RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SLC4A2P04920 1241 aa9.08□□□□□ -0.96
NPHP3-208ENST00000490993 TRIM27P14373 513 aa9.08□□□□□ -0.96
NPHP3-208ENST00000490993 RPAP2Q8IXW5 612 aaPredicted RBP9.08□□□□□ -0.96
NPHP3-208ENST00000490993 TRMT2AQ8IZ69 625 aaKnown RBP9.08□□□□□ -0.96
NPHP3-208ENST00000490993 TTC5Q8N0Z6 440 aa9.08□□□□□ -0.96
NPHP3-208ENST00000490993 QRICH2Q9H0J4 1663 aa9.08□□□□□ -0.96
NPHP3-208ENST00000490993 EIF2S2P20042 333 aaKnown RBP9.08□□□□□ -0.96
NPHP3-208ENST00000490993 L1TD1Q5T7N2 865 aaKnown RBP9.08□□□□□ -0.96
NPHP3-208ENST00000490993 C22orf23Q9BZE7 217 aa9.08□□□□□ -0.96
NPHP3-208ENST00000490993 A2ML1A8K2U0 1454 aa9.07□□□□□ -0.96
NPHP3-208ENST00000490993 ST18O60284 1047 aa9.07□□□□□ -0.96
NPHP3-208ENST00000490993 CDC45O75419 566 aa9.07□□□□□ -0.96
NPHP3-208ENST00000490993 NEXNQ0ZGT2 675 aa9.07□□□□□ -0.96
NPHP3-208ENST00000490993 RSPH6AQ9H0K4 717 aa9.07□□□□□ -0.96
NPHP3-208ENST00000490993 SLKQ9H2G2 1235 aaPredicted RBP9.07□□□□□ -0.96
NPHP3-208ENST00000490993 TRIM6-TRIM34B2RNG4 842 aa9.07□□□□□ -0.96
NPHP3-208ENST00000490993 HTATSF1O43719 755 aaKnown RBP9.07□□□□□ -0.96
NPHP3-208ENST00000490993 INTS3Q68E01 1043 aaKnown RBP9.07□□□□□ -0.96
NPHP3-208ENST00000490993 PTPRCP08575 1304 aa9.07□□□□□ -0.96
NPHP3-208ENST00000490993 PLEKHG3A1L390 1219 aa9.07□□□□□ -0.96
NPHP3-208ENST00000490993 KCNJ4P48050 445 aa9.07□□□□□ -0.96
NPHP3-208ENST00000490993 RIMBP3CA6NJZ7 1639 aa9.07□□□□□ -0.96
NPHP3-208ENST00000490993 RIMBP3BA6NNM3 1639 aa9.07□□□□□ -0.96
NPHP3-208ENST00000490993 RIMBP3Q9UFD9 1639 aa9.07□□□□□ -0.96
NPHP3-208ENST00000490993 CHD1LQ86WJ1 897 aa9.07□□□□□ -0.96
NPHP3-208ENST00000490993 GNAI2P04899 355 aa9.06□□□□□ -0.96
NPHP3-208ENST00000490993 ARXQ96QS3 562 aa9.06□□□□□ -0.96
NPHP3-208ENST00000490993 FLT4P35916 1363 aa9.06□□□□□ -0.96
NPHP3-208ENST00000490993 AATKQ6ZMQ8 1374 aa9.06□□□□□ -0.96
NPHP3-208ENST00000490993 MBIPQ9NS73 344 aa9.06□□□□□ -0.96
NPHP3-208ENST00000490993 NEXMIFQ5QGS0 1516 aa9.06□□□□□ -0.96
NPHP3-208ENST00000490993 A0A0G2JS52 829 aa9.06□□□□□ -0.96
NPHP3-208ENST00000490993 HDAC1Q13547 482 aaPredicted RBP9.06□□□□□ -0.96
NPHP3-208ENST00000490993 AMOTQ4VCS5 1084 aa9.06□□□□□ -0.96
NPHP3-208ENST00000490993 ALKQ9UM73 1620 aa9.06□□□□□ -0.96
NPHP3-208ENST00000490993 UBTFL1P0CB47 393 aaPredicted RBP9.06□□□□□ -0.96
NPHP3-208ENST00000490993 THUMPD2Q9BTF0 503 aaKnown RBP9.06□□□□□ -0.96
NPHP3-208ENST00000490993 C9orf78Q9NZ63 289 aaPredicted RBP9.06□□□□□ -0.96
NPHP3-208ENST00000490993 IL13P35225 146 aa9.05□□□□□ -0.96
NPHP3-208ENST00000490993 EIF4A2Q14240 407 aaKnown RBP9.05□□□□□ -0.96
NPHP3-208ENST00000490993 SPRYD3Q8NCJ5 442 aa9.05□□□□□ -0.96
NPHP3-208ENST00000490993 SPINK5Q9NQ38 1064 aaPredicted RBP9.05□□□□□ -0.96
NPHP3-208ENST00000490993 NLRP2Q9NX02 1062 aa9.05□□□□□ -0.96
NPHP3-208ENST00000490993 TATP17735 454 aaPredicted RBP9.05□□□□□ -0.96
NPHP3-208ENST00000490993 ZNF530Q6P9A1 599 aaPredicted RBP9.05□□□□□ -0.96
NPHP3-208ENST00000490993 MCM10Q7L590 875 aa9.05□□□□□ -0.96
NPHP3-208ENST00000490993 MED14O60244 1454 aa9.04□□□□□ -0.96
NPHP3-208ENST00000490993 TAF7Q15545 349 aaPredicted RBP9.04□□□□□ -0.96
NPHP3-208ENST00000490993 HDGFL1Q5TGJ6 251 aa9.04□□□□□ -0.96
NPHP3-208ENST00000490993 FRMPD1Q5SYB0 1578 aa9.04□□□□□ -0.96
NPHP3-208ENST00000490993 METP08581 1390 aa9.04□□□□□ -0.96
NPHP3-208ENST00000490993 NECTIN2Q92692 538 aa9.04□□□□□ -0.96
NPHP3-208ENST00000490993 MROH1Q8NDA8 1641 aa9.04□□□□□ -0.96
NPHP3-208ENST00000490993 SPG7Q9UQ90 795 aa9.04□□□□□ -0.96
NPHP3-208ENST00000490993 DLC1Q96QB1 1528 aa9.04□□□□□ -0.96
NPHP3-208ENST00000490993 DDX11L8A8MPP1 907 aa9.03□□□□□ -0.96
NPHP3-208ENST00000490993 EVA1CP58658 441 aa9.03□□□□□ -0.96
NPHP3-208ENST00000490993 IGHDP01880 384 aa9.03□□□□□ -0.96
NPHP3-208ENST00000490993 SLC4A3P48751 1232 aa9.03□□□□□ -0.96
NPHP3-208ENST00000490993 DCTN1Q14203 1278 aa9.03□□□□□ -0.96
NPHP3-208ENST00000490993 CHMP5Q9NZZ3 219 aa9.03□□□□□ -0.96
NPHP3-208ENST00000490993 TRIM35Q9UPQ4 493 aa9.03□□□□□ -0.96
NPHP3-208ENST00000490993 SOS1Q07889 1333 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-208ENST00000490993 MRPL50Q8N5N7 158 aaKnown RBP9.03□□□□□ -0.96
NPHP3-208ENST00000490993 SBNO1A3KN83 1393 aa9.03□□□□□ -0.96
NPHP3-208ENST00000490993 KDM2BQ8NHM5 1336 aa9.03□□□□□ -0.96
NPHP3-208ENST00000490993 DIP2BQ9P265 1576 aa9.03□□□□□ -0.96
NPHP3-208ENST00000490993 HSP90AB2PQ58FF8 381 aa9.02□□□□□ -0.96
NPHP3-208ENST00000490993 RUFY2Q8WXA3 655 aa9.02□□□□□ -0.96
NPHP3-208ENST00000490993 C1orf115Q9H7X2 142 aa9.02□□□□□ -0.96
NPHP3-208ENST00000490993 ZRANB1Q9UGI0 708 aa9.02□□□□□ -0.96
NPHP3-208ENST00000490993 PIK3C2BO00750 1634 aa9.02□□□□□ -0.96
NPHP3-208ENST00000490993 PRKCSHP14314 528 aaPredicted RBP9.02□□□□□ -0.97
NPHP3-208ENST00000490993 FBLN1P23142 703 aa9.02□□□□□ -0.97
NPHP3-208ENST00000490993 LTKP29376 864 aa9.02□□□□□ -0.97
NPHP3-208ENST00000490993 RILPL2Q969X0 211 aa9.02□□□□□ -0.97
NPHP3-208ENST00000490993 SRCIN1Q9C0H9 1055 aa9.02□□□□□ -0.97
NPHP3-208ENST00000490993 ERC2O15083 957 aa9.01□□□□□ -0.97
NPHP3-208ENST00000490993 PLEKHF1Q96S99 279 aa9.01□□□□□ -0.97
NPHP3-208ENST00000490993 PPLO60437 1756 aa9.01□□□□□ -0.97
NPHP3-208ENST00000490993 ADGRB1O14514 1584 aa9.01□□□□□ -0.97
NPHP3-208ENST00000490993 BTBD11A6QL63 1104 aa9.01□□□□□ -0.97
NPHP3-208ENST00000490993 VAMP4O75379 141 aa9.01□□□□□ -0.97
NPHP3-208ENST00000490993 TRIM44Q96DX7 344 aaPredicted RBP9.01□□□□□ -0.97
NPHP3-208ENST00000490993 TULP4Q9NRJ4 1543 aa9.01□□□□□ -0.97
NPHP3-208ENST00000490993 PREX1Q8TCU6 1659 aa9.01□□□□□ -0.97
NPHP3-208ENST00000490993 ARHGEF40Q8TER5 1519 aa9.01□□□□□ -0.97
NPHP3-208ENST00000490993 CLTCQ00610 1675 aaKnown RBP9.01□□□□□ -0.97
NPHP3-208ENST00000490993 KCNA6P17658 529 aa9.01□□□□□ -0.97
NPHP3-208ENST00000490993 PHACTR3Q96KR7 559 aa9.01□□□□□ -0.97
NPHP3-208ENST00000490993 PIK3R4Q99570 1358 aa9.01□□□□□ -0.97
NPHP3-208ENST00000490993 G3BP1Q13283 466 aaKnown RBP eCLIP9.01□□□□□ -0.97
NPHP3-208ENST00000490993 ERC1Q8IUD2 1116 aa9.01□□□□□ -0.97
NPHP3-208ENST00000490993 ARHGEF10O15013 1369 aa9□□□□□ -0.97
NPHP3-208ENST00000490993 SKOR2Q2VWA4 1001 aaPredicted RBP9□□□□□ -0.97
NPHP3-208ENST00000490993 BABAM1Q9NWV8 329 aa9□□□□□ -0.97
NPHP3-208ENST00000490993 MROH2AA6NES4 1674 aa9□□□□□ -0.97
NPHP3-208ENST00000490993 IFIT2P09913 472 aaKnown RBP9□□□□□ -0.97
NPHP3-208ENST00000490993 RIC3Q7Z5B4 369 aa9□□□□□ -0.97
NPHP3-208ENST00000490993 PCDHB15Q9Y5E8 787 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 185.1 ms