RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 FAM208AQ9UK61 1670 aaKnown RBP18.23■□□□□ 0.51
PTPRE-210ENST00000492479 AMPHP49418 695 aa18.23■□□□□ 0.51
PTPRE-210ENST00000492479 EIF4A2Q14240 407 aaKnown RBP18.23■□□□□ 0.51
PTPRE-210ENST00000492479 HSP90AB2PQ58FF8 381 aa18.23■□□□□ 0.51
PTPRE-210ENST00000492479 NGEFQ8N5V2 710 aa18.23■□□□□ 0.51
PTPRE-210ENST00000492479 KDRP35968 1356 aa18.22■□□□□ 0.51
PTPRE-210ENST00000492479 PPM1GO15355 546 aaPredicted RBP18.21■□□□□ 0.51
PTPRE-210ENST00000492479 FCHSD2O94868 740 aa18.21■□□□□ 0.51
PTPRE-210ENST00000492479 ZBED9Q6R2W3 1325 aa18.21■□□□□ 0.51
PTPRE-210ENST00000492479 SOX12O15370 315 aa18.2■□□□□ 0.5
PTPRE-210ENST00000492479 IGSF1Q8N6C5 1336 aa18.2■□□□□ 0.5
PTPRE-210ENST00000492479 PLEKHF1Q96S99 279 aa18.19■□□□□ 0.5
PTPRE-210ENST00000492479 PNNQ9H307 717 aaKnown RBP18.19■□□□□ 0.5
PTPRE-210ENST00000492479 RGPD5Q99666 1765 aa18.19■□□□□ 0.5
PTPRE-210ENST00000492479 PLEKHG2Q9H7P9 1386 aa18.18■□□□□ 0.5
PTPRE-210ENST00000492479 U2AF1L5P0DN76 240 aaPredicted RBP18.18■□□□□ 0.5
PTPRE-210ENST00000492479 PIP4K2BP78356 416 aa18.18■□□□□ 0.5
PTPRE-210ENST00000492479 HNRNPUQ00839 825 aaKnown RBP eCLIP18.18■□□□□ 0.5
PTPRE-210ENST00000492479 U2AF1Q01081 240 aaKnown RBP eCLIP18.18■□□□□ 0.5
PTPRE-210ENST00000492479 RUNDC1Q96C34 613 aa18.18■□□□□ 0.5
PTPRE-210ENST00000492479 KIAA0232Q92628 1395 aa18.17■□□□□ 0.5
PTPRE-210ENST00000492479 CABLES1Q8TDN4 633 aa18.17■□□□□ 0.5
PTPRE-210ENST00000492479 RSPH6AQ9H0K4 717 aa18.17■□□□□ 0.5
PTPRE-210ENST00000492479 COL14A1Q05707 1796 aaKnown RBP18.17■□□□□ 0.5
PTPRE-210ENST00000492479 YTHDC1Q96MU7 727 aaKnown RBP18.16■□□□□ 0.5
PTPRE-210ENST00000492479 JCADQ9P266 1359 aa18.16■□□□□ 0.5
PTPRE-210ENST00000492479 U2SURPO15042 1029 aaKnown RBP18.15■□□□□ 0.5
PTPRE-210ENST00000492479 ERBB3P21860 1342 aa18.15■□□□□ 0.5
PTPRE-210ENST00000492479 ZC3H6P61129 1189 aaKnown RBP18.14■□□□□ 0.49
PTPRE-210ENST00000492479 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.49
PTPRE-210ENST00000492479 AXIN2Q9Y2T1 843 aa18.14■□□□□ 0.49
PTPRE-210ENST00000492479 EYA1Q99502 592 aa18.13■□□□□ 0.49
PTPRE-210ENST00000492479 RGPD2P0DJD1 1756 aa18.12■□□□□ 0.49
PTPRE-210ENST00000492479 CCDC27Q2M243 656 aa18.12■□□□□ 0.49
PTPRE-210ENST00000492479 ZNF521Q96K83 1311 aa18.12■□□□□ 0.49
PTPRE-210ENST00000492479 COL5A2P05997 1499 aaPredicted RBP18.12■□□□□ 0.49
PTPRE-210ENST00000492479 ANKRD24Q8TF21 1146 aa18.11■□□□□ 0.49
PTPRE-210ENST00000492479 PRDM11Q9NQV5 511 aa18.11■□□□□ 0.49
PTPRE-210ENST00000492479 NWD2Q9ULI1 1742 aa18.1■□□□□ 0.49
PTPRE-210ENST00000492479 SPATA31A6Q5VVP1 1343 aa18.09■□□□□ 0.49
PTPRE-210ENST00000492479 APAF1O14727 1248 aa18.09■□□□□ 0.49
PTPRE-210ENST00000492479 PRKAR2BP31323 418 aa18.09■□□□□ 0.49
PTPRE-210ENST00000492479 SULT6B1Q6IMI4 303 aa18.09■□□□□ 0.49
PTPRE-210ENST00000492479 CCDC146Q8IYE0 955 aa18.09■□□□□ 0.49
PTPRE-210ENST00000492479 TCP11L2Q8N4U5 519 aa18.09■□□□□ 0.49
PTPRE-210ENST00000492479 PLCH1Q4KWH8 1693 aa18.09■□□□□ 0.49
PTPRE-210ENST00000492479 PDE3BQ13370 1112 aa18.08■□□□□ 0.48
PTPRE-210ENST00000492479 NRAPQ86VF7 1730 aa18.07■□□□□ 0.48
PTPRE-210ENST00000492479 MAPK8IP3Q9UPT6 1336 aa18.07■□□□□ 0.48
PTPRE-210ENST00000492479 FAM83GA6ND36 823 aa18.07■□□□□ 0.48
PTPRE-210ENST00000492479 CENPBP07199 599 aaPredicted RBP18.07■□□□□ 0.48
PTPRE-210ENST00000492479 HMOX1P09601 288 aa18.07■□□□□ 0.48
PTPRE-210ENST00000492479 HAP1P54257 671 aaPredicted RBP18.07■□□□□ 0.48
PTPRE-210ENST00000492479 NBPF6Q5VWK0 638 aa18.07■□□□□ 0.48
PTPRE-210ENST00000492479 AEBP1Q8IUX7 1158 aa18.07■□□□□ 0.48
PTPRE-210ENST00000492479 NBPF4Q96M43 638 aa18.07■□□□□ 0.48
PTPRE-210ENST00000492479 DLG5Q8TDM6 1919 aa18.06■□□□□ 0.48
PTPRE-210ENST00000492479 WDR17Q8IZU2 1322 aa18.06■□□□□ 0.48
PTPRE-210ENST00000492479 CHRNA2Q15822 529 aa18.06■□□□□ 0.48
PTPRE-210ENST00000492479 SLIT2O94813 1529 aa18.05■□□□□ 0.48
PTPRE-210ENST00000492479 TMPOP42166 694 aaKnown RBP18.05■□□□□ 0.48
PTPRE-210ENST00000492479 NEFMP07197 916 aa18.04■□□□□ 0.48
PTPRE-210ENST00000492479 NFE2L2Q16236 605 aa18.04■□□□□ 0.48
PTPRE-210ENST00000492479 PHACTR3Q96KR7 559 aa18.04■□□□□ 0.48
PTPRE-210ENST00000492479 ZBTB7CA1YPR0 619 aa18.03■□□□□ 0.48
PTPRE-210ENST00000492479 HSPA1LP34931 641 aa18.03■□□□□ 0.48
PTPRE-210ENST00000492479 LTV1Q96GA3 475 aaPredicted RBP18.03■□□□□ 0.48
PTPRE-210ENST00000492479 PKD1L3Q7Z443 1732 aa18.03■□□□□ 0.48
PTPRE-210ENST00000492479 PLEKHG5O94827 1062 aa18.02■□□□□ 0.48
PTPRE-210ENST00000492479 WWC1Q8IX03 1113 aa18.02■□□□□ 0.48
PTPRE-210ENST00000492479 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.02■□□□□ 0.48
PTPRE-210ENST00000492479 PARP4Q9UKK3 1724 aaKnown RBP18.01■□□□□ 0.47
PTPRE-210ENST00000492479 CRB1P82279 1406 aa18.01■□□□□ 0.47
PTPRE-210ENST00000492479 WDR63Q8IWG1 891 aa18.01■□□□□ 0.47
PTPRE-210ENST00000492479 CARD10Q9BWT7 1032 aa18.01■□□□□ 0.47
PTPRE-210ENST00000492479 LRP6O75581 1613 aa18.01■□□□□ 0.47
PTPRE-210ENST00000492479 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18■□□□□ 0.47
PTPRE-210ENST00000492479 TRIM35Q9UPQ4 493 aa18■□□□□ 0.47
PTPRE-210ENST00000492479 IL16Q14005 1332 aa17.99■□□□□ 0.47
PTPRE-210ENST00000492479 LRRC37A3O60309 1634 aa17.99■□□□□ 0.47
PTPRE-210ENST00000492479 LMOD3Q0VAK6 560 aa17.99■□□□□ 0.47
PTPRE-210ENST00000492479 GAS2L2Q8NHY3 880 aa17.99■□□□□ 0.47
PTPRE-210ENST00000492479 ADAMTS7Q9UKP4 1686 aa17.99■□□□□ 0.47
PTPRE-210ENST00000492479 WNK3Q9BYP7 1800 aa17.98■□□□□ 0.47
PTPRE-210ENST00000492479 HTATSF1O43719 755 aaKnown RBP17.98■□□□□ 0.47
PTPRE-210ENST00000492479 AMOTQ4VCS5 1084 aa17.98■□□□□ 0.47
PTPRE-210ENST00000492479 TRMT2AQ8IZ69 625 aaKnown RBP17.98■□□□□ 0.47
PTPRE-210ENST00000492479 RIPK4P57078 832 aa17.97■□□□□ 0.47
PTPRE-210ENST00000492479 GOLGA2Q08379 1002 aa17.97■□□□□ 0.47
PTPRE-210ENST00000492479 NLRP2Q9NX02 1062 aa17.97■□□□□ 0.47
PTPRE-210ENST00000492479 BTG4Q9NY30 223 aa17.97■□□□□ 0.47
PTPRE-210ENST00000492479 MEGF6O75095 1541 aa17.97■□□□□ 0.47
PTPRE-210ENST00000492479 OVOS2A0A0G2JMS6 1433 aa17.97■□□□□ 0.47
PTPRE-210ENST00000492479 CSB-PGBD3P0DP91 1061 aa17.96■□□□□ 0.47
PTPRE-210ENST00000492479 MTHFSDQ2M296 383 aaKnown RBP17.96■□□□□ 0.47
PTPRE-210ENST00000492479 USHBP1Q8N6Y0 703 aa17.96■□□□□ 0.47
PTPRE-210ENST00000492479 RRP7AQ9Y3A4 280 aaKnown RBP17.96■□□□□ 0.47
PTPRE-210ENST00000492479 DISP2A7MBM2 1401 aa17.96■□□□□ 0.47
PTPRE-210ENST00000492479 FNBP4Q8N3X1 1017 aaPredicted RBP17.95■□□□□ 0.46
PTPRE-210ENST00000492479 E9PSI1 815 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms