aaPredicted RBP16.39■□□□□ 0.21
PDCD4-210ENST00000492932 AXIN2Q9Y2T1 843 aa16.38■□□□□ 0.21
PDCD4-210ENST00000492932 MON2Q7Z3U7 1717 aa16.37■□□□□ 0.21
PDCD4-210ENST00000492932 PUS7Q96PZ0 661 aaKnown RBP16.36■□□□□ 0.21
PDCD4-210ENST00000492932 CARD10Q9BWT7 1032 aa16.36■□□□□ 0.21
PDCD4-210ENST00000492932 COL18A1P39060 1754 aa16.36■□□□□ 0.21
PDCD4-210ENST00000492932 SLC12A5Q9H2X9 1139 aa16.35■□□□□ 0.21
PDCD4-210ENST00000492932 USP31Q70CQ4 1352 aa16.35■□□□□ 0.21
PDCD4-210ENST00000492932 CCDC7Q96M83 1385 aa16.35■□□□□ 0.21
PDCD4-210ENST00000492932 ABCC6O95255 1503 aa16.35■□□□□ 0.21
PDCD4-210ENST00000492932 LRRC37A3O60309 1634 aa16.34■□□□□ 0.21
PDCD4-210ENST00000492932 EXOC5O00471 708 aa16.34■□□□□ 0.21
PDCD4-210ENST00000492932 NME9Q86XW9 330 aa16.34■□□□□ 0.21
PDCD4-210ENST00000492932 EDC4Q6P2E9 1401 aaKnown RBP16.34■□□□□ 0.21
PDCD4-210ENST00000492932 NINLQ9Y2I6 1382 aa16.33■□□□□ 0.2
PDCD4-210ENST00000492932 NFAT5O94916 1531 aa16.33■□□□□ 0.2
PDCD4-210ENST00000492932 BCL11BQ9C0K0 894 aaPredicted RBP16.32■□□□□ 0.2
PDCD4-210ENST00000492932 WNK3Q9BYP7 1800 aa16.31■□□□□ 0.2
PDCD4-210ENST00000492932 RREB1Q92766 1687 aa16.31■□□□□ 0.2
PDCD4-210ENST00000492932 CD163L1Q9NR16 1453 aa16.31■□□□□ 0.2
PDCD4-210ENST00000492932 A0A1W2PP64 1363 aa16.31■□□□□ 0.2
PDCD4-210ENST00000492932 ST20-MTHFSA0A0A6YYL1 179 aa16.31■□□□□ 0.2
PDCD4-210ENST00000492932 NLRP2Q9NX02 1062 aa16.31■□□□□ 0.2
PDCD4-210ENST00000492932 RGPD5Q99666 1765 aa16.31■□□□□ 0.2
PDCD4-210ENST00000492932 PLSCR1O15162 318 aa16.3■□□□□ 0.2
PDCD4-210ENST00000492932 ERBB3P21860 1342 aa16.29■□□□□ 0.2
PDCD4-210ENST00000492932 PEAK1Q9H792 1746 aa16.29■□□□□ 0.2
PDCD4-210ENST00000492932 MARCH10Q8NA82 808 aaPredicted RBP16.29■□□□□ 0.2
PDCD4-210ENST00000492932 USP54Q70EL1 1684 aa16.29■□□□□ 0.2
PDCD4-210ENST00000492932 NUP188Q5SRE5 1749 aa16.28■□□□□ 0.2
PDCD4-210ENST00000492932 TMF1P82094 1093 aa16.28■□□□□ 0.2
PDCD4-210ENST00000492932 COG3Q96JB2 828 aa16.28■□□□□ 0.2
PDCD4-210ENST00000492932 IL2RBP14784 551 aa16.27■□□□□ 0.2
PDCD4-210ENST00000492932 ANKRD24Q8TF21 1146 aa16.27■□□□□ 0.2
PDCD4-210ENST00000492932 LTN1O94822 1766 aa16.27■□□□□ 0.2
PDCD4-210ENST00000492932 SRCAPQ6ZRS2 3230 aa16.27■□□□□ 0.19
PDCD4-210ENST00000492932 BCL9O00512 1426 aa16.27■□□□□ 0.19
PDCD4-210ENST00000492932 RGPD3A6NKT7 1758 aaPredicted RBP16.26■□□□□ 0.19
PDCD4-210ENST00000492932 RGPD4Q7Z3J3 1758 aa16.26■□□□□ 0.19
PDCD4-210ENST00000492932 CDCA8Q53HL2 280 aa16.26■□□□□ 0.19
PDCD4-210ENST00000492932 TESK2Q96S53 571 aa16.26■□□□□ 0.19
PDCD4-210ENST00000492932 PPP1R1BQ9UD71 204 aaPredicted RBP16.26■□□□□ 0.19
PDCD4-210ENST00000492932 TNS2Q63HR2 1409 aa16.26■□□□□ 0.19
PDCD4-210ENST00000492932 SBF2Q86WG5 1849 aa16.25■□□□□ 0.19
PDCD4-210ENST00000492932 SPON1Q9HCB6 807 aa16.25■□□□□ 0.19
PDCD4-210ENST00000492932 AMPHP49418 695 aa16.24■□□□□ 0.19
PDCD4-210ENST00000492932 IP6K1Q92551 441 aa16.23■□□□□ 0.19
PDCD4-210ENST00000492932 ANKRD36BQ8N2N9 1353 aa16.23■□□□□ 0.19
PDCD4-210ENST00000492932 USP47Q96K76 1375 aa16.23■□□□□ 0.19
PDCD4-210ENST00000492932 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
PDCD4-210ENST00000492932 KCNQ2O43526 872 aa16.22■□□□□ 0.19
PDCD4-210ENST00000492932 LTV1Q96GA3 475 aaPredicted RBP16.22■□□□□ 0.19
PDCD4-210ENST00000492932 STK32BQ9NY57 414 aa16.21■□□□□ 0.19
PDCD4-210ENST00000492932 TXNRD1Q16881 649 aa16.2■□□□□ 0.18
PDCD4-210ENST00000492932 PTF1AQ7RTS3 328 aa16.2■□□□□ 0.18
PDCD4-210ENST00000492932 ACSBG1Q96GR2 724 aa16.2■□□□□ 0.18
PDCD4-210ENST00000492932 TIMELESSQ9UNS1 1208 aa16.2■□□□□ 0.18
PDCD4-210ENST00000492932 FAM208AQ9UK61 1670 aaKnown RBP16.19■□□□□ 0.18
PDCD4-210ENST00000492932 DDX54Q8TDD1 881 aaKnown RBP16.18■□□□□ 0.18
PDCD4-210ENST00000492932 MAP3K19Q56UN5 1328 aa16.18■□□□□ 0.18
PDCD4-210ENST00000492932 HOXC9P31274 260 aa16.17■□□□□ 0.18
PDCD4-210ENST00000492932 PCGF6Q9BYE7 350 aa16.17■□□□□ 0.18
PDCD4-210ENST00000492932 ANO8Q9HCE9 1232 aaPredicted RBP16.17■□□□□ 0.18
PDCD4-210ENST00000492932 SMG6Q86US8 1419 aaKnown RBP16.17■□□□□ 0.18
PDCD4-210ENST00000492932 NHSQ6T4R5 1651 aa16.17■□□□□ 0.18
PDCD4-210ENST00000492932 RTL1A6NKG5 1358 aa16.16■□□□□ 0.18
PDCD4-210ENST00000492932 PROM2Q8N271 834 aa16.16■□□□□ 0.18
PDCD4-210ENST00000492932 GGNBP2Q9H3C7 697 aa16.16■□□□□ 0.18
PDCD4-210ENST00000492932 CLSPNQ9HAW4 1339 aa16.16■□□□□ 0.18
PDCD4-210ENST00000492932 SLC15A2Q16348 729 aa16.15■□□□□ 0.18
PDCD4-210ENST00000492932 FYB1O15117 783 aa16.14■□□□□ 0.17
PDCD4-210ENST00000492932 RRS1Q15050 365 aaKnown RBP16.13■□□□□ 0.17
PDCD4-210ENST00000492932 SYTL4Q96C24 671 aaPredicted RBP16.13■□□□□ 0.17
PDCD4-210ENST00000492932 ZBTB7AO95365 584 aa16.12■□□□□ 0.17
PDCD4-210ENST00000492932 FBLN1P23142 703 aa16.12■□□□□ 0.17
PDCD4-210ENST00000492932 ZCRB1Q8TBF4 217 aaKnown RBP16.12■□□□□ 0.17
PDCD4-210ENST00000492932 RAPGEF4Q8WZA2 1011 aa16.12■□□□□ 0.17
PDCD4-210ENST00000492932 CGNL1Q0VF96 1302 aa16.11■□□□□ 0.17
PDCD4-210ENST00000492932 ATF5Q9Y2D1 282 aaPredicted RBP16.1■□□□□ 0.17
PDCD4-210ENST00000492932 CASZ1Q86V15 1759 aa16.1■□□□□ 0.17
PDCD4-210ENST00000492932 TATP17735 454 aaPredicted RBP16.09■□□□□ 0.17
PDCD4-210ENST00000492932 SLC27A3Q5K4L6 730 aa16.09■□□□□ 0.17
PDCD4-210ENST00000492932 MTFR1LQ9H019 292 aa16.09■□□□□ 0.17
PDCD4-210ENST00000492932 BTAF1O14981 1849 aa16.09■□□□□ 0.17
PDCD4-210ENST00000492932 KIF20BQ96Q89 1820 aa16.09■□□□□ 0.17
PDCD4-210ENST00000492932 FLT4P35916 1363 aa16.09■□□□□ 0.17
PDCD4-210ENST00000492932 KIF24Q5T7B8 1368 aa16.09■□□□□ 0.17
PDCD4-210ENST00000492932 POLR3GLQ9BT43 218 aa16.08■□□□□ 0.16
PDCD4-210ENST00000492932 PRIM1P49642 420 aaKnown RBP16.07■□□□□ 0.16
PDCD4-210ENST00000492932 NBPF6Q5VWK0 638 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms