RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 NME9Q86XW9 330 aa23.11■■□□□ 1.29
PDLIM2-217ENST00000491330 CCER1Q8TC90 406 aaPredicted RBP23.11■■□□□ 1.29
PDLIM2-217ENST00000491330 TESK2Q96S53 571 aa23.11■■□□□ 1.29
PDLIM2-217ENST00000491330 TRIM37O94972 964 aa23.1■■□□□ 1.29
PDLIM2-217ENST00000491330 APBA3O96018 575 aa23.1■■□□□ 1.29
PDLIM2-217ENST00000491330 COG3Q96JB2 828 aa23.1■■□□□ 1.29
PDLIM2-217ENST00000491330 USP47Q96K76 1375 aa23.1■■□□□ 1.29
PDLIM2-217ENST00000491330 CARD10Q9BWT7 1032 aa23.09■■□□□ 1.29
PDLIM2-217ENST00000491330 EN1Q05925 392 aaPredicted RBP23.08■■□□□ 1.29
PDLIM2-217ENST00000491330 AXIN2Q9Y2T1 843 aa23.08■■□□□ 1.29
PDLIM2-217ENST00000491330 THSD7AQ9UPZ6 1657 aa23.07■■□□□ 1.28
PDLIM2-217ENST00000491330 PIK3C2AO00443 1686 aa23.06■■□□□ 1.28
PDLIM2-217ENST00000491330 LMO7Q8WWI1 1683 aa23.06■■□□□ 1.28
PDLIM2-217ENST00000491330 A0A1W2PP64 1363 aa23.06■■□□□ 1.28
PDLIM2-217ENST00000491330 CCDC7Q96M83 1385 aa23.06■■□□□ 1.28
PDLIM2-217ENST00000491330 EXOC5O00471 708 aa23.06■■□□□ 1.28
PDLIM2-217ENST00000491330 NLRP2Q9NX02 1062 aa23.05■■□□□ 1.28
PDLIM2-217ENST00000491330 AKAP12Q02952 1782 aa23.04■■□□□ 1.28
PDLIM2-217ENST00000491330 PARD3Q8TEW0 1356 aa23.04■■□□□ 1.28
PDLIM2-217ENST00000491330 NBPF14Q5TI25 921 aa23.04■■□□□ 1.28
PDLIM2-217ENST00000491330 OVOS2A0A0G2JMS6 1433 aa23.02■■□□□ 1.28
PDLIM2-217ENST00000491330 OVOS2A0A0J9YW53 1432 aa23.02■■□□□ 1.28
PDLIM2-217ENST00000491330 OVOS2Q6IE36 1432 aa23.02■■□□□ 1.28
PDLIM2-217ENST00000491330 CD163L1Q9NR16 1453 aa23.01■■□□□ 1.27
PDLIM2-217ENST00000491330 AMPHP49418 695 aa23.01■■□□□ 1.27
PDLIM2-217ENST00000491330 ABCC6O95255 1503 aa23.01■■□□□ 1.27
PDLIM2-217ENST00000491330 ANKRD36BQ8N2N9 1353 aa23.01■■□□□ 1.27
PDLIM2-217ENST00000491330 DISP2A7MBM2 1401 aa23■■□□□ 1.27
PDLIM2-217ENST00000491330 RGPD1P0DJD0 1748 aa22.99■■□□□ 1.27
PDLIM2-217ENST00000491330 EZH2Q15910 746 aaKnown RBP22.99■■□□□ 1.27
PDLIM2-217ENST00000491330 MON2Q7Z3U7 1717 aa22.99■■□□□ 1.27
PDLIM2-217ENST00000491330 ANKRD24Q8TF21 1146 aa22.98■■□□□ 1.27
PDLIM2-217ENST00000491330 IP6K1Q92551 441 aa22.97■■□□□ 1.27
PDLIM2-217ENST00000491330 ERBB3P21860 1342 aa22.97■■□□□ 1.27
PDLIM2-217ENST00000491330 IL2RBP14784 551 aa22.96■■□□□ 1.27
PDLIM2-217ENST00000491330 CAMKK2Q96RR4 588 aa22.96■■□□□ 1.27
PDLIM2-217ENST00000491330 NFAT5O94916 1531 aa22.96■■□□□ 1.27
PDLIM2-217ENST00000491330 BCL11BQ9C0K0 894 aaPredicted RBP22.95■■□□□ 1.26
PDLIM2-217ENST00000491330 PSDA5PKW4 1024 aaPredicted RBP22.94■■□□□ 1.26
PDLIM2-217ENST00000491330 EIF4G2P78344 907 aaKnown RBP eCLIP22.94■■□□□ 1.26
PDLIM2-217ENST00000491330 R3HDM1Q15032 1099 aaKnown RBP22.93■■□□□ 1.26
PDLIM2-217ENST00000491330 LTV1Q96GA3 475 aaPredicted RBP22.92■■□□□ 1.26
PDLIM2-217ENST00000491330 POLR3GLQ9BT43 218 aa22.92■■□□□ 1.26
PDLIM2-217ENST00000491330 PLSCR1O15162 318 aa22.91■■□□□ 1.26
PDLIM2-217ENST00000491330 MARCH10Q8NA82 808 aaPredicted RBP22.91■■□□□ 1.26
PDLIM2-217ENST00000491330 PARP4Q9UKK3 1724 aaKnown RBP22.91■■□□□ 1.26
PDLIM2-217ENST00000491330 EP400Q96L91 3159 aa22.9■■□□□ 1.26
PDLIM2-217ENST00000491330 FYB1O15117 783 aa22.9■■□□□ 1.26
PDLIM2-217ENST00000491330 GGNBP2Q9H3C7 697 aa22.9■■□□□ 1.26
PDLIM2-217ENST00000491330 COL18A1P39060 1754 aa22.9■■□□□ 1.26
PDLIM2-217ENST00000491330 MAP3K19Q56UN5 1328 aa22.88■■□□□ 1.25
PDLIM2-217ENST00000491330 SMG6Q86US8 1419 aaKnown RBP22.88■■□□□ 1.25
PDLIM2-217ENST00000491330 HOXC9P31274 260 aa22.87■■□□□ 1.25
PDLIM2-217ENST00000491330 BCL9O00512 1426 aa22.86■■□□□ 1.25
PDLIM2-217ENST00000491330 USP54Q70EL1 1684 aa22.86■■□□□ 1.25
PDLIM2-217ENST00000491330 RTL1A6NKG5 1358 aa22.85■■□□□ 1.25
PDLIM2-217ENST00000491330 CGNL1Q0VF96 1302 aa22.84■■□□□ 1.25
PDLIM2-217ENST00000491330 TNS2Q63HR2 1409 aa22.83■■□□□ 1.25
PDLIM2-217ENST00000491330 DDX54Q8TDD1 881 aaKnown RBP22.82■■□□□ 1.24
PDLIM2-217ENST00000491330 RAPGEF4Q8WZA2 1011 aa22.82■■□□□ 1.24
PDLIM2-217ENST00000491330 RRS1Q15050 365 aaKnown RBP22.81■■□□□ 1.24
PDLIM2-217ENST00000491330 TNS1Q9HBL0 1735 aaKnown RBP22.81■■□□□ 1.24
PDLIM2-217ENST00000491330 LRRC37A3O60309 1634 aa22.81■■□□□ 1.24
PDLIM2-217ENST00000491330 KIF24Q5T7B8 1368 aa22.8■■□□□ 1.24
PDLIM2-217ENST00000491330 NSD3Q9BZ95 1437 aa22.79■■□□□ 1.24
PDLIM2-217ENST00000491330 HSPA5P11021 654 aaKnown RBP22.78■■□□□ 1.24
PDLIM2-217ENST00000491330 ACSBG1Q96GR2 724 aa22.78■■□□□ 1.24
PDLIM2-217ENST00000491330 STK32BQ9NY57 414 aa22.78■■□□□ 1.24
PDLIM2-217ENST00000491330 FLT4P35916 1363 aa22.77■■□□□ 1.24
PDLIM2-217ENST00000491330 LTN1O94822 1766 aa22.77■■□□□ 1.24
PDLIM2-217ENST00000491330 PPM1GO15355 546 aaPredicted RBP22.77■■□□□ 1.24
PDLIM2-217ENST00000491330 TATP17735 454 aaPredicted RBP22.77■■□□□ 1.24
PDLIM2-217ENST00000491330 HMGB2P26583 209 aaKnown RBP22.77■■□□□ 1.24
PDLIM2-217ENST00000491330 ZCRB1Q8TBF4 217 aaKnown RBP22.77■■□□□ 1.24
PDLIM2-217ENST00000491330 RGPD5Q99666 1765 aa22.76■■□□□ 1.23
PDLIM2-217ENST00000491330 FBLN1P23142 703 aa22.76■■□□□ 1.23
PDLIM2-217ENST00000491330 CARD14Q9BXL6 1004 aa22.76■■□□□ 1.23
PDLIM2-217ENST00000491330 PPP1R1BQ9UD71 204 aaPredicted RBP22.76■■□□□ 1.23
PDLIM2-217ENST00000491330 TXNRD1Q16881 649 aa22.75■■□□□ 1.23
PDLIM2-217ENST00000491330 SPON1Q9HCB6 807 aa22.75■■□□□ 1.23
PDLIM2-217ENST00000491330 INSRP06213 1382 aa22.75■■□□□ 1.23
PDLIM2-217ENST00000491330 DCAF8L1A6NGE4 600 aa22.73■■□□□ 1.23
PDLIM2-217ENST00000491330 SYTL4Q96C24 671 aaPredicted RBP22.73■■□□□ 1.23
PDLIM2-217ENST00000491330 KCNQ2O43526 872 aa22.72■■□□□ 1.23
PDLIM2-217ENST00000491330 HSP90AB2PQ58FF8 381 aa22.72■■□□□ 1.23
PDLIM2-217ENST00000491330 PEAK1Q9H792 1746 aa22.71■■□□□ 1.23
PDLIM2-217ENST00000491330 NBPF6Q5VWK0 638 aa22.71■■□□□ 1.23
PDLIM2-217ENST00000491330 NBPF4Q96M43 638 aa22.71■■□□□ 1.23
PDLIM2-217ENST00000491330 FAM208AQ9UK61 1670 aaKnown RBP22.71■■□□□ 1.23
PDLIM2-217ENST00000491330 WNK3Q9BYP7 1800 aa22.7■■□□□ 1.22
PDLIM2-217ENST00000491330 PTF1AQ7RTS3 328 aa22.69■■□□□ 1.22
PDLIM2-217ENST00000491330 KNSTRNQ9Y448 316 aa22.69■■□□□ 1.22
PDLIM2-217ENST00000491330 LRP5O75197 1615 aa22.68■■□□□ 1.22
PDLIM2-217ENST00000491330 PANK3Q9H999 370 aa22.68■■□□□ 1.22
PDLIM2-217ENST00000491330 SLC27A3Q5K4L6 730 aa22.67■■□□□ 1.22
PDLIM2-217ENST00000491330 USHBP1Q8N6Y0 703 aa22.67■■□□□ 1.22
PDLIM2-217ENST00000491330 EMILIN1Q9Y6C2 1016 aa22.67■■□□□ 1.22
PDLIM2-217ENST00000491330 WASHC2AQ641Q2 1341 aa22.66■■□□□ 1.22
PDLIM2-217ENST00000491330 PCDH11XQ9BZA7 1347 aa22.66■■□□□ 1.22
PDLIM2-217ENST00000491330 PCDH11YQ9BZA8 1340 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms