RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 KIAA0232Q92628 1395 aa14.26□□□□□ -0.13
TNFRSF9-203ENST00000492571 C11orf95C9JLR9 678 aaPredicted RBP14.26□□□□□ -0.13
TNFRSF9-203ENST00000492571 COL14A1Q05707 1796 aaKnown RBP14.26□□□□□ -0.13
TNFRSF9-203ENST00000492571 PRR36Q9H6K5 1346 aa14.25□□□□□ -0.13
TNFRSF9-203ENST00000492571 BARGINQ6ZT62 677 aa14.25□□□□□ -0.13
TNFRSF9-203ENST00000492571 NUDT16Q96DE0 195 aaKnown RBP14.25□□□□□ -0.13
TNFRSF9-203ENST00000492571 SPON1Q9HCB6 807 aa14.24□□□□□ -0.13
TNFRSF9-203ENST00000492571 RGPD8O14715 1765 aaPredicted RBP14.24□□□□□ -0.13
TNFRSF9-203ENST00000492571 RGPD1P0DJD0 1748 aa14.24□□□□□ -0.13
TNFRSF9-203ENST00000492571 MAP3K13O43283 966 aa14.23□□□□□ -0.13
TNFRSF9-203ENST00000492571 ATMINO43313 823 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF9-203ENST00000492571 NUTM2GQ5VZR2 741 aa14.23□□□□□ -0.13
TNFRSF9-203ENST00000492571 ASTLQ6HA08 431 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF9-203ENST00000492571 TCP11L2Q8N4U5 519 aa14.23□□□□□ -0.13
TNFRSF9-203ENST00000492571 ABTB2Q8N961 1025 aa14.23□□□□□ -0.13
TNFRSF9-203ENST00000492571 ADGRB2O60241 1585 aa14.22□□□□□ -0.13
TNFRSF9-203ENST00000492571 TULP4Q9NRJ4 1543 aa14.22□□□□□ -0.13
TNFRSF9-203ENST00000492571 ZBTB47Q9UFB7 747 aaPredicted RBP14.22□□□□□ -0.13
TNFRSF9-203ENST00000492571 THRAP3Q9Y2W1 955 aaKnown RBP14.22□□□□□ -0.13
TNFRSF9-203ENST00000492571 POTEB2H3BUK9 544 aa14.21□□□□□ -0.13
TNFRSF9-203ENST00000492571 CDK19Q9BWU1 502 aa14.21□□□□□ -0.13
TNFRSF9-203ENST00000492571 TRPC6Q9Y210 931 aa14.21□□□□□ -0.13
TNFRSF9-203ENST00000492571 ABCA3Q99758 1704 aa14.21□□□□□ -0.14
TNFRSF9-203ENST00000492571 KCNQ2O43526 872 aa14.2□□□□□ -0.14
TNFRSF9-203ENST00000492571 NLRP13Q86W25 1043 aa14.2□□□□□ -0.14
TNFRSF9-203ENST00000492571 NRAPQ86VF7 1730 aa14.2□□□□□ -0.14
TNFRSF9-203ENST00000492571 LARP1Q6PKG0 1096 aaKnown RBP14.19□□□□□ -0.14
TNFRSF9-203ENST00000492571 FBXO3Q9UK99 471 aa14.19□□□□□ -0.14
TNFRSF9-203ENST00000492571 ACEP12821 1306 aa14.18□□□□□ -0.14
TNFRSF9-203ENST00000492571 ATP7BP35670 1465 aa14.18□□□□□ -0.14
TNFRSF9-203ENST00000492571 SSH2Q76I76 1423 aa14.17□□□□□ -0.14
TNFRSF9-203ENST00000492571 TRPM3Q9HCF6 1732 aaPredicted RBP14.17□□□□□ -0.14
TNFRSF9-203ENST00000492571 ADGRB1O14514 1584 aa14.17□□□□□ -0.14
TNFRSF9-203ENST00000492571 ALS2Q96Q42 1657 aa14.17□□□□□ -0.14
TNFRSF9-203ENST00000492571 THSD7AQ9UPZ6 1657 aa14.17□□□□□ -0.14
TNFRSF9-203ENST00000492571 PLEKHG3A1L390 1219 aa14.16□□□□□ -0.14
TNFRSF9-203ENST00000492571 GCP02774 474 aa14.16□□□□□ -0.14
TNFRSF9-203ENST00000492571 ZBTB7CA1YPR0 619 aa14.15□□□□□ -0.14
TNFRSF9-203ENST00000492571 SRPK2P78362 688 aaKnown RBP14.15□□□□□ -0.14
TNFRSF9-203ENST00000492571 POLR3AO14802 1390 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF9-203ENST00000492571 CPDO75976 1380 aa14.14□□□□□ -0.15
TNFRSF9-203ENST00000492571 NINLQ9Y2I6 1382 aa14.14□□□□□ -0.15
TNFRSF9-203ENST00000492571 PLSCR1O15162 318 aa14.14□□□□□ -0.15
TNFRSF9-203ENST00000492571 ATN1P54259 1190 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF9-203ENST00000492571 RAB3GAP2Q9H2M9 1393 aa14.13□□□□□ -0.15
TNFRSF9-203ENST00000492571 DDB1Q16531 1140 aa14.13□□□□□ -0.15
TNFRSF9-203ENST00000492571 BCL11BQ9C0K0 894 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF9-203ENST00000492571 TOM1L2Q6ZVM7 507 aa14.12□□□□□ -0.15
TNFRSF9-203ENST00000492571 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
TNFRSF9-203ENST00000492571 NLRP6P59044 892 aa14.11□□□□□ -0.15
TNFRSF9-203ENST00000492571 CDCA7Q9BWT1 371 aaPredicted RBP14.11□□□□□ -0.15
TNFRSF9-203ENST00000492571 TNS1Q9HBL0 1735 aaKnown RBP14.11□□□□□ -0.15
TNFRSF9-203ENST00000492571 METRNQ9UJH8 293 aa14.11□□□□□ -0.15
TNFRSF9-203ENST00000492571 OVOS2A0A0G2JMS6 1433 aa14.1□□□□□ -0.15
TNFRSF9-203ENST00000492571 OVOS2A0A0J9YW53 1432 aa14.1□□□□□ -0.15
TNFRSF9-203ENST00000492571 OVOS2Q6IE36 1432 aa14.1□□□□□ -0.15
TNFRSF9-203ENST00000492571 USP19O94966 1318 aa14.1□□□□□ -0.15
TNFRSF9-203ENST00000492571 BRD4O60885 1362 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF9-203ENST00000492571 CRB1P82279 1406 aa14.09□□□□□ -0.15
TNFRSF9-203ENST00000492571 VASPP50552 380 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF9-203ENST00000492571 OTUD5Q96G74 571 aa14.09□□□□□ -0.15
TNFRSF9-203ENST00000492571 CAMTA1Q9Y6Y1 1673 aa14.09□□□□□ -0.15
TNFRSF9-203ENST00000492571 SLC39A7Q92504 469 aa14.08□□□□□ -0.16
TNFRSF9-203ENST00000492571 FAM212AQ96EL1 285 aa14.08□□□□□ -0.16
TNFRSF9-203ENST00000492571 STK32BQ9NY57 414 aa14.08□□□□□ -0.16
TNFRSF9-203ENST00000492571 ITSN1Q15811 1721 aa14.07□□□□□ -0.16
TNFRSF9-203ENST00000492571 CSB-PGBD3P0DP91 1061 aa14.07□□□□□ -0.16
TNFRSF9-203ENST00000492571 PPIP5K1Q6PFW1 1433 aa14.07□□□□□ -0.16
TNFRSF9-203ENST00000492571 ZBTB7AO95365 584 aa14.06□□□□□ -0.16
TNFRSF9-203ENST00000492571 C7P10643 843 aa14.06□□□□□ -0.16
TNFRSF9-203ENST00000492571 CABP2Q9NPB3 220 aa14.06□□□□□ -0.16
TNFRSF9-203ENST00000492571 CABP1Q9NZU7 370 aa14.06□□□□□ -0.16
TNFRSF9-203ENST00000492571 PCDHB13Q9Y5F0 798 aa14.06□□□□□ -0.16
TNFRSF9-203ENST00000492571 AATKQ6ZMQ8 1374 aa14.06□□□□□ -0.16
TNFRSF9-203ENST00000492571 COL5A2P05997 1499 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF9-203ENST00000492571 CRYBG1Q9Y4K1 1723 aa14.05□□□□□ -0.16
TNFRSF9-203ENST00000492571 EXOC5O00471 708 aa14.05□□□□□ -0.16
TNFRSF9-203ENST00000492571 TIE1P35590 1138 aa14.05□□□□□ -0.16
TNFRSF9-203ENST00000492571 KCNH5Q8NCM2 988 aa14.05□□□□□ -0.16
TNFRSF9-203ENST00000492571 CENPJQ9HC77 1338 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF9-203ENST00000492571 PHRF1Q9P1Y6 1649 aaKnown RBP14.04□□□□□ -0.16
TNFRSF9-203ENST00000492571 POTEJP0CG39 1038 aa14.03□□□□□ -0.16
TNFRSF9-203ENST00000492571 SGIP1Q9BQI5 828 aa14.03□□□□□ -0.16
TNFRSF9-203ENST00000492571 ANO8Q9HCE9 1232 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF9-203ENST00000492571 WDR17Q8IZU2 1322 aa14.03□□□□□ -0.16
TNFRSF9-203ENST00000492571 NRKQ7Z2Y5 1582 aa14.02□□□□□ -0.16
TNFRSF9-203ENST00000492571 SLC15A2Q16348 729 aa14.02□□□□□ -0.17
TNFRSF9-203ENST00000492571 TXNRD1Q16881 649 aa14.02□□□□□ -0.17
TNFRSF9-203ENST00000492571 NBPF1Q3BBV0 1214 aa14.02□□□□□ -0.17
TNFRSF9-203ENST00000492571 IFNL1Q8IU54 200 aa14.02□□□□□ -0.17
TNFRSF9-203ENST00000492571 MARCH10Q8NA82 808 aaPredicted RBP14.02□□□□□ -0.17
TNFRSF9-203ENST00000492571 RREB1Q92766 1687 aa14.01□□□□□ -0.17
TNFRSF9-203ENST00000492571 POTEFA5A3E0 1075 aa14.01□□□□□ -0.17
TNFRSF9-203ENST00000492571 TTLL13PA6NNM8 815 aa14.01□□□□□ -0.17
TNFRSF9-203ENST00000492571 DCAF8Q5TAQ9 597 aa14.01□□□□□ -0.17
TNFRSF9-203ENST00000492571 ZNF784Q8NCA9 323 aaPredicted RBP14.01□□□□□ -0.17
TNFRSF9-203ENST00000492571 CARD10Q9BWT7 1032 aa14.01□□□□□ -0.17
TNFRSF9-203ENST00000492571 MTFR1LQ9H019 292 aa14.01□□□□□ -0.17
TNFRSF9-203ENST00000492571 NUP188Q5SRE5 1749 aa14.01□□□□□ -0.17
TNFRSF9-203ENST00000492571 EVC2Q86UK5 1308 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms