RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 NINLQ9Y2I6 1382 aa29.8■■■□□ 2.36
CLIP2-208ENST00000491075 CPSF1Q10570 1443 aaKnown RBP29.79■■■□□ 2.36
CLIP2-208ENST00000491075 WDR17Q8IZU2 1322 aa29.79■■■□□ 2.36
CLIP2-208ENST00000491075 CASZ1Q86V15 1759 aa29.79■■■□□ 2.36
CLIP2-208ENST00000491075 RGPD5Q99666 1765 aa29.79■■■□□ 2.36
CLIP2-208ENST00000491075 EVC2Q86UK5 1308 aa29.77■■■□□ 2.36
CLIP2-208ENST00000491075 YY1P25490 414 aa29.76■■■□□ 2.35
CLIP2-208ENST00000491075 CDCA7Q9BWT1 371 aaPredicted RBP29.76■■■□□ 2.35
CLIP2-208ENST00000491075 BCL11BQ9C0K0 894 aaPredicted RBP29.76■■■□□ 2.35
CLIP2-208ENST00000491075 BCL9O00512 1426 aa29.76■■■□□ 2.35
CLIP2-208ENST00000491075 AXIN2Q9Y2T1 843 aa29.73■■■□□ 2.35
CLIP2-208ENST00000491075 DCAF8L1A6NGE4 600 aa29.72■■■□□ 2.35
CLIP2-208ENST00000491075 KCNH5Q8NCM2 988 aa29.72■■■□□ 2.35
CLIP2-208ENST00000491075 ARHGEF25Q86VW2 580 aa29.71■■■□□ 2.35
CLIP2-208ENST00000491075 ZNF692Q9BU19 519 aaPredicted RBP29.71■■■□□ 2.35
CLIP2-208ENST00000491075 ANO8Q9HCE9 1232 aaPredicted RBP29.71■■■□□ 2.35
CLIP2-208ENST00000491075 ABCC6O95255 1503 aa29.71■■■□□ 2.35
CLIP2-208ENST00000491075 MARCH10Q8NA82 808 aaPredicted RBP29.7■■■□□ 2.35
CLIP2-208ENST00000491075 TTC21BQ7Z4L5 1316 aa29.7■■■□□ 2.34
CLIP2-208ENST00000491075 TTC21AQ8NDW8 1320 aa29.7■■■□□ 2.34
CLIP2-208ENST00000491075 NFAT5O94916 1531 aa29.69■■■□□ 2.34
CLIP2-208ENST00000491075 PTF1AQ7RTS3 328 aa29.68■■■□□ 2.34
CLIP2-208ENST00000491075 L3MBTL2Q969R5 705 aa29.68■■■□□ 2.34
CLIP2-208ENST00000491075 CARD10Q9BWT7 1032 aa29.68■■■□□ 2.34
CLIP2-208ENST00000491075 MON2Q7Z3U7 1717 aa29.66■■■□□ 2.34
CLIP2-208ENST00000491075 CSB-PGBD3P0DP91 1061 aa29.65■■■□□ 2.34
CLIP2-208ENST00000491075 CCDC7Q96M83 1385 aa29.64■■■□□ 2.34
CLIP2-208ENST00000491075 MYOM1P52179 1685 aa29.64■■■□□ 2.34
CLIP2-208ENST00000491075 ROCK2O75116 1388 aaKnown RBP29.64■■■□□ 2.33
CLIP2-208ENST00000491075 TNS2Q63HR2 1409 aa29.63■■■□□ 2.33
CLIP2-208ENST00000491075 SOX12O15370 315 aa29.63■■■□□ 2.33
CLIP2-208ENST00000491075 PROM2Q8N271 834 aa29.63■■■□□ 2.33
CLIP2-208ENST00000491075 NHSQ6T4R5 1651 aa29.62■■■□□ 2.33
CLIP2-208ENST00000491075 USP54Q70EL1 1684 aa29.62■■■□□ 2.33
CLIP2-208ENST00000491075 KTN1Q86UP2 1357 aaKnown RBP29.61■■■□□ 2.33
CLIP2-208ENST00000491075 EXOC5O00471 708 aa29.6■■■□□ 2.33
CLIP2-208ENST00000491075 TXNRD1Q16881 649 aa29.59■■■□□ 2.33
CLIP2-208ENST00000491075 PDGFDQ9GZP0 370 aaPredicted RBP29.59■■■□□ 2.33
CLIP2-208ENST00000491075 STK32BQ9NY57 414 aa29.58■■■□□ 2.33
CLIP2-208ENST00000491075 LTN1O94822 1766 aa29.57■■■□□ 2.32
CLIP2-208ENST00000491075 ZBTB7AO95365 584 aa29.57■■■□□ 2.32
CLIP2-208ENST00000491075 PTGER2P43116 358 aa29.54■■■□□ 2.32
CLIP2-208ENST00000491075 SLC15A2Q16348 729 aa29.54■■■□□ 2.32
CLIP2-208ENST00000491075 SBNO2Q9Y2G9 1366 aa29.53■■■□□ 2.32
CLIP2-208ENST00000491075 USP31Q70CQ4 1352 aa29.52■■■□□ 2.32
CLIP2-208ENST00000491075 ERBB3P21860 1342 aa29.5■■■□□ 2.31
CLIP2-208ENST00000491075 PAPPAQ13219 1627 aa29.5■■■□□ 2.31
CLIP2-208ENST00000491075 SIN3AQ96ST3 1273 aa29.5■■■□□ 2.31
CLIP2-208ENST00000491075 ATF5Q9Y2D1 282 aaPredicted RBP29.5■■■□□ 2.31
CLIP2-208ENST00000491075 BTAF1O14981 1849 aa29.5■■■□□ 2.31
CLIP2-208ENST00000491075 MTFR1LQ9H019 292 aa29.48■■■□□ 2.31
CLIP2-208ENST00000491075 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.47■■■□□ 2.31
CLIP2-208ENST00000491075 CD163L1Q9NR16 1453 aa29.47■■■□□ 2.31
CLIP2-208ENST00000491075 NLRP2Q9NX02 1062 aa29.45■■■□□ 2.31
CLIP2-208ENST00000491075 IL2RBP14784 551 aa29.44■■■□□ 2.3
CLIP2-208ENST00000491075 NEUROD1Q13562 356 aa29.44■■■□□ 2.3
CLIP2-208ENST00000491075 FHDC1Q9C0D6 1143 aaPredicted RBP29.44■■■□□ 2.3
CLIP2-208ENST00000491075 CHD4Q14839 1912 aa29.43■■■□□ 2.3
CLIP2-208ENST00000491075 NME9Q86XW9 330 aa29.43■■■□□ 2.3
CLIP2-208ENST00000491075 ACSBG1Q96GR2 724 aa29.43■■■□□ 2.3
CLIP2-208ENST00000491075 KAT6BQ8WYB5 2073 aa29.42■■■□□ 2.3
CLIP2-208ENST00000491075 FAM208AQ9UK61 1670 aaKnown RBP29.42■■■□□ 2.3
CLIP2-208ENST00000491075 SGIP1Q9BQI5 828 aa29.42■■■□□ 2.3
CLIP2-208ENST00000491075 SYT17Q9BSW7 474 aa29.42■■■□□ 2.3
CLIP2-208ENST00000491075 EDC4Q6P2E9 1401 aaKnown RBP29.41■■■□□ 2.3
CLIP2-208ENST00000491075 UTRNP46939 3433 aa29.41■■■□□ 2.3
CLIP2-208ENST00000491075 HDGFL2Q7Z4V5 671 aaPredicted RBP29.4■■■□□ 2.3
CLIP2-208ENST00000491075 ANKRD24Q8TF21 1146 aa29.39■■■□□ 2.3
CLIP2-208ENST00000491075 QSER1Q2KHR3 1735 aa29.38■■■□□ 2.29
CLIP2-208ENST00000491075 TMC1Q8TDI8 760 aa29.37■■■□□ 2.29
CLIP2-208ENST00000491075 MAP3K5Q99683 1374 aa29.36■■■□□ 2.29
CLIP2-208ENST00000491075 CARD11Q9BXL7 1154 aa29.35■■■□□ 2.29
CLIP2-208ENST00000491075 ZNF784Q8NCA9 323 aaPredicted RBP29.34■■■□□ 2.29
CLIP2-208ENST00000491075 ARXQ96QS3 562 aa29.34■■■□□ 2.29
CLIP2-208ENST00000491075 TERF2IPQ9NYB0 399 aa29.33■■■□□ 2.29
CLIP2-208ENST00000491075 A0A1W2PP64 1363 aa29.33■■■□□ 2.29
CLIP2-208ENST00000491075 SLC12A5Q9H2X9 1139 aa29.32■■■□□ 2.28
CLIP2-208ENST00000491075 ZNF827Q17R98 1081 aa29.31■■■□□ 2.28
CLIP2-208ENST00000491075 COL24A1Q17RW2 1714 aa29.29■■■□□ 2.28
CLIP2-208ENST00000491075 LRRC4BQ9NT99 713 aa29.29■■■□□ 2.28
CLIP2-208ENST00000491075 IP6K1Q92551 441 aa29.28■■■□□ 2.28
CLIP2-208ENST00000491075 PUS7Q96PZ0 661 aaKnown RBP29.28■■■□□ 2.28
CLIP2-208ENST00000491075 DOT1LQ8TEK3 1739 aa29.28■■■□□ 2.28
CLIP2-208ENST00000491075 TUBGCP6Q96RT7 1819 aa29.27■■■□□ 2.28
CLIP2-208ENST00000491075 SLC27A3Q5K4L6 730 aa29.27■■■□□ 2.28
CLIP2-208ENST00000491075 SLC16A10Q8TF71 515 aa29.25■■■□□ 2.27
CLIP2-208ENST00000491075 AKT1S1Q96B36 256 aa29.25■■■□□ 2.27
CLIP2-208ENST00000491075 LY75O60449 1722 aa29.25■■■□□ 2.27
CLIP2-208ENST00000491075 SHANK3Q9BYB0 1731 aa29.24■■■□□ 2.27
CLIP2-208ENST00000491075 DDX54Q8TDD1 881 aaKnown RBP29.23■■■□□ 2.27
CLIP2-208ENST00000491075 RGPD2P0DJD1 1756 aa29.21■■■□□ 2.27
CLIP2-208ENST00000491075 LTV1Q96GA3 475 aaPredicted RBP29.21■■■□□ 2.27
CLIP2-208ENST00000491075 ANKRD36BQ8N2N9 1353 aa29.21■■■□□ 2.27
CLIP2-208ENST00000491075 POLD1P28340 1107 aa29.19■■■□□ 2.26
CLIP2-208ENST00000491075 PNPLA7Q6ZV29 1317 aa29.19■■■□□ 2.26
CLIP2-208ENST00000491075 TONSLQ96HA7 1378 aa29.18■■■□□ 2.26
CLIP2-208ENST00000491075 COG3Q96JB2 828 aa29.18■■■□□ 2.26
CLIP2-208ENST00000491075 GPR162Q16538 588 aa29.17■■■□□ 2.26
CLIP2-208ENST00000491075 SYTL4Q96C24 671 aaPredicted RBP29.17■■■□□ 2.26
CLIP2-208ENST00000491075 MAP3K19Q56UN5 1328 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms