RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-212ENST00000490723 SMCPP49901 116 aaPredicted RBP9.07□□□□□ -0.96
PHC3-212ENST00000490723 WDR4P57081 412 aaKnown RBP9.07□□□□□ -0.96
PHC3-212ENST00000490723 RAB15P59190 212 aa9.07□□□□□ -0.96
PHC3-212ENST00000490723 IRF5Q13568 498 aa9.07□□□□□ -0.96
PHC3-212ENST00000490723 CRIPAKQ8N1N5 446 aa9.07□□□□□ -0.96
PHC3-212ENST00000490723 UBTFP17480 764 aaKnown RBP9.06□□□□□ -0.96
PHC3-212ENST00000490723 NBPF20Q3BBV1 942 aa9.06□□□□□ -0.96
PHC3-212ENST00000490723 POM121Q96HA1 1249 aa9.06□□□□□ -0.96
PHC3-212ENST00000490723 COG6Q9Y2V7 657 aa9.06□□□□□ -0.96
PHC3-212ENST00000490723 ZNF330Q9Y3S2 320 aaPredicted RBP9.06□□□□□ -0.96
PHC3-212ENST00000490723 ZIC2O95409 532 aaPredicted RBP9.05□□□□□ -0.96
PHC3-212ENST00000490723 CCDC116Q8IYX3 515 aa9.05□□□□□ -0.96
PHC3-212ENST00000490723 ZFAND3Q9H8U3 227 aa9.05□□□□□ -0.96
PHC3-212ENST00000490723 RAD21O60216 631 aa9.04□□□□□ -0.96
PHC3-212ENST00000490723 TIMP2P16035 220 aa9.04□□□□□ -0.96
PHC3-212ENST00000490723 VAC14Q08AM6 782 aa9.04□□□□□ -0.96
PHC3-212ENST00000490723 INTS6LQ5JSJ4 861 aaKnown RBP9.04□□□□□ -0.96
PHC3-212ENST00000490723 ITPKCQ96DU7 683 aa9.04□□□□□ -0.96
PHC3-212ENST00000490723 KLF16Q9BXK1 252 aaPredicted RBP9.03□□□□□ -0.96
PHC3-212ENST00000490723 GIGYF1O75420 1035 aaPredicted RBP9.02□□□□□ -0.97
PHC3-212ENST00000490723 BMP1P13497 986 aa9.02□□□□□ -0.97
PHC3-212ENST00000490723 PPP1R26Q5T8A7 1209 aaPredicted RBP9.02□□□□□ -0.97
PHC3-212ENST00000490723 EMILIN1Q9Y6C2 1016 aa9.02□□□□□ -0.97
PHC3-212ENST00000490723 ATP13A2Q9NQ11 1180 aa9.01□□□□□ -0.97
PHC3-212ENST00000490723 POTECB2RU33 542 aa9□□□□□ -0.97
PHC3-212ENST00000490723 EIF4G2P78344 907 aaKnown RBP eCLIP9□□□□□ -0.97
PHC3-212ENST00000490723 DHX9Q08211 1270 aaKnown RBP9□□□□□ -0.97
PHC3-212ENST00000490723 TMPRSS4Q9NRS4 437 aa9□□□□□ -0.97
PHC3-212ENST00000490723 PGPEP1Q9NXJ5 209 aa9□□□□□ -0.97
PHC3-212ENST00000490723 ESPNB1AK53 854 aa8.99□□□□□ -0.97
PHC3-212ENST00000490723 ERVH48-1M5A8F1 160 aa8.99□□□□□ -0.97
PHC3-212ENST00000490723 MCCD1P59942 119 aaPredicted RBP8.99□□□□□ -0.97
PHC3-212ENST00000490723 WASHC4Q2M389 1173 aa8.99□□□□□ -0.97
PHC3-212ENST00000490723 ZNF787Q6DD87 383 aa8.99□□□□□ -0.97
PHC3-212ENST00000490723 WWC1Q8IX03 1113 aa8.99□□□□□ -0.97
PHC3-212ENST00000490723 ZNF592Q92610 1267 aa8.99□□□□□ -0.97
PHC3-212ENST00000490723 CLUAP1Q96AJ1 413 aa8.99□□□□□ -0.97
PHC3-212ENST00000490723 GMPR2Q9P2T1 348 aaKnown RBP8.99□□□□□ -0.97
PHC3-212ENST00000490723 TRIM46Q7Z4K8 759 aa8.98□□□□□ -0.97
PHC3-212ENST00000490723 CBLBQ13191 982 aa8.97□□□□□ -0.97
PHC3-212ENST00000490723 MRPL14Q6P1L8 145 aaKnown RBP8.96□□□□□ -0.98
PHC3-212ENST00000490723 SEPT12Q8IYM1 358 aa8.96□□□□□ -0.98
PHC3-212ENST00000490723 ZNF784Q8NCA9 323 aaPredicted RBP8.96□□□□□ -0.98
PHC3-212ENST00000490723 CEP126Q9P2H0 1117 aa8.96□□□□□ -0.98
PHC3-212ENST00000490723 C11orf95C9JLR9 678 aaPredicted RBP8.95□□□□□ -0.98
PHC3-212ENST00000490723 SEMA3FQ13275 785 aa8.95□□□□□ -0.98
PHC3-212ENST00000490723 C6orf118Q5T5N4 469 aa8.95□□□□□ -0.98
PHC3-212ENST00000490723 RNF20Q5VTR2 975 aa8.95□□□□□ -0.98
PHC3-212ENST00000490723 PURBQ96QR8 312 aaKnown RBP8.95□□□□□ -0.98
PHC3-212ENST00000490723 SCARF1Q14162 830 aa8.94□□□□□ -0.98
PHC3-212ENST00000490723 MEIOBQ8N635 442 aa8.94□□□□□ -0.98
PHC3-212ENST00000490723 ZFP42Q96MM3 310 aa8.94□□□□□ -0.98
PHC3-212ENST00000490723 CYLDQ9NQC7 956 aa8.94□□□□□ -0.98
PHC3-212ENST00000490723 UPP2O95045 317 aa8.93□□□□□ -0.98
PHC3-212ENST00000490723 SENP2Q9HC62 589 aa8.93□□□□□ -0.98
PHC3-212ENST00000490723 PCDHB11Q9Y5F2 797 aa8.93□□□□□ -0.98
PHC3-212ENST00000490723 GTF3C3Q9Y5Q9 886 aa8.93□□□□□ -0.98
PHC3-212ENST00000490723 POM121CA8CG34 1229 aa8.92□□□□□ -0.98
PHC3-212ENST00000490723 BMP2P12643 396 aa8.92□□□□□ -0.98
PHC3-212ENST00000490723 SLFNL1Q499Z3 407 aa8.92□□□□□ -0.98
PHC3-212ENST00000490723 LINC00528Q8N1L1 170 aa8.92□□□□□ -0.98
PHC3-212ENST00000490723 AGBL1Q96MI9 1066 aa8.92□□□□□ -0.98
PHC3-212ENST00000490723 LILRA1O75019 489 aa8.91□□□□□ -0.98
PHC3-212ENST00000490723 SNRPBP14678 240 aaKnown RBP8.91□□□□□ -0.98
PHC3-212ENST00000490723 ADD1P35611 737 aaKnown RBP8.91□□□□□ -0.98
PHC3-212ENST00000490723 SOX11P35716 441 aa8.91□□□□□ -0.98
PHC3-212ENST00000490723 Q6ZVU0 165 aa8.91□□□□□ -0.98
PHC3-212ENST00000490723 PROSER2Q86WR7 435 aaPredicted RBP8.91□□□□□ -0.98
PHC3-212ENST00000490723 TRIM47Q96LD4 638 aa8.91□□□□□ -0.98
PHC3-212ENST00000490723 RELBQ01201 579 aa8.9□□□□□ -0.98
PHC3-212ENST00000490723 RNF135Q8IUD6 432 aa8.9□□□□□ -0.98
PHC3-212ENST00000490723 KIFC2Q96AC6 838 aa8.9□□□□□ -0.98
PHC3-212ENST00000490723 CCDC85AQ96PX6 553 aaPredicted RBP8.9□□□□□ -0.98
PHC3-212ENST00000490723 TSEN34Q9BSV6 310 aaKnown RBP8.9□□□□□ -0.98
PHC3-212ENST00000490723 TSGA10IPQ3SY00 556 aa8.89□□□□□ -0.99
PHC3-212ENST00000490723 CCDC125Q86Z20 511 aa8.89□□□□□ -0.99
PHC3-212ENST00000490723 CDCA7Q9BWT1 371 aaPredicted RBP8.89□□□□□ -0.99
PHC3-212ENST00000490723 ADH1AP07327 375 aa8.88□□□□□ -0.99
PHC3-212ENST00000490723 SCTRP47872 440 aa8.88□□□□□ -0.99
PHC3-212ENST00000490723 CC2D2BQ6DHV5 1058 aa8.88□□□□□ -0.99
PHC3-212ENST00000490723 PHTF2Q8N3S3 785 aa8.88□□□□□ -0.99
PHC3-212ENST00000490723 TRIM52Q96A61 297 aa8.88□□□□□ -0.99
PHC3-212ENST00000490723 ESF1Q9H501 851 aaKnown RBP8.88□□□□□ -0.99
PHC3-212ENST00000490723 ALG2Q9H553 416 aa8.88□□□□□ -0.99
PHC3-212ENST00000490723 ZNF395Q9H8N7 513 aaPredicted RBP8.88□□□□□ -0.99
PHC3-212ENST00000490723 FNBP4Q8N3X1 1017 aaPredicted RBP8.87□□□□□ -0.99
PHC3-212ENST00000490723 DOLKQ9UPQ8 538 aa8.87□□□□□ -0.99
PHC3-212ENST00000490723 A6NJR5 290 aa8.86□□□□□ -0.99
PHC3-212ENST00000490723 ERVK-9P63128 1117 aa8.86□□□□□ -0.99
PHC3-212ENST00000490723 HDGFL1Q5TGJ6 251 aa8.86□□□□□ -0.99
PHC3-212ENST00000490723 SOBPA7XYQ1 873 aa8.85□□□□□ -0.99
PHC3-212ENST00000490723 PIK3CDO00329 1044 aa8.85□□□□□ -0.99
PHC3-212ENST00000490723 OXLD1Q5BKU9 147 aa8.85□□□□□ -0.99
PHC3-212ENST00000490723 ADAMTS19Q8TE59 1207 aa8.85□□□□□ -0.99
PHC3-212ENST00000490723 ATP5J2-PTCD1G3V325 749 aa8.84□□□□□ -0.99
PHC3-212ENST00000490723 MYCP01106 439 aaPredicted RBP8.84□□□□□ -0.99
PHC3-212ENST00000490723 PTGIRP43119 386 aa8.84□□□□□ -0.99
PHC3-212ENST00000490723 KDF1Q8NAX2 398 aaPredicted RBP8.84□□□□□ -0.99
PHC3-212ENST00000490723 INSM2Q96T92 566 aaPredicted RBP8.84□□□□□ -0.99
PHC3-212ENST00000490723 SPINT1O43278 529 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms