RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 CCDC173Q0VFZ6 552 aa13.02□□□□□ -0.32
SREBF2-208ENST00000491541 NSD3Q9BZ95 1437 aa13.02□□□□□ -0.33
SREBF2-208ENST00000491541 KIAA0232Q92628 1395 aa13.02□□□□□ -0.33
SREBF2-208ENST00000491541 GRPEL1Q9HAV7 217 aa13.01□□□□□ -0.33
SREBF2-208ENST00000491541 KLHL40Q2TBA0 621 aa13.01□□□□□ -0.33
SREBF2-208ENST00000491541 ADGRL3Q9HAR2 1447 aa13□□□□□ -0.33
SREBF2-208ENST00000491541 NOL7Q9UMY1 257 aaKnown RBP13□□□□□ -0.33
SREBF2-208ENST00000491541 ZNF853P0CG23 659 aa13□□□□□ -0.33
SREBF2-208ENST00000491541 SMAP1Q8IYB5 467 aaPredicted RBP12.99□□□□□ -0.33
SREBF2-208ENST00000491541 CFAP44Q96MT7 982 aa12.99□□□□□ -0.33
SREBF2-208ENST00000491541 SPRYD3Q8NCJ5 442 aa12.99□□□□□ -0.33
SREBF2-208ENST00000491541 GOLGA6L3A6NEY3 463 aa12.98□□□□□ -0.33
SREBF2-208ENST00000491541 ESPNB1AK53 854 aa12.98□□□□□ -0.33
SREBF2-208ENST00000491541 TMEM87AQ8NBN3 555 aa12.98□□□□□ -0.33
SREBF2-208ENST00000491541 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
SREBF2-208ENST00000491541 RLBP1P12271 317 aa12.97□□□□□ -0.33
SREBF2-208ENST00000491541 PIK3C2AO00443 1686 aa12.97□□□□□ -0.33
SREBF2-208ENST00000491541 RIPK4P57078 832 aa12.97□□□□□ -0.33
SREBF2-208ENST00000491541 SALL3Q9BXA9 1300 aa12.96□□□□□ -0.33
SREBF2-208ENST00000491541 KDM2AQ9Y2K7 1162 aa12.96□□□□□ -0.33
SREBF2-208ENST00000491541 PDZRN3Q9UPQ7 1066 aa12.96□□□□□ -0.33
SREBF2-208ENST00000491541 NWD1Q149M9 1564 aa12.96□□□□□ -0.34
SREBF2-208ENST00000491541 BCAR3O75815 825 aa12.96□□□□□ -0.34
SREBF2-208ENST00000491541 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.95□□□□□ -0.34
SREBF2-208ENST00000491541 RWDD1Q9H446 243 aaPredicted RBP12.95□□□□□ -0.34
SREBF2-208ENST00000491541 FAM53CQ9NYF3 392 aa12.95□□□□□ -0.34
SREBF2-208ENST00000491541 UBR1Q8IWV7 1749 aa12.95□□□□□ -0.34
SREBF2-208ENST00000491541 TRAK2O60296 914 aa12.95□□□□□ -0.34
SREBF2-208ENST00000491541 SYCP1Q15431 976 aa12.94□□□□□ -0.34
SREBF2-208ENST00000491541 OSBPL3Q9H4L5 887 aa12.94□□□□□ -0.34
SREBF2-208ENST00000491541 TRIM35Q9UPQ4 493 aa12.94□□□□□ -0.34
SREBF2-208ENST00000491541 CFAP65Q6ZU64 1925 aaKnown RBP12.94□□□□□ -0.34
SREBF2-208ENST00000491541 HNRNPMP52272 730 aaKnown RBP eCLIP12.93□□□□□ -0.346e-8■■□□□ 13.5
SREBF2-208ENST00000491541 SPTLC3Q9NUV7 552 aa12.93□□□□□ -0.34
SREBF2-208ENST00000491541 KNSTRNQ9Y448 316 aa12.93□□□□□ -0.34
SREBF2-208ENST00000491541 FAM193AP78312 1265 aa12.93□□□□□ -0.34
SREBF2-208ENST00000491541 KCND1Q9NSA2 647 aa12.93□□□□□ -0.34
SREBF2-208ENST00000491541 ZSCAN30Q86W11 494 aa12.92□□□□□ -0.34
SREBF2-208ENST00000491541 GAS2L3Q86XJ1 694 aa12.92□□□□□ -0.34
SREBF2-208ENST00000491541 NCAPD2Q15021 1401 aa12.92□□□□□ -0.34
SREBF2-208ENST00000491541 PODXL2Q9NZ53 605 aa12.91□□□□□ -0.34
SREBF2-208ENST00000491541 GCC1Q96CN9 775 aa12.91□□□□□ -0.34
SREBF2-208ENST00000491541 C22orf23Q9BZE7 217 aa12.91□□□□□ -0.34
SREBF2-208ENST00000491541 DYNC1I1O14576 645 aa12.91□□□□□ -0.34
SREBF2-208ENST00000491541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.91□□□□□ -0.342e-6■■■■□ 26
SREBF2-208ENST00000491541 CANXP27824 592 aaKnown RBP12.9□□□□□ -0.34
SREBF2-208ENST00000491541 TRIM44Q96DX7 344 aaPredicted RBP12.9□□□□□ -0.34
SREBF2-208ENST00000491541 DDX19BQ9UMR2 479 aa12.9□□□□□ -0.34
SREBF2-208ENST00000491541 ARID3AQ99856 593 aa12.9□□□□□ -0.34
SREBF2-208ENST00000491541 CC2D1BQ5T0F9 858 aaKnown RBP12.9□□□□□ -0.35
SREBF2-208ENST00000491541 A2ML1A8K2U0 1454 aa12.89□□□□□ -0.35
SREBF2-208ENST00000491541 WDR43Q15061 677 aaKnown RBP eCLIP12.89□□□□□ -0.351e-7■■■■■ 35
SREBF2-208ENST00000491541 MYH16Q9H6N6 1097 aa12.89□□□□□ -0.35
SREBF2-208ENST00000491541 UPF2Q9HAU5 1272 aaKnown RBP12.89□□□□□ -0.35
SREBF2-208ENST00000491541 RPAP1Q9BWH6 1393 aaPredicted RBP12.89□□□□□ -0.35
SREBF2-208ENST00000491541 CUL4AQ13619 759 aa12.88□□□□□ -0.35
SREBF2-208ENST00000491541 TNPO1Q92973 898 aaKnown RBP12.88□□□□□ -0.35
SREBF2-208ENST00000491541 SIRT1Q96EB6 747 aa12.88□□□□□ -0.35
SREBF2-208ENST00000491541 SENP3Q9H4L4 574 aaPredicted RBP12.88□□□□□ -0.35
SREBF2-208ENST00000491541 CWC22Q9HCG8 908 aaKnown RBP12.88□□□□□ -0.35
SREBF2-208ENST00000491541 SPEF2Q9C093 1822 aa12.88□□□□□ -0.35
SREBF2-208ENST00000491541 JCADQ9P266 1359 aa12.87□□□□□ -0.35
SREBF2-208ENST00000491541 A0A0U1RQG5 324 aaPredicted RBP12.87□□□□□ -0.35
SREBF2-208ENST00000491541 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.87□□□□□ -0.35
SREBF2-208ENST00000491541 APAF1O14727 1248 aa12.87□□□□□ -0.35
SREBF2-208ENST00000491541 LAMA4Q16363 1823 aa12.86□□□□□ -0.35
SREBF2-208ENST00000491541 VGFO15240 615 aaPredicted RBP12.86□□□□□ -0.35
SREBF2-208ENST00000491541 LMBRD1Q9NUN5 540 aa12.86□□□□□ -0.35
SREBF2-208ENST00000491541 A0A1W2PP64 1363 aa12.86□□□□□ -0.35
SREBF2-208ENST00000491541 PLEKHG2Q9H7P9 1386 aa12.86□□□□□ -0.35
SREBF2-208ENST00000491541 ZBTB7BO15156 539 aaPredicted RBP12.86□□□□□ -0.35
SREBF2-208ENST00000491541 PANK2Q9BZ23 570 aa12.85□□□□□ -0.35
SREBF2-208ENST00000491541 CHGAP10645 457 aaKnown RBP12.85□□□□□ -0.35
SREBF2-208ENST00000491541 CHMP7Q8WUX9 453 aaPredicted RBP12.85□□□□□ -0.35
SREBF2-208ENST00000491541 DNAJC5BQ9UF47 199 aa12.85□□□□□ -0.35
SREBF2-208ENST00000491541 EDC4Q6P2E9 1401 aaKnown RBP12.85□□□□□ -0.35
SREBF2-208ENST00000491541 ZKSCAN2Q63HK3 967 aa12.85□□□□□ -0.35
SREBF2-208ENST00000491541 SOS1Q07889 1333 aaPredicted RBP12.85□□□□□ -0.35
SREBF2-208ENST00000491541 ATF7IPQ6VMQ6 1270 aa12.85□□□□□ -0.35
SREBF2-208ENST00000491541 AOX1Q06278 1338 aa12.85□□□□□ -0.35
SREBF2-208ENST00000491541 EFCAB2Q5VUJ9 269 aa12.84□□□□□ -0.35
SREBF2-208ENST00000491541 OVOS2A0A0J9YW53 1432 aa12.84□□□□□ -0.35
SREBF2-208ENST00000491541 OVOS2Q6IE36 1432 aa12.84□□□□□ -0.35
SREBF2-208ENST00000491541 TMEM94Q12767 1356 aa12.84□□□□□ -0.35
SREBF2-208ENST00000491541 ADGRF5Q8IZF2 1346 aa12.84□□□□□ -0.35
SREBF2-208ENST00000491541 SLC20A2Q08357 652 aa12.84□□□□□ -0.35
SREBF2-208ENST00000491541 UVSSAQ2YD98 709 aa12.84□□□□□ -0.35
SREBF2-208ENST00000491541 RAD50Q92878 1312 aa12.84□□□□□ -0.35
SREBF2-208ENST00000491541 CTIFO43310 598 aaKnown RBP12.84□□□□□ -0.35
SREBF2-208ENST00000491541 TRIM27P14373 513 aa12.84□□□□□ -0.35
SREBF2-208ENST00000491541 HMGN5P82970 282 aaKnown RBP12.84□□□□□ -0.35
SREBF2-208ENST00000491541 CHMP4BQ9H444 224 aaKnown RBP12.84□□□□□ -0.35
SREBF2-208ENST00000491541 GLI3P10071 1580 aa12.83□□□□□ -0.35
SREBF2-208ENST00000491541 K7ELQ4 463 aaPredicted RBP12.83□□□□□ -0.36
SREBF2-208ENST00000491541 OVOS2A0A0G2JMS6 1433 aa12.83□□□□□ -0.36
SREBF2-208ENST00000491541 USP31Q70CQ4 1352 aa12.82□□□□□ -0.36
SREBF2-208ENST00000491541 INTS4Q96HW7 963 aaKnown RBP12.82□□□□□ -0.36
SREBF2-208ENST00000491541 DMTNQ08495 405 aa12.82□□□□□ -0.36
SREBF2-208ENST00000491541 KCNB2Q92953 911 aa12.82□□□□□ -0.36
SREBF2-208ENST00000491541 LAMB4A4D0S4 1761 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 202.9 ms